RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
LINC00404-201ENST00000418660 HHLA3Q9XRX5 114 aa11.38□□□□□ -0.59
LINC00404-201ENST00000418660 ICOSQ9Y6W8 199 aa11.38□□□□□ -0.59
LINC00404-201ENST00000418660 DNAH17Q9UFH2 4485 aa11.37□□□□□ -0.59
LINC00404-201ENST00000418660 IGLV2-11P01706 119 aa11.37□□□□□ -0.59
LINC00404-201ENST00000418660 TYMSP04818 313 aa11.37□□□□□ -0.59
LINC00404-201ENST00000418660 FLI1Q01543 452 aaPredicted RBP11.37□□□□□ -0.59
LINC00404-201ENST00000418660 TMEM75Q8N9X5 138 aa11.37□□□□□ -0.59
LINC00404-201ENST00000418660 C8orf49Q96NF6 230 aa11.37□□□□□ -0.59
LINC00404-201ENST00000418660 TRGV4A0A0C4DH28 118 aa11.36□□□□□ -0.59
LINC00404-201ENST00000418660 SMLR1H3BR10 107 aa11.36□□□□□ -0.59
LINC00404-201ENST00000418660 M0R2P5 195 aa11.36□□□□□ -0.59
LINC00404-201ENST00000418660 ZNF80P51504 273 aaPredicted RBP11.36□□□□□ -0.59
LINC00404-201ENST00000418660 TTC32Q5I0X7 151 aa11.36□□□□□ -0.59
LINC00404-201ENST00000418660 PRNTQ86SH4 94 aa11.36□□□□□ -0.59
LINC00404-201ENST00000418660 ZNF479Q96JC4 524 aa11.36□□□□□ -0.59
LINC00404-201ENST00000418660 GCGP01275 180 aa11.35□□□□□ -0.59
LINC00404-201ENST00000418660 SFTA3P0C7M3 94 aa11.35□□□□□ -0.59
LINC00404-201ENST00000418660 MRPL23Q16540 153 aaKnown RBP11.35□□□□□ -0.59
LINC00404-201ENST00000418660 SMUG1Q53HV7 270 aa11.35□□□□□ -0.59
LINC00404-201ENST00000418660 SAPCD1Q5SSQ6 148 aa11.35□□□□□ -0.59
LINC00404-201ENST00000418660 MUC4Q99102 2169 aa11.35□□□□□ -0.59
LINC00404-201ENST00000418660 TRAV4A0A0B4J268 109 aa11.34□□□□□ -0.59
LINC00404-201ENST00000418660 A0A1W2PPQ1 181 aa11.34□□□□□ -0.59
LINC00404-201ENST00000418660 IFNA7P01567 189 aa11.34□□□□□ -0.59
LINC00404-201ENST00000418660 PFN1P07737 140 aaKnown RBP11.34□□□□□ -0.59
LINC00404-201ENST00000418660 FGF8P55075 233 aaPredicted RBP11.34□□□□□ -0.59
LINC00404-201ENST00000418660 ZNF345Q14585 488 aa11.34□□□□□ -0.59
LINC00404-201ENST00000418660 ZFP69Q49AA0 526 aa11.34□□□□□ -0.59
LINC00404-201ENST00000418660 KCNRGQ8N5I3 272 aa11.34□□□□□ -0.59
LINC00404-201ENST00000418660 NKX6-2Q9C056 277 aaPredicted RBP11.34□□□□□ -0.59
LINC00404-201ENST00000418660 C11orf21Q9P2W6 132 aa11.34□□□□□ -0.59
LINC00404-201ENST00000418660 FAM74A7A6NL05 159 aa11.33□□□□□ -0.6
LINC00404-201ENST00000418660 PPT1P50897 306 aa11.33□□□□□ -0.6
LINC00404-201ENST00000418660 UBE2G2P60604 165 aa11.33□□□□□ -0.6
LINC00404-201ENST00000418660 OR4C5Q8NGB2 326 aa11.33□□□□□ -0.6
LINC00404-201ENST00000418660 LINC00479Q96M42 142 aa11.33□□□□□ -0.6
LINC00404-201ENST00000418660 KRTAP1-5Q9BYS1 174 aa11.33□□□□□ -0.6
LINC00404-201ENST00000418660 TRAV34A0A0B4J273 112 aa11.32□□□□□ -0.6
LINC00404-201ENST00000418660 MAP1LC3B2A6NCE7 125 aa11.32□□□□□ -0.6
LINC00404-201ENST00000418660 HMSDA8MTL9 139 aa11.32□□□□□ -0.6
LINC00404-201ENST00000418660 TNP2Q05952 138 aa11.32□□□□□ -0.6
LINC00404-201ENST00000418660 NEGR1Q7Z3B1 354 aa11.32□□□□□ -0.6
LINC00404-201ENST00000418660 HIST1H2BAQ96A08 127 aa11.32□□□□□ -0.6
LINC00404-201ENST00000418660 MAP1LC3BQ9GZQ8 125 aa11.32□□□□□ -0.6
LINC00404-201ENST00000418660 PEX7O00628 323 aa11.31□□□□□ -0.6
LINC00404-201ENST00000418660 SIVA1O15304 175 aa11.31□□□□□ -0.6
LINC00404-201ENST00000418660 ORM1P02763 201 aa11.31□□□□□ -0.6
LINC00404-201ENST00000418660 BTF3P20290 206 aaKnown RBP11.31□□□□□ -0.6
LINC00404-201ENST00000418660 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
LINC00404-201ENST00000418660 OR11H4Q8NGC9 324 aa11.31□□□□□ -0.6
LINC00404-201ENST00000418660 STOML3Q8TAV4 291 aa11.31□□□□□ -0.6
LINC00404-201ENST00000418660 PCNPQ8WW12 178 aaKnown RBP11.31□□□□□ -0.6
LINC00404-201ENST00000418660 ARL2-SNX15V9GYD0 113 aa11.31□□□□□ -0.6
LINC00404-201ENST00000418660 A0A0D9SG52 128 aa11.3□□□□□ -0.6
LINC00404-201ENST00000418660 K7EQD1 137 aa11.3□□□□□ -0.6
LINC00404-201ENST00000418660 NXPH4O95158 308 aa11.3□□□□□ -0.6
LINC00404-201ENST00000418660 SEC11BP0C7V7 166 aa11.3□□□□□ -0.6
LINC00404-201ENST00000418660 GYPEP15421 78 aa11.3□□□□□ -0.6
LINC00404-201ENST00000418660 SRIP30626 198 aa11.3□□□□□ -0.6
LINC00404-201ENST00000418660 ZNF876PQ49A33 203 aa11.3□□□□□ -0.6
LINC00404-201ENST00000418660 C9orf85Q96MD7 179 aa11.3□□□□□ -0.6
LINC00404-201ENST00000418660 PKD1P98161 4303 aa11.29□□□□□ -0.6
LINC00404-201ENST00000418660 FABP5P3A8MUU1 101 aa11.29□□□□□ -0.6
LINC00404-201ENST00000418660 C9JCJ5 164 aa11.29□□□□□ -0.6
LINC00404-201ENST00000418660 PTH2Q96A98 100 aa11.29□□□□□ -0.6
LINC00404-201ENST00000418660 UMAD1C9J7I0 102 aa11.28□□□□□ -0.6
LINC00404-201ENST00000418660 CIDEAO60543 219 aa11.28□□□□□ -0.6
LINC00404-201ENST00000418660 FHITP49789 147 aa11.28□□□□□ -0.6
LINC00404-201ENST00000418660 Q86TA4 180 aa11.28□□□□□ -0.6
LINC00404-201ENST00000418660 TCEAL7Q9BRU2 100 aa11.28□□□□□ -0.6
LINC00404-201ENST00000418660 KANTRA0A1W2PQU2 76 aa11.27□□□□□ -0.61
LINC00404-201ENST00000418660 RS1O15537 224 aa11.27□□□□□ -0.61
LINC00404-201ENST00000418660 BCL2L11O43521 198 aa11.27□□□□□ -0.61
LINC00404-201ENST00000418660 MED14OSP0DP75 135 aa11.27□□□□□ -0.61
LINC00404-201ENST00000418660 RNASE3P12724 160 aaKnown RBP11.27□□□□□ -0.61
LINC00404-201ENST00000418660 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.61
LINC00404-201ENST00000418660 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
LINC00404-201ENST00000418660 TXNDC17Q9BRA2 123 aa11.27□□□□□ -0.61
LINC00404-201ENST00000418660 ZNF471Q9BX82 626 aaPredicted RBP11.27□□□□□ -0.61
LINC00404-201ENST00000418660 ZFP30Q9Y2G7 519 aa11.27□□□□□ -0.61
LINC00404-201ENST00000418660 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
LINC00404-201ENST00000418660 EIF5AP63241 154 aaKnown RBP11.26□□□□□ -0.61
LINC00404-201ENST00000418660 CFAP126Q5VTH2 177 aa11.26□□□□□ -0.61
LINC00404-201ENST00000418660 CST9LP1Q5W188 147 aa11.26□□□□□ -0.61
LINC00404-201ENST00000418660 DPPA3Q6W0C5 159 aa11.26□□□□□ -0.61
LINC00404-201ENST00000418660 COX8CQ7Z4L0 72 aa11.26□□□□□ -0.61
LINC00404-201ENST00000418660 FAM213BQ8TBF2 198 aa11.26□□□□□ -0.61
LINC00404-201ENST00000418660 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
LINC00404-201ENST00000418660 TRBV6-1A0A0K0K1D8 114 aa11.25□□□□□ -0.61
LINC00404-201ENST00000418660 PGPEP1LA6NFU8 196 aa11.25□□□□□ -0.61
LINC00404-201ENST00000418660 UBE2G1P62253 170 aa11.25□□□□□ -0.61
LINC00404-201ENST00000418660 ZNF506Q5JVG8 444 aa11.25□□□□□ -0.61
LINC00404-201ENST00000418660 SH2D6Q7Z4S9 175 aa11.25□□□□□ -0.61
LINC00404-201ENST00000418660 ZNF575Q86XF7 245 aa11.25□□□□□ -0.61
LINC00404-201ENST00000418660 SFT2D1Q8WV19 159 aa11.25□□□□□ -0.61
LINC00404-201ENST00000418660 DNAH11Q96DT5 4516 aa11.24□□□□□ -0.61
LINC00404-201ENST00000418660 LOC100131303A0A0U1RQF7 123 aa11.24□□□□□ -0.61
LINC00404-201ENST00000418660 PAGE4O60829 102 aa11.24□□□□□ -0.61
LINC00404-201ENST00000418660 S100A4P26447 101 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms