RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 OR11H1Q8NG94 326 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 OR1N2Q8NGR9 330 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 OR10J6PQ8NGY7 276 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 BORCS7Q96B45 105 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 FAM210BQ96KR6 192 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 IMMP2LQ96T52 175 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 RNASE7Q9H1E1 156 aaKnown RBP2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 RPP21Q9H633 154 aaKnown RBP2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 C16orf95Q9H693 158 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 NRN1Q9NPD7 142 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 IL36BQ9NZH7 164 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZNF492Q9P255 531 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 SMPXQ9UHP9 88 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZFP30Q9Y2G7 519 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 EPG5Q9HCE0 2579 aa2.82□□□□□ -1.96
HMGB3P20-201ENST00000417997 TRBV24-1A0A075B6N3 115 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 TRAV9-1A0A075B6T8 112 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 TMEM213A2RRL7 107 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 XKRY2A2RUG3 117 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 RBAKDNA6NC62 111 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 C2orf70A6NJV1 201 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 COLCA2A8K830 154 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 OVOL1O14753 267 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 IGLV2-8P01709 118 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 S100A6P06703 90 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 CXCL1P09341 107 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 PRB4P10163 310 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 CD28P10747 220 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 FOLR2P14207 255 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 AZU1P20160 251 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 TCL1AP56279 114 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 RAB4BP61018 213 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 SNRPD3P62318 126 aaKnown RBP2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 PAFAH1B2P68402 229 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 HIST1H1AQ02539 215 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 NSUN5P1Q3KNT7 163 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 SMUG1Q53HV7 270 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 TCTEX1D4Q5JR98 221 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 LCN12Q6JVE5 192 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 RBPMS2Q6ZRY4 209 aaKnown RBP2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 FAM231DQ6ZW35 169 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZFP82Q8N141 532 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 OR4B1Q8NGF8 309 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 OR2D3Q8NGH3 330 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 OR9G4Q8NGQ1 327 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 LINC01006Q8NI28 216 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 Q8TAT8 98 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 FRZBQ92765 325 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZC2HC1AQ96GY0 325 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 CITED2Q99967 270 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 KLF12Q9Y4X4 402 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 TSSC4Q9Y5U2 329 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 SELENOKQ9Y6D0 94 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 V9GYV3 84 aa2.81□□□□□ -1.96
HMGB3P20-201ENST00000417997 TRAV8-2A0A0B4J237 113 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 A0A1B0GUS0 222 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 IZUMO1RA6ND01 250 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZNF705FA8MVS1 300 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 A8MWL6 223 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 SNURFLB1AK76 121 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 CCL24O00175 119 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 SOCS3O14543 225 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 SPINK4O60575 86 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 SH2D1AO60880 128 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 CA1P00915 261 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 PFN1P07737 140 aaKnown RBP2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZNF688P0C7X2 276 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 CBLN1P23435 193 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 ZNF138P52744 262 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 ERCC8Q13216 396 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 KLF5Q13887 457 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 COX19Q49B96 90 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 PSMG4Q5JS54 123 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 FAM162BQ5T6X4 162 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 Q6AWC8 147 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 MRPL54Q6P161 138 aaKnown RBP2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 EBLN2Q6P2I7 272 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 TSKUQ8WUA8 353 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 SRD5A3Q9H8P0 318 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 NAT8BQ9UHF3 227 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 TRAPPC1Q9Y5R8 145 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 ABCA1O95477 2261 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 AGRNO00468 2067 aa2.8□□□□□ -1.96
HMGB3P20-201ENST00000417997 UTP20O75691 2785 aaKnown RBP2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 TENM4Q6N022 2769 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 FLNCQ14315 2725 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 MED13LQ71F56 2210 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 COL12A1Q99715 3063 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 TMSB15BA0A087X1C1 80 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 TRAV2A0A0B4J234 112 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 SMIM27A0A1W2PRY6 76 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 TMEM189A5PLL7 270 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 C19orf71A6NCJ1 209 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 OR4C46A6NHA9 309 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 FABP5P3A8MUU1 101 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 HIGD1CA8MV81 97 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 K7EQG2 157 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 SAP30O75446 220 aa2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 DUSP14O95147 198 aaKnown RBP2.79□□□□□ -1.96
HMGB3P20-201ENST00000417997 HLA-DQA1P01909 254 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms