RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 RAB5BP61020 215 aa12.55□□□□□ -0.4
CALD1-204ENST00000417172 LYZL1Q6UWQ5 148 aa12.55□□□□□ -0.4
CALD1-204ENST00000417172 TMEM136Q6ZRR5 245 aa12.55□□□□□ -0.4
CALD1-204ENST00000417172 A0A1B0GXF2 115 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 DUSP14O95147 198 aaKnown RBP12.54□□□□□ -0.4
CALD1-204ENST00000417172 FOXA3P55318 350 aaPredicted RBP12.54□□□□□ -0.4
CALD1-204ENST00000417172 GFI1BQ5VTD9 330 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 TRAV21A0A0B4J279 112 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 TRBV7-9A0A0J9YWB2 115 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 FAM231BA6NCW3 169 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST1H2BKO60814 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST1H2BJP06899 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST1H2BOP23527 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST1H2BBP33778 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST1H2BDP58876 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST1H2BCP62807 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST2H2BEQ16778 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.54□□□□□ -0.4
CALD1-204ENST00000417172 Q6AWC8 147 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST1H2BHQ93079 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST1H2BNQ99877 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 HIST1H2BMQ99879 126 aa12.54□□□□□ -0.4
CALD1-204ENST00000417172 SSBP4Q9BWG4 385 aaPredicted RBP12.54□□□□□ -0.4
CALD1-204ENST00000417172 ANXA2RQ3ZCQ2 193 aa12.53□□□□□ -0.4
CALD1-204ENST00000417172 ODF3Q96PU9 254 aa12.53□□□□□ -0.4
CALD1-204ENST00000417172 MRPL18Q9H0U6 180 aaKnown RBP12.53□□□□□ -0.4
CALD1-204ENST00000417172 XKRY2A2RUG3 117 aa12.52□□□□□ -0.4
CALD1-204ENST00000417172 OR11H12B2RN74 326 aa12.52□□□□□ -0.4
CALD1-204ENST00000417172 SPRY2O43597 315 aa12.52□□□□□ -0.4
CALD1-204ENST00000417172 IGLC6P0CF74 106 aa12.52□□□□□ -0.4
CALD1-204ENST00000417172 LEPP41159 167 aa12.52□□□□□ -0.4
CALD1-204ENST00000417172 CDKN1BP46527 198 aa12.52□□□□□ -0.4
CALD1-204ENST00000417172 FER1L6-AS1Q8NA97 138 aa12.52□□□□□ -0.4
CALD1-204ENST00000417172 C7orf71A4D174 169 aa12.52□□□□□ -0.41
CALD1-204ENST00000417172 KIAA1644Q3SXP7 199 aa12.52□□□□□ -0.41
CALD1-204ENST00000417172 GNB1LQ9BYB4 327 aa12.52□□□□□ -0.41
CALD1-204ENST00000417172 A0A1B0GUT8 65 aa12.51□□□□□ -0.41
CALD1-204ENST00000417172 A8MTW9 85 aa12.51□□□□□ -0.41
CALD1-204ENST00000417172 ZNF324O75467 553 aaPredicted RBP12.51□□□□□ -0.41
CALD1-204ENST00000417172 RBMY1A1P0DJD3 496 aaKnown RBP12.51□□□□□ -0.41
CALD1-204ENST00000417172 RBMY1CP0DJD4 496 aa12.51□□□□□ -0.41
CALD1-204ENST00000417172 RPS20P60866 119 aaKnown RBP12.51□□□□□ -0.41
CALD1-204ENST00000417172 HBBP68871 147 aa12.51□□□□□ -0.41
CALD1-204ENST00000417172 SLAQ13239 276 aa12.51□□□□□ -0.41
CALD1-204ENST00000417172 RBMY1FQ15415 496 aaKnown RBP12.51□□□□□ -0.41
CALD1-204ENST00000417172 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
CALD1-204ENST00000417172 COL6A5A8TX70 2615 aa12.51□□□□□ -0.41
CALD1-204ENST00000417172 GNRH2O43555 120 aa12.5□□□□□ -0.41
CALD1-204ENST00000417172 CTRLP40313 264 aa12.5□□□□□ -0.41
CALD1-204ENST00000417172 LBHQ53QV2 105 aaPredicted RBP12.5□□□□□ -0.41
CALD1-204ENST00000417172 ATP5L2Q7Z4Y8 100 aa12.5□□□□□ -0.41
CALD1-204ENST00000417172 OR2K2Q8NGT1 345 aa12.5□□□□□ -0.41
CALD1-204ENST00000417172 NIT2Q9NQR4 276 aa12.5□□□□□ -0.41
CALD1-204ENST00000417172 C19orf73Q9NVV2 129 aa12.5□□□□□ -0.41
CALD1-204ENST00000417172 CBY1Q9Y3M2 126 aa12.5□□□□□ -0.41
CALD1-204ENST00000417172 TIMM8BQ9Y5J9 83 aaPredicted RBP12.5□□□□□ -0.41
CALD1-204ENST00000417172 CRXO43186 299 aaPredicted RBP12.5□□□□□ -0.41
CALD1-204ENST00000417172 ZNF747Q9BV97 191 aa12.5□□□□□ -0.41
CALD1-204ENST00000417172 H3BVH4 76 aa12.49□□□□□ -0.41
CALD1-204ENST00000417172 WDR73Q6P4I2 378 aa12.49□□□□□ -0.41
CALD1-204ENST00000417172 C3orf56Q8N813 242 aa12.49□□□□□ -0.41
CALD1-204ENST00000417172 MSRB1Q9NZV6 116 aa12.49□□□□□ -0.41
CALD1-204ENST00000417172 TP53TG3Q9ULZ0 132 aa12.49□□□□□ -0.41
CALD1-204ENST00000417172 UBE2CO00762 179 aa12.49□□□□□ -0.41
CALD1-204ENST00000417172 TSPOP30536 169 aa12.49□□□□□ -0.41
CALD1-204ENST00000417172 MUC4Q99102 2169 aa12.48□□□□□ -0.41
CALD1-204ENST00000417172 IGLL1P15814 213 aa12.48□□□□□ -0.41
CALD1-204ENST00000417172 NDUFA6P56556 154 aa12.48□□□□□ -0.41
CALD1-204ENST00000417172 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
CALD1-204ENST00000417172 RASL11AQ6T310 242 aa12.48□□□□□ -0.41
CALD1-204ENST00000417172 STHQ8IWL8 128 aa12.48□□□□□ -0.41
CALD1-204ENST00000417172 OR10AG1Q8NH19 301 aa12.48□□□□□ -0.41
CALD1-204ENST00000417172 HLA-DQA1P01909 254 aa12.47□□□□□ -0.41
CALD1-204ENST00000417172 SNRPEP62304 92 aaKnown RBP12.47□□□□□ -0.41
CALD1-204ENST00000417172 CMYA5Q8N3K9 4069 aa12.47□□□□□ -0.41
CALD1-204ENST00000417172 APCSP02743 223 aa12.47□□□□□ -0.41
CALD1-204ENST00000417172 PRM2P04554 102 aa12.47□□□□□ -0.41
CALD1-204ENST00000417172 NTF3P20783 257 aa12.47□□□□□ -0.41
CALD1-204ENST00000417172 DEFA6Q01524 100 aa12.47□□□□□ -0.41
CALD1-204ENST00000417172 RIGQ13278 110 aa12.47□□□□□ -0.41
CALD1-204ENST00000417172 TRPT1Q86TN4 253 aaKnown RBP12.47□□□□□ -0.41
CALD1-204ENST00000417172 PKD1L1Q8TDX9 2849 aa12.46□□□□□ -0.41
CALD1-204ENST00000417172 MT-ND6P03923 174 aa12.46□□□□□ -0.42
CALD1-204ENST00000417172 TWIST1Q15672 202 aa12.46□□□□□ -0.42
CALD1-204ENST00000417172 FAM159AQ6UWV7 190 aa12.46□□□□□ -0.42
CALD1-204ENST00000417172 C12orf54Q6X4T0 127 aa12.46□□□□□ -0.42
CALD1-204ENST00000417172 BORCS7Q96B45 105 aa12.46□□□□□ -0.42
CALD1-204ENST00000417172 RNASE3P12724 160 aaKnown RBP12.45□□□□□ -0.42
CALD1-204ENST00000417172 ASIPP42127 132 aa12.45□□□□□ -0.42
CALD1-204ENST00000417172 INSL3P51460 131 aa12.45□□□□□ -0.42
CALD1-204ENST00000417172 COX19Q49B96 90 aa12.45□□□□□ -0.42
CALD1-204ENST00000417172 DEFB125Q8N687 156 aa12.45□□□□□ -0.42
CALD1-204ENST00000417172 XCL2Q9UBD3 114 aa12.45□□□□□ -0.42
CALD1-204ENST00000417172 HTN1P15515 57 aa12.44□□□□□ -0.42
CALD1-204ENST00000417172 RPL35AP18077 110 aaKnown RBP12.44□□□□□ -0.42
CALD1-204ENST00000417172 S100A4P26447 101 aaKnown RBP12.44□□□□□ -0.42
CALD1-204ENST00000417172 WFDC9Q8NEX5 89 aa12.44□□□□□ -0.42
CALD1-204ENST00000417172 CNFNQ9BYD5 112 aa12.44□□□□□ -0.42
CALD1-204ENST00000417172 C5orf52A6NGY3 159 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms