RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NDUFB4O95168 129 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 AZU1P20160 251 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 FUSP35637 526 aaKnown RBP eCLIP6.6□□□□□ -1.35
RFFL-203ENST00000413582 CST9LP1Q5W188 147 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 SLC7A5P1Q8MH63 180 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 C5orf17Q8NAS9 161 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 HIST1H2BAQ96A08 127 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 C11orf52Q96A22 123 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 AAMDCQ9H7C9 122 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 TREM1Q9NP99 234 aa6.6□□□□□ -1.35
RFFL-203ENST00000413582 ZNF331Q9NQX6 463 aaPredicted RBP6.6□□□□□ -1.35
RFFL-203ENST00000413582 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
RFFL-203ENST00000413582 TMEM218A2RU14 115 aa6.59□□□□□ -1.35
RFFL-203ENST00000413582 FBLL1A6NHQ2 334 aaKnown RBP6.59□□□□□ -1.35
RFFL-203ENST00000413582 KRBOX1C9JBD0 128 aa6.59□□□□□ -1.35
RFFL-203ENST00000413582 S100A9P06702 114 aaKnown RBP6.59□□□□□ -1.35
RFFL-203ENST00000413582 SRP19P09132 144 aaKnown RBP6.59□□□□□ -1.35
RFFL-203ENST00000413582 CNN1P51911 297 aaKnown RBP6.59□□□□□ -1.35
RFFL-203ENST00000413582 LINC00315P59091 139 aa6.59□□□□□ -1.35
RFFL-203ENST00000413582 UBE2G2P60604 165 aa6.59□□□□□ -1.35
RFFL-203ENST00000413582 RANP62826 216 aaKnown RBP6.59□□□□□ -1.35
RFFL-203ENST00000413582 FAM74A3Q4VXF1 159 aa6.59□□□□□ -1.35
RFFL-203ENST00000413582 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
RFFL-203ENST00000413582 BLNKQ8WV28 456 aa6.59□□□□□ -1.35
RFFL-203ENST00000413582 C16orf92Q96LL3 132 aa6.59□□□□□ -1.35
RFFL-203ENST00000413582 MRPS16Q9Y3D3 137 aaKnown RBP6.59□□□□□ -1.35
RFFL-203ENST00000413582 TRAV26-1A0A087WT03 109 aa6.58□□□□□ -1.36
RFFL-203ENST00000413582 TRAV8-2A0A0B4J237 113 aa6.58□□□□□ -1.36
RFFL-203ENST00000413582 GGTLC3B5MD39 225 aa6.58□□□□□ -1.36
RFFL-203ENST00000413582 CSN1S1P47710 185 aa6.58□□□□□ -1.36
RFFL-203ENST00000413582 SRSF3P84103 164 aaKnown RBP6.58□□□□□ -1.36
RFFL-203ENST00000413582 ESRGQ1W209 222 aa6.58□□□□□ -1.36
RFFL-203ENST00000413582 ANKRD39Q53RE8 183 aa6.58□□□□□ -1.36
RFFL-203ENST00000413582 CMTM2Q8TAZ6 248 aa6.58□□□□□ -1.36
RFFL-203ENST00000413582 SEC11CQ9BY50 192 aa6.58□□□□□ -1.36
RFFL-203ENST00000413582 EPDR1Q9UM22 224 aa6.58□□□□□ -1.36
RFFL-203ENST00000413582 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 TRBV6-1A0A0K0K1D8 114 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 PRSS47A8MTI9 375 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 K7EQM0 130 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 SLC17A3O00476 420 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 ATP6V1G1O75348 118 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 SLC25A5P05141 298 aaKnown RBP6.57□□□□□ -1.36
RFFL-203ENST00000413582 SNRPCP09234 159 aaKnown RBP6.57□□□□□ -1.36
RFFL-203ENST00000413582 TAS2R60P59551 318 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 KRTAP10-1P60331 282 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 PSG3Q16557 428 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 C10orf91Q5T1B1 145 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 IGFL4Q6B9Z1 124 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 RNF182Q8N6D2 247 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 RNASE8Q8TDE3 154 aaKnown RBP6.57□□□□□ -1.36
RFFL-203ENST00000413582 C16orf74Q96GX8 76 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 MDFICQ9P1T7 246 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 KLF12Q9Y4X4 402 aa6.57□□□□□ -1.36
RFFL-203ENST00000413582 TIMM8BQ9Y5J9 83 aaPredicted RBP6.57□□□□□ -1.36
RFFL-203ENST00000413582 A0A0J9YY99 117 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 RBAKDNA6NC62 111 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 DIRC3C9JPN6 131 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 C9JQL5 133 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 H3BTX0 84 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 PEX7O00628 323 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 DUSP14O95147 198 aaKnown RBP6.56□□□□□ -1.36
RFFL-203ENST00000413582 TCRAP04437 139 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 SFTA3P0C7M3 94 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 OR5I1Q13606 314 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 TMEM256Q8N2U0 113 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 EXOC3-AS1Q8N2X6 119 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 LINC00612Q8N6U2 182 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 CYB561D1Q8N8Q1 229 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 OR10J6PQ8NGY7 276 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 SMIM12Q96EX1 92 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 NOP10Q9NPE3 64 aaKnown RBP6.56□□□□□ -1.36
RFFL-203ENST00000413582 PPP1R14DQ9NXH3 145 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 LY96Q9Y6Y9 160 aa6.56□□□□□ -1.36
RFFL-203ENST00000413582 SCO2A0A1W2PP80 73 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 C9JCJ5 164 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 F8W036 122 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
RFFL-203ENST00000413582 HOXA5P20719 270 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 ERVFC1-1P60608 527 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 TMEM183BQ1AE95 376 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 TMEM75Q8N9X5 138 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 TMEM263Q8WUH6 116 aaKnown RBP6.55□□□□□ -1.36
RFFL-203ENST00000413582 FMC1Q96HJ9 113 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 LINC01587Q99440 93 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 PARLQ9H300 379 aa6.55□□□□□ -1.36
RFFL-203ENST00000413582 CARHSP1Q9Y2V2 147 aaKnown RBP6.55□□□□□ -1.36
RFFL-203ENST00000413582 ZNF727A8MUV8 499 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 H3BNG1 76 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 DNAH10OSP0CZ25 163 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 HTN1P15515 57 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 AKR1C3P42330 323 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 PNRC1Q12796 327 aaPredicted RBP6.54□□□□□ -1.36
RFFL-203ENST00000413582 ZNF493Q6ZR52 646 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 Q6ZSN1 163 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 LINC00477Q96M19 166 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 SMIM7Q9BQ49 75 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 ZFP30Q9Y2G7 519 aa6.54□□□□□ -1.36
RFFL-203ENST00000413582 LENEPQ9Y5L5 61 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms