RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 PARD6GQ9BYG4 376 aaPredicted RBP4.07□□□□□ -1.76
LINC00396-201ENST00000411690 NMES1Q9C002 83 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 SLC25A31Q9H0C2 315 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 HSPB7Q9UBY9 170 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 RNF24Q9Y225 148 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 STRAPQ9Y3F4 350 aaKnown RBP4.07□□□□□ -1.76
LINC00396-201ENST00000411690 KLF12Q9Y4X4 402 aa4.07□□□□□ -1.76
LINC00396-201ENST00000411690 IGKV1D-37A0A075B6S9 117 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 C9orf170A2RU37 121 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 TAAR5O14804 337 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 BCL2L11O43521 198 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 SCGB1D2O95969 90 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 HOXB5P09067 269 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 OR5G3P0C626 314 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 PET100P0DJ07 73 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 ORM2P19652 201 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 AARDQ4LEZ3 155 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 SMUG1Q53HV7 270 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 TMEM128Q5BJH2 165 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 OR10J3Q5JRS4 329 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 SPANXN5Q5MJ07 72 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 EIF5AL1Q6IS14 154 aaKnown RBP4.06□□□□□ -1.76
LINC00396-201ENST00000411690 INO80EQ8NBZ0 244 aaPredicted RBP4.06□□□□□ -1.76
LINC00396-201ENST00000411690 ATP6V0E2Q8NHE4 81 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 THAP6Q8TBB0 222 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 TMEM170AQ8WVE7 144 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 TRGV9Q99603 122 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 MRPL16Q9NX20 251 aaKnown RBP4.06□□□□□ -1.76
LINC00396-201ENST00000411690 COX11Q9Y6N1 276 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
LINC00396-201ENST00000411690 LPAP08519 4548 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 H3BP45 60 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 SYNGR2O43760 224 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 SFTA3P0C7M3 94 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 TPT1P13693 172 aaKnown RBP4.05□□□□□ -1.76
LINC00396-201ENST00000411690 RPL7P18124 248 aaKnown RBP4.05□□□□□ -1.76
LINC00396-201ENST00000411690 TCL1AP56279 114 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 TIRAPP58753 221 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 VAMP2P63027 116 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 ALKAL2Q6UX46 152 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 SH2D6Q7Z4S9 175 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 PPP1R1CQ8WVI7 109 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 SAT2Q96F10 170 aaPredicted RBP4.05□□□□□ -1.76
LINC00396-201ENST00000411690 SLC45A2Q9UMX9 530 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 HIGD1AQ9Y241 93 aa4.05□□□□□ -1.76
LINC00396-201ENST00000411690 SSSCA1O60232 199 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 HYPMO75409 117 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 SIX6O95475 246 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 SFT2D2O95562 160 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 SLC25A6P12236 298 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
LINC00396-201ENST00000411690 FLI1Q01543 452 aaPredicted RBP4.04□□□□□ -1.76
LINC00396-201ENST00000411690 PPP1R1AQ13522 171 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 ANXA2RQ3ZCQ2 193 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 C10orf91Q5T1B1 145 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 WDR73Q6P4I2 378 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 SVBPQ8N300 66 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 NHLRC2Q8NBF2 726 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 ZNF479Q96JC4 524 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 C2orf50Q96LR7 162 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 AQP10Q96PS8 301 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 PSENENQ9NZ42 101 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 GSKIPQ9P0R6 139 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 PRELID1Q9Y255 219 aa4.04□□□□□ -1.76
LINC00396-201ENST00000411690 CARHSP1Q9Y2V2 147 aaKnown RBP4.04□□□□□ -1.76
LINC00396-201ENST00000411690 TRAV8-1A0A0A6YYK1 113 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 LOC100131303A0A0U1RQF7 123 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 FAM25EA8MYX2 175 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 LINC00869P0C866 280 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 LEPP41159 167 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 SELENOTP62341 195 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 BLOC1S1P78537 153 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 IL15RAQ13261 267 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 RAB31Q13636 194 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 IBA57Q5T440 356 aaKnown RBP4.03□□□□□ -1.76
LINC00396-201ENST00000411690 CYP2G1PQ6ZSU1 146 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 CLRN3Q8NCR9 226 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 OR10P1Q8NGE3 313 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 RMI2Q96E14 147 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 ZNF471Q9BX82 626 aaPredicted RBP4.03□□□□□ -1.76
LINC00396-201ENST00000411690 MBD2Q9UBB5 411 aa4.03□□□□□ -1.76
LINC00396-201ENST00000411690 IGKV2D-24A0A075B6R9 120 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 TMEM218A2RU14 115 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 C5orf51A6NDU8 294 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 GGTLC3B5MD39 225 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 PANO1I0J062 215 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 COX7A2P2O60397 106 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 PITX3O75364 302 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 SNAPINO95295 136 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 SLC25A5P05141 298 aaKnown RBP4.02□□□□□ -1.77
LINC00396-201ENST00000411690 CT45A10P0DMU9 189 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 PVALBP20472 110 aaPredicted RBP4.02□□□□□ -1.77
LINC00396-201ENST00000411690 BTN1A1Q13410 526 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 C14orf177Q52M58 125 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 PXDC1Q5TGL8 231 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 REG3GQ6UW15 175 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 SMIM8Q96KF7 97 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 SEC11CQ9BY50 192 aa4.02□□□□□ -1.77
LINC00396-201ENST00000411690 NKX6-2Q9C056 277 aaPredicted RBP4.02□□□□□ -1.77
LINC00396-201ENST00000411690 IGKV1OR2-108A0A075B7D4 117 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 228.5 ms