RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 KRTAP4-5Q9BYR2 181 aa10.07□□□□□ -0.8
CBX3-203ENST00000409747 K7EQM0 130 aa10.06□□□□□ -0.8
CBX3-203ENST00000409747 CDC34P49427 236 aaPredicted RBP10.06□□□□□ -0.8
CBX3-203ENST00000409747 SH2D6Q7Z4S9 175 aa10.06□□□□□ -0.8
CBX3-203ENST00000409747 OR2G3Q8NGZ4 309 aa10.06□□□□□ -0.8
CBX3-203ENST00000409747 IGHV3-16A0A0C4DH30 117 aa10.05□□□□□ -0.8
CBX3-203ENST00000409747 F6UZH7 168 aa10.05□□□□□ -0.8
CBX3-203ENST00000409747 ARL14EPLP0DKL9 152 aa10.05□□□□□ -0.8
CBX3-203ENST00000409747 EVI2AP22794 236 aa10.05□□□□□ -0.8
CBX3-203ENST00000409747 Q8N1X5 172 aa10.05□□□□□ -0.8
CBX3-203ENST00000409747 PSMG3Q9BT73 122 aaPredicted RBP10.05□□□□□ -0.8
CBX3-203ENST00000409747 PGPEP1Q9NXJ5 209 aa10.05□□□□□ -0.8
CBX3-203ENST00000409747 TRAV8-1A0A0A6YYK1 113 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 HMGB3O15347 200 aaKnown RBP10.04□□□□□ -0.8
CBX3-203ENST00000409747 MBP02144 154 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 TYMSP04818 313 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 CDPF1Q6NVV7 123 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 C5orf17Q8NAS9 161 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 ASB13Q8WXK3 278 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 ALG5Q9Y673 324 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 GNRH2O43555 120 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 STAG3L2P0CL84 134 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 STAG3L3P0CL85 134 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 GNG5P63218 68 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 HSD17B11Q8NBQ5 300 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 TVP23CQ96ET8 276 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
CBX3-203ENST00000409747 DNAH10OSP0CZ25 163 aa10.03□□□□□ -0.8
CBX3-203ENST00000409747 SERF2P84101 59 aa10.03□□□□□ -0.8
CBX3-203ENST00000409747 ZFP69Q49AA0 526 aa10.03□□□□□ -0.8
CBX3-203ENST00000409747 WFDC10BQ8IUB3 73 aa10.03□□□□□ -0.8
CBX3-203ENST00000409747 C10orf126Q8N4M7 172 aa10.03□□□□□ -0.8
CBX3-203ENST00000409747 AQP10Q96PS8 301 aa10.03□□□□□ -0.8
CBX3-203ENST00000409747 MSRB1Q9NZV6 116 aa10.03□□□□□ -0.8
CBX3-203ENST00000409747 CIDEAO60543 219 aa10.02□□□□□ -0.8
CBX3-203ENST00000409747 PTTG1O95997 202 aa10.02□□□□□ -0.8
CBX3-203ENST00000409747 TCRAP04437 139 aa10.02□□□□□ -0.8
CBX3-203ENST00000409747 TMEM167BQ9NRX6 74 aa10.02□□□□□ -0.8
CBX3-203ENST00000409747 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.8
CBX3-203ENST00000409747 FBLL1A6NHQ2 334 aaKnown RBP10.02□□□□□ -0.81
CBX3-203ENST00000409747 TAAR5O14804 337 aa10.02□□□□□ -0.81
CBX3-203ENST00000409747 GCHFRP30047 84 aa10.02□□□□□ -0.81
CBX3-203ENST00000409747 TIRAPP58753 221 aa10.02□□□□□ -0.81
CBX3-203ENST00000409747 NHLRC2Q8NBF2 726 aa10.02□□□□□ -0.81
CBX3-203ENST00000409747 SUN5Q8TC36 379 aa10.02□□□□□ -0.81
CBX3-203ENST00000409747 RAB24Q969Q5 203 aa10.02□□□□□ -0.81
CBX3-203ENST00000409747 MED28Q9H204 178 aa10.02□□□□□ -0.81
CBX3-203ENST00000409747 SCRT2Q9NQ03 307 aa10.02□□□□□ -0.81
CBX3-203ENST00000409747 CXorf1O96002 111 aa10.01□□□□□ -0.81
CBX3-203ENST00000409747 GATA1P15976 413 aaPredicted RBP10.01□□□□□ -0.81
CBX3-203ENST00000409747 ATP6V0CP27449 155 aa10.01□□□□□ -0.81
CBX3-203ENST00000409747 PPT1P50897 306 aa10.01□□□□□ -0.81
CBX3-203ENST00000409747 CRYGDP07320 174 aa10□□□□□ -0.81
CBX3-203ENST00000409747 PFN1P07737 140 aaKnown RBP10□□□□□ -0.81
CBX3-203ENST00000409747 ZNF876PQ49A33 203 aa10□□□□□ -0.81
CBX3-203ENST00000409747 CYB561D1Q8N8Q1 229 aa10□□□□□ -0.81
CBX3-203ENST00000409747 SGK494Q96LW2 274 aa10□□□□□ -0.81
CBX3-203ENST00000409747 ACTR3CQ9C0K3 210 aaPredicted RBP10□□□□□ -0.81
CBX3-203ENST00000409747 TNFSF18Q9UNG2 199 aa10□□□□□ -0.81
CBX3-203ENST00000409747 PSG8Q9UQ74 426 aa10□□□□□ -0.81
CBX3-203ENST00000409747 TNFRSF18Q9Y5U5 241 aa10□□□□□ -0.81
CBX3-203ENST00000409747 A0A087WTM6 91 aa9.99□□□□□ -0.81
CBX3-203ENST00000409747 GCGP01275 180 aa9.99□□□□□ -0.81
CBX3-203ENST00000409747 FLI1Q01543 452 aaPredicted RBP9.99□□□□□ -0.81
CBX3-203ENST00000409747 SMUG1Q53HV7 270 aa9.99□□□□□ -0.81
CBX3-203ENST00000409747 TMEM75Q8N9X5 138 aa9.99□□□□□ -0.81
CBX3-203ENST00000409747 INO80EQ8NBZ0 244 aaPredicted RBP9.99□□□□□ -0.81
CBX3-203ENST00000409747 PRADC1Q9BSG0 188 aa9.99□□□□□ -0.81
CBX3-203ENST00000409747 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
CBX3-203ENST00000409747 RHOHQ15669 191 aa9.99□□□□□ -0.81
CBX3-203ENST00000409747 SAPCD1Q5SSQ6 148 aa9.99□□□□□ -0.81
CBX3-203ENST00000409747 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
CBX3-203ENST00000409747 IGHV3-38A0A0C4DH36 116 aa9.98□□□□□ -0.81
CBX3-203ENST00000409747 TRBV6-4A0A1B0GX49 114 aa9.98□□□□□ -0.81
CBX3-203ENST00000409747 GGTLC3B5MD39 225 aa9.98□□□□□ -0.81
CBX3-203ENST00000409747 GIPP09681 153 aaPredicted RBP9.98□□□□□ -0.81
CBX3-203ENST00000409747 SUMO1P63165 101 aaKnown RBP9.98□□□□□ -0.81
CBX3-203ENST00000409747 PRNTQ86SH4 94 aa9.98□□□□□ -0.81
CBX3-203ENST00000409747 PTH2Q96A98 100 aa9.98□□□□□ -0.81
CBX3-203ENST00000409747 SH3BGRL3Q9H299 93 aa9.98□□□□□ -0.81
CBX3-203ENST00000409747 BORCS7-ASMTA0A0B4J1R7 106 aa9.97□□□□□ -0.81
CBX3-203ENST00000409747 TRAV8-6A0A0B4J262 113 aa9.97□□□□□ -0.81
CBX3-203ENST00000409747 RS1O15537 224 aa9.97□□□□□ -0.81
CBX3-203ENST00000409747 ZNF80P51504 273 aaPredicted RBP9.97□□□□□ -0.81
CBX3-203ENST00000409747 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
CBX3-203ENST00000409747 SLC25A29Q8N8R3 303 aa9.97□□□□□ -0.81
CBX3-203ENST00000409747 C9orf85Q96MD7 179 aa9.97□□□□□ -0.81
CBX3-203ENST00000409747 A0A1W2PRE2 83 aa9.96□□□□□ -0.81
CBX3-203ENST00000409747 IGLV2-11P01706 119 aa9.96□□□□□ -0.81
CBX3-203ENST00000409747 MGST1P10620 155 aaKnown RBP9.96□□□□□ -0.81
CBX3-203ENST00000409747 LINC01556Q5JQF7 62 aa9.96□□□□□ -0.81
CBX3-203ENST00000409747 C11orf21Q9P2W6 132 aa9.96□□□□□ -0.81
CBX3-203ENST00000409747 PSCAO43653 123 aa9.95□□□□□ -0.82
CBX3-203ENST00000409747 OR10J3Q5JRS4 329 aa9.95□□□□□ -0.82
CBX3-203ENST00000409747 ZNF506Q5JVG8 444 aa9.95□□□□□ -0.82
CBX3-203ENST00000409747 NKX6-2Q9C056 277 aaPredicted RBP9.94□□□□□ -0.82
CBX3-203ENST00000409747 FXYD6-FXYD2A0A087WZ82 144 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 IGHV3-73A0A0B4J1V6 119 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 CTXND1A0A1B0GTU2 59 aa9.93□□□□□ -0.82
CBX3-203ENST00000409747 EPM2AB3EWF7 344 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms