RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CTSGP08311 255 aa10.39□□□□□ -0.75
COL6A2-204ENST00000409416 ZNF688P0C7X2 276 aa10.39□□□□□ -0.75
COL6A2-204ENST00000409416 MRPL51Q4U2R6 128 aaKnown RBP10.39□□□□□ -0.75
COL6A2-204ENST00000409416 SCRT2Q9NQ03 307 aa10.39□□□□□ -0.75
COL6A2-204ENST00000409416 IGHV3-73A0A0B4J1V6 119 aa10.38□□□□□ -0.75
COL6A2-204ENST00000409416 SRSF8Q9BRL6 282 aaKnown RBP10.38□□□□□ -0.75
COL6A2-204ENST00000409416 BEX4Q9NWD9 120 aaPredicted RBP10.38□□□□□ -0.75
COL6A2-204ENST00000409416 TMEM160Q9NX00 188 aa10.38□□□□□ -0.75
COL6A2-204ENST00000409416 TRAV12-2A0A075B6T6 113 aa10.37□□□□□ -0.75
COL6A2-204ENST00000409416 DEFB136Q30KP8 78 aa10.37□□□□□ -0.75
COL6A2-204ENST00000409416 ZFHX3Q15911 3703 aa10.37□□□□□ -0.75
COL6A2-204ENST00000409416 FAM104BQ5XKR9 115 aa10.37□□□□□ -0.75
COL6A2-204ENST00000409416 UNQ9165/PRO28630Q6UXU0 137 aa10.37□□□□□ -0.75
COL6A2-204ENST00000409416 Q8N9W7 124 aa10.37□□□□□ -0.75
COL6A2-204ENST00000409416 PRR25Q96S07 402 aa10.37□□□□□ -0.75
COL6A2-204ENST00000409416 ITPR2Q14571 2701 aa10.37□□□□□ -0.75
COL6A2-204ENST00000409416 TRAV41A0A0B4J266 112 aa10.36□□□□□ -0.75
COL6A2-204ENST00000409416 RNF223E7ERA6 249 aa10.36□□□□□ -0.75
COL6A2-204ENST00000409416 ATP6V0BQ99437 205 aa10.36□□□□□ -0.75
COL6A2-204ENST00000409416 GCN1Q92616 2671 aaKnown RBP10.36□□□□□ -0.75
COL6A2-204ENST00000409416 LY6LH3BQJ8 138 aa10.36□□□□□ -0.75
COL6A2-204ENST00000409416 IFI27L1Q96BM0 104 aa10.36□□□□□ -0.75
COL6A2-204ENST00000409416 CENPVL3A0A0U1RRI6 287 aa10.36□□□□□ -0.75
COL6A2-204ENST00000409416 CRXO43186 299 aaPredicted RBP10.36□□□□□ -0.75
COL6A2-204ENST00000409416 LINC01545Q5VT33 79 aa10.36□□□□□ -0.75
COL6A2-204ENST00000409416 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
COL6A2-204ENST00000409416 HBDP02042 147 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 Q6AWC8 147 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 LYPD1Q8N2G4 141 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 ITLN2Q8WWU7 325 aaPredicted RBP10.35□□□□□ -0.75
COL6A2-204ENST00000409416 CFHR4Q92496 578 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 IGLV11-55A0A075B6I3 123 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 C14orf178Q8N769 122 aaPredicted RBP10.35□□□□□ -0.75
COL6A2-204ENST00000409416 EEF1AKMT3Q96AZ1 226 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 RNF5Q99942 180 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 LEPP41159 167 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 SS18L2Q9UHA2 77 aa10.35□□□□□ -0.75
COL6A2-204ENST00000409416 A0A087WWL8 130 aa10.34□□□□□ -0.75
COL6A2-204ENST00000409416 COX8AP10176 69 aa10.34□□□□□ -0.75
COL6A2-204ENST00000409416 PAX8Q06710 450 aa10.34□□□□□ -0.75
COL6A2-204ENST00000409416 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
COL6A2-204ENST00000409416 FOXC2Q99958 501 aa10.34□□□□□ -0.75
COL6A2-204ENST00000409416 MS4A6AQ9H2W1 248 aa10.34□□□□□ -0.75
COL6A2-204ENST00000409416 TSSC4Q9Y5U2 329 aaPredicted RBP10.34□□□□□ -0.75
COL6A2-204ENST00000409416 NDUFA3O95167 84 aa10.34□□□□□ -0.75
COL6A2-204ENST00000409416 MTURNQ8N3F0 131 aa10.34□□□□□ -0.75
COL6A2-204ENST00000409416 ZNF48Q96MX3 618 aaPredicted RBP10.34□□□□□ -0.75
COL6A2-204ENST00000409416 SPCS1Q9Y6A9 102 aa10.34□□□□□ -0.75
COL6A2-204ENST00000409416 PRM2P04554 102 aa10.33□□□□□ -0.76
COL6A2-204ENST00000409416 GCSHP23434 173 aa10.33□□□□□ -0.76
COL6A2-204ENST00000409416 OR2K2Q8NGT1 345 aa10.33□□□□□ -0.76
COL6A2-204ENST00000409416 MAP1LC3AQ9H492 121 aa10.33□□□□□ -0.76
COL6A2-204ENST00000409416 IGHV4-59P01825 116 aa10.33□□□□□ -0.76
COL6A2-204ENST00000409416 DEFB125Q8N687 156 aa10.33□□□□□ -0.76
COL6A2-204ENST00000409416 PHLDA3Q9Y5J5 127 aa10.33□□□□□ -0.76
COL6A2-204ENST00000409416 A0A1B0GW15 77 aa10.33□□□□□ -0.76
COL6A2-204ENST00000409416 NIPBLQ6KC79 2804 aaeCLIP10.32□□□□□ -0.76
COL6A2-204ENST00000409416 IGHV3-64A0A075B6Q5 118 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 TRAV12-3A0A0B4J271 114 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 MRPS12O15235 138 aaKnown RBP10.32□□□□□ -0.76
COL6A2-204ENST00000409416 GTSCR1Q86UQ5 136 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 OR11H6Q8NGC7 330 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 OR4X2Q8NGF9 303 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 MXRA5Q9NR99 2828 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 FABP5P3A8MUU1 101 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 G3V4G9 280 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 AGPAT4-IT1Q9H0P7 198 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 ZNF256Q9Y2P7 627 aaPredicted RBP10.32□□□□□ -0.76
COL6A2-204ENST00000409416 F8W735 103 aaPredicted RBP10.32□□□□□ -0.76
COL6A2-204ENST00000409416 PDE6HQ13956 83 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 ZNF502Q8TBZ5 544 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
COL6A2-204ENST00000409416 SMAD5-AS1Q9Y6J3 95 aa10.32□□□□□ -0.76
COL6A2-204ENST00000409416 ATRQ13535 2644 aa10.31□□□□□ -0.76
COL6A2-204ENST00000409416 A0A096LNJ9 63 aa10.31□□□□□ -0.76
COL6A2-204ENST00000409416 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
COL6A2-204ENST00000409416 GNRH2O43555 120 aa10.31□□□□□ -0.76
COL6A2-204ENST00000409416 PSMG4Q5JS54 123 aa10.31□□□□□ -0.76
COL6A2-204ENST00000409416 C8orf86Q6ZUL3 223 aa10.31□□□□□ -0.76
COL6A2-204ENST00000409416 M0R1W7 72 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 LMO4P61968 165 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 C2orf91Q6ZV80 131 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 NPBQ8NG41 125 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 KLK9Q9UKQ9 250 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 TEX48A0A1B0GUV7 120 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 J3QR89 54 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 CD5LO43866 347 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 SYNJ2BPP57105 145 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 OR10J6PQ8NGY7 276 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 UBE2E1P51965 193 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 JPT2Q9H910 190 aa10.3□□□□□ -0.76
COL6A2-204ENST00000409416 A6NDN8 102 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 HSD52Q0P140 79 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 LY6G5BQ8NDX9 201 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 JMJD8Q96S16 334 aa10.29□□□□□ -0.76
COL6A2-204ENST00000409416 UBR5O95071 2799 aaPredicted RBP10.29□□□□□ -0.76
COL6A2-204ENST00000409416 TNFRSF6BO95407 300 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms