RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 LINC01559Q495D7 138 aa12.9□□□□□ -0.34
SYNC-202ENST00000409190 Q8N6K4 173 aa12.9□□□□□ -0.34
SYNC-202ENST00000409190 Q8N8P6 123 aa12.9□□□□□ -0.34
SYNC-202ENST00000409190 DPF1Q92782 380 aa12.9□□□□□ -0.34
SYNC-202ENST00000409190 BPESC1Q9GZL8 116 aa12.9□□□□□ -0.34
SYNC-202ENST00000409190 NPFFR1Q9GZQ6 430 aa12.9□□□□□ -0.34
SYNC-202ENST00000409190 RAXQ9Y2V3 346 aa12.9□□□□□ -0.34
SYNC-202ENST00000409190 SCGB2A2Q13296 93 aa12.89□□□□□ -0.35
SYNC-202ENST00000409190 H3BMG7 143 aa12.89□□□□□ -0.35
SYNC-202ENST00000409190 CYSLTR1Q9Y271 337 aa12.89□□□□□ -0.35
SYNC-202ENST00000409190 UNQ9165/PRO28630Q6UXU0 137 aa12.88□□□□□ -0.35
SYNC-202ENST00000409190 FAM110DQ8TAY7 271 aaPredicted RBP12.88□□□□□ -0.35
SYNC-202ENST00000409190 CRYBG3Q68DQ2 2970 aa12.88□□□□□ -0.35
SYNC-202ENST00000409190 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
SYNC-202ENST00000409190 SH2D6Q7Z4S9 175 aa12.88□□□□□ -0.35
SYNC-202ENST00000409190 C20orf173Q96LM9 149 aa12.88□□□□□ -0.35
SYNC-202ENST00000409190 ZNF48Q96MX3 618 aaPredicted RBP12.87□□□□□ -0.35
SYNC-202ENST00000409190 CACNA1AO00555 2505 aa12.87□□□□□ -0.35
SYNC-202ENST00000409190 RNASE4P34096 147 aaKnown RBP12.87□□□□□ -0.35
SYNC-202ENST00000409190 WFDC2Q14508 124 aa12.87□□□□□ -0.35
SYNC-202ENST00000409190 EEF1AKMT3Q96AZ1 226 aa12.87□□□□□ -0.35
SYNC-202ENST00000409190 GTSF1LQ9H1H1 148 aa12.87□□□□□ -0.35
SYNC-202ENST00000409190 SCGB3A1Q96QR1 104 aa12.87□□□□□ -0.35
SYNC-202ENST00000409190 SIVA1O15304 175 aa12.86□□□□□ -0.35
SYNC-202ENST00000409190 NRACQ8N912 160 aa12.86□□□□□ -0.35
SYNC-202ENST00000409190 SLC50A1Q9BRV3 221 aa12.86□□□□□ -0.35
SYNC-202ENST00000409190 G3V4G9 280 aa12.86□□□□□ -0.35
SYNC-202ENST00000409190 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.86□□□□□ -0.35
SYNC-202ENST00000409190 GNRH2O43555 120 aa12.86□□□□□ -0.35
SYNC-202ENST00000409190 ATP5G2Q06055 141 aa12.86□□□□□ -0.35
SYNC-202ENST00000409190 CEND1Q8N111 149 aa12.86□□□□□ -0.35
SYNC-202ENST00000409190 PHLDA3Q9Y5J5 127 aa12.86□□□□□ -0.35
SYNC-202ENST00000409190 ATP5LO75964 103 aa12.85□□□□□ -0.35
SYNC-202ENST00000409190 ARL3P36405 182 aa12.85□□□□□ -0.35
SYNC-202ENST00000409190 CLEC2AQ6UVW9 174 aa12.85□□□□□ -0.35
SYNC-202ENST00000409190 ZNF479Q96JC4 524 aa12.85□□□□□ -0.35
SYNC-202ENST00000409190 SIRPDQ9H106 197 aa12.85□□□□□ -0.35
SYNC-202ENST00000409190 IGLV2-18A0A075B6J9 118 aa12.85□□□□□ -0.35
SYNC-202ENST00000409190 IGKV3-20P01619 116 aa12.85□□□□□ -0.35
SYNC-202ENST00000409190 ETDBQ3ZM63 59 aa12.85□□□□□ -0.35
SYNC-202ENST00000409190 CELSR2Q9HCU4 2923 aa12.85□□□□□ -0.35
SYNC-202ENST00000409190 MINOS1Q5TGZ0 78 aa12.84□□□□□ -0.35
SYNC-202ENST00000409190 CNFNQ9BYD5 112 aa12.84□□□□□ -0.35
SYNC-202ENST00000409190 MINOS1-NBL1R4GNA1 71 aa12.84□□□□□ -0.35
SYNC-202ENST00000409190 TGFAP01135 160 aa12.84□□□□□ -0.35
SYNC-202ENST00000409190 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.35
SYNC-202ENST00000409190 COX8CQ7Z4L0 72 aa12.84□□□□□ -0.35
SYNC-202ENST00000409190 C11orf71Q6IPW1 123 aa12.84□□□□□ -0.35
SYNC-202ENST00000409190 SMAGPQ0VAQ4 97 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 OR5A1Q8NGJ0 315 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 LY6DQ14210 128 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 JPT2Q9H910 190 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 ANXA2RQ3ZCQ2 193 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 CD300EQ496F6 205 aaPredicted RBP12.83□□□□□ -0.36
SYNC-202ENST00000409190 SCGB1D4Q6XE38 83 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 OR11H1Q8NG94 326 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 OR11H2Q8NH07 326 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 FAM208BQ5VWN6 2430 aa12.83□□□□□ -0.36
SYNC-202ENST00000409190 CENPVL3A0A0U1RRI6 287 aa12.82□□□□□ -0.36
SYNC-202ENST00000409190 KLHL30-AS1Q8NEE0 82 aa12.82□□□□□ -0.36
SYNC-202ENST00000409190 ZMAT4Q9H898 229 aa12.82□□□□□ -0.36
SYNC-202ENST00000409190 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
SYNC-202ENST00000409190 A0A087WX48 190 aa12.82□□□□□ -0.36
SYNC-202ENST00000409190 EDN2P20800 178 aa12.82□□□□□ -0.36
SYNC-202ENST00000409190 SMIM2Q9BVW6 85 aa12.82□□□□□ -0.36
SYNC-202ENST00000409190 USP9XQ93008 2570 aaPredicted RBP12.82□□□□□ -0.36
SYNC-202ENST00000409190 TMEM238C9JI98 176 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 F5H697 171 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 PF4V1P10720 104 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 EBI3Q14213 229 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 C12orf74Q32Q52 190 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 TLN2Q9Y4G6 2542 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 SETD2Q9BYW2 2564 aaPredicted RBP12.81□□□□□ -0.36
SYNC-202ENST00000409190 C2CD3Q4AC94 2353 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 TRAV41A0A0B4J266 112 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 IGLL5B9A064 214 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 UBE2E1P51965 193 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 NPFFO15130 113 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 ACACBO00763 2458 aa12.81□□□□□ -0.36
SYNC-202ENST00000409190 MYO9AB2RTY4 2548 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 A0A087WWL8 130 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 RAB9AP51151 201 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 SUMO2P61956 95 aaKnown RBP12.8□□□□□ -0.36
SYNC-202ENST00000409190 FAM74A4Q5TZK3 123 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 OR10J6PQ8NGY7 276 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 PSMG3-AS1Q96PY0 264 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 CSMD2Q7Z408 3487 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 NBL1P41271 181 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 AJUBAQ96IF1 538 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 ABCA2Q9BZC7 2435 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 RASL10AQ92737 203 aa12.8□□□□□ -0.36
SYNC-202ENST00000409190 TSSC4Q9Y5U2 329 aaPredicted RBP12.8□□□□□ -0.36
SYNC-202ENST00000409190 MYO18BQ8IUG5 2567 aa12.79□□□□□ -0.36
SYNC-202ENST00000409190 APOMO95445 188 aa12.79□□□□□ -0.36
SYNC-202ENST00000409190 C2orf66Q6UXQ4 117 aa12.79□□□□□ -0.36
SYNC-202ENST00000409190 LOC107984156A0A0G2JMH3 177 aa12.79□□□□□ -0.36
SYNC-202ENST00000409190 INSL3P51460 131 aa12.79□□□□□ -0.36
SYNC-202ENST00000409190 SRSF9Q13242 221 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYNC-202ENST00000409190 ARL17AQ8IVW1 177 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms