RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 GYPAP02724 150 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 CD7P09564 240 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 COX6A1P12074 109 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 FAUP35544 74 aaKnown RBP2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 CA7P43166 264 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 LSM3P62310 102 aaKnown RBP2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 UBE2BP63146 152 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 INSL4Q14641 139 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 KRTAP25-1Q3LHN0 102 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 NMSQ5H8A3 153 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 C7orf65Q6ZTY9 151 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 SPATA12Q7Z6I5 190 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 SBSPONQ8IVN8 264 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 Q8NAQ8 132 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 C18orf32Q8TCD1 76 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 PPDPFLQ8WWR9 84 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 RAB37Q96AX2 223 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 UPK3BQ9BT76 320 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 MYH8P13535 1937 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 PPLO60437 1756 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 WIZO95785 1651 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 RALGAPA2Q2PPJ7 1873 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 MYO18AQ92614 2054 aaKnown RBP2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 ZNF638Q14966 1978 aaKnown RBP2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 LYRM1O43325 122 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 SLC25A20O43772 301 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 IGHV3-30-3P0DP02 117 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 COL8A2P25067 703 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 KISS1Q15726 138 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 OR8B3Q8NGG8 313 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 FGF13Q92913 245 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 MS4A6EQ96DS6 147 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 LRRC9Q6ZRR7 1453 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 RALGAPBQ86X10 1494 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 MROH2AA6NES4 1674 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 ABCC1P33527 1531 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 DLC1Q96QB1 1528 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 ITSN1Q15811 1721 aa2.62□□□□□ -1.99
HMGB1P13-201ENST00000406019 VWDEQ8N2E2 1590 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 CFAP74Q9C0B2 1584 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 FANCMQ8IYD8 2048 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 MYO3AQ8NEV4 1616 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 CRB1P82279 1406 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 C10orf71Q711Q0 1435 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 ZNF142P52746 1687 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 NAP1L6A6NFF2 107 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 FAM24AA6NFZ4 105 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 A6NN06 94 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 IGKCP01834 107 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 SRP19P09132 144 aaKnown RBP2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 HRES1P13985 223 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 SSR2P43308 183 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 CSN1S1P47710 185 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 MRPL51Q4U2R6 128 aaKnown RBP2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 SCXQ7RTU7 201 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 LYPD6Q86Y78 171 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 DIRC1Q969H9 104 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 COL5A3P25940 1745 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 COL18A1P39060 1754 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 KDM3BQ7LBC6 1761 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 IQGAP2Q13576 1575 aa2.61□□□□□ -1.99
HMGB1P13-201ENST00000406019 PXDNQ92626 1479 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 XRN1Q8IZH2 1706 aaKnown RBP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 CCDC88CQ9P219 2028 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 UMAD1C9J7I0 102 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 C9JCJ5 164 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 SDCBPO00560 298 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 TIMM17BO60830 172 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 CPSF4O95639 269 aaKnown RBP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 MPV17LQ2QL34 196 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 TMEM155Q4W5P6 130 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 LINC01545Q5VT33 79 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 SOSTDC1Q6X4U4 206 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 Q8N8P6 123 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 TSKUQ8WUA8 353 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 ODF3Q96PU9 254 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 OR8B2Q96RD0 313 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 IL36BQ9NZH7 164 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 LINC00474Q9P2X8 69 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 ATG2BQ96BY7 2078 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 PLXNA4Q9HCM2 1894 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 KIAA0556O60303 1618 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 HELZP42694 1942 aaKnown RBP2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 TCHHQ07283 1943 aa2.6□□□□□ -1.99
HMGB1P13-201ENST00000406019 IFT172Q9UG01 1749 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 SCN11AQ9UI33 1791 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 DOCK2Q92608 1830 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 ARHGEF12Q9NZN5 1544 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 IGLV3-9A0A075B6K5 115 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 MDFIC2A0A1B0GVS7 189 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 CCL20P78556 96 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 CDK5R1Q15078 307 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 PATE2Q6UY27 113 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 DAND5Q8N907 189 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 C15orf53Q8NAA6 179 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 MUC7Q8TAX7 377 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 CMTM2Q8TAZ6 248 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 MYOZ3Q8TDC0 251 aa2.59□□□□□ -1.99
HMGB1P13-201ENST00000406019 MCEEQ96PE7 176 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms