RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
RTN4-207ENST00000402434 TMEM183AQ8IXX5 376 aa13.49□□□□□ -0.25
RTN4-207ENST00000402434 TRGV1A0A0A0MS02 117 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 PFN1P07737 140 aaKnown RBP13.48□□□□□ -0.25
RTN4-207ENST00000402434 KCNS1Q96KK3 526 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 NAGKQ9UJ70 344 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 MUC4Q99102 2169 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 GNRH2O43555 120 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 COX8CQ7Z4L0 72 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 Q86TA4 180 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 C15orf53Q8NAA6 179 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 FMC1Q96HJ9 113 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 C11orf21Q9P2W6 132 aa13.48□□□□□ -0.25
RTN4-207ENST00000402434 TRGV2A0A075B6R0 118 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 IGHV3-16A0A0C4DH30 117 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 TRBV6-1A0A0K0K1D8 114 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 P0DMU3 169 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 FAM231AP0DMU4 169 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 FAM231CP0DMU5 169 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 CCL20P78556 96 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 SPXQ9BT56 116 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 SDF2L1Q9HCN8 221 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 ZFP30Q9Y2G7 519 aa13.47□□□□□ -0.25
RTN4-207ENST00000402434 HOXA5P20719 270 aa13.46□□□□□ -0.25
RTN4-207ENST00000402434 RASL10AQ92737 203 aa13.46□□□□□ -0.25
RTN4-207ENST00000402434 MRPL16Q9NX20 251 aaKnown RBP13.46□□□□□ -0.25
RTN4-207ENST00000402434 KMT2AQ03164 3969 aa13.46□□□□□ -0.26
RTN4-207ENST00000402434 TYMSP04818 313 aa13.45□□□□□ -0.26
RTN4-207ENST00000402434 TEX46H3BTG2 121 aa13.44□□□□□ -0.26
RTN4-207ENST00000402434 LTAP01374 205 aa13.44□□□□□ -0.26
RTN4-207ENST00000402434 UBE2G1P62253 170 aa13.44□□□□□ -0.26
RTN4-207ENST00000402434 OR5I1Q13606 314 aa13.44□□□□□ -0.26
RTN4-207ENST00000402434 POM121L12Q8N7R1 296 aa13.44□□□□□ -0.26
RTN4-207ENST00000402434 MANBALQ9NQG1 85 aa13.44□□□□□ -0.26
RTN4-207ENST00000402434 FABP5P3A8MUU1 101 aa13.43□□□□□ -0.26
RTN4-207ENST00000402434 S100A9P06702 114 aaKnown RBP13.43□□□□□ -0.26
RTN4-207ENST00000402434 GNG13Q9P2W3 67 aa13.43□□□□□ -0.26
RTN4-207ENST00000402434 TRAV26-1A0A087WT03 109 aa13.42□□□□□ -0.26
RTN4-207ENST00000402434 H3BNG1 76 aa13.42□□□□□ -0.26
RTN4-207ENST00000402434 AKR1C3P42330 323 aa13.42□□□□□ -0.26
RTN4-207ENST00000402434 ZC2HC1AQ96GY0 325 aa13.42□□□□□ -0.26
RTN4-207ENST00000402434 SCO2A0A1W2PP80 73 aa13.42□□□□□ -0.26
RTN4-207ENST00000402434 CRIP1P50238 77 aa13.42□□□□□ -0.26
RTN4-207ENST00000402434 NKX2-5P52952 324 aaPredicted RBP13.42□□□□□ -0.26
RTN4-207ENST00000402434 RNF212Q495C1 297 aa13.42□□□□□ -0.26
RTN4-207ENST00000402434 TXNDC17Q9BRA2 123 aa13.42□□□□□ -0.26
RTN4-207ENST00000402434 IGKV3D-20A0A0C4DH25 116 aa13.41□□□□□ -0.26
RTN4-207ENST00000402434 M0R2P5 195 aa13.41□□□□□ -0.26
RTN4-207ENST00000402434 NUDT3O95989 172 aa13.4□□□□□ -0.26
RTN4-207ENST00000402434 ZNF674Q2M3X9 581 aa13.39□□□□□ -0.27
RTN4-207ENST00000402434 ALKAL2Q6UX46 152 aa13.39□□□□□ -0.27
RTN4-207ENST00000402434 C11orf52Q96A22 123 aa13.39□□□□□ -0.27
RTN4-207ENST00000402434 VSIG2Q96IQ7 327 aa13.39□□□□□ -0.27
RTN4-207ENST00000402434 C9orf85Q96MD7 179 aa13.39□□□□□ -0.27
RTN4-207ENST00000402434 A0A0J9YY99 117 aa13.38□□□□□ -0.27
RTN4-207ENST00000402434 RNASE3P12724 160 aaKnown RBP13.38□□□□□ -0.27
RTN4-207ENST00000402434 FHL2Q14192 279 aa13.38□□□□□ -0.27
RTN4-207ENST00000402434 FAM162BQ5T6X4 162 aa13.38□□□□□ -0.27
RTN4-207ENST00000402434 MLST8Q9BVC4 326 aa13.38□□□□□ -0.27
RTN4-207ENST00000402434 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
RTN4-207ENST00000402434 VPS13DQ5THJ4 4388 aa13.37□□□□□ -0.27
RTN4-207ENST00000402434 SH2D1AO60880 128 aa13.37□□□□□ -0.27
RTN4-207ENST00000402434 IGHV3-53P01767 116 aa13.37□□□□□ -0.27
RTN4-207ENST00000402434 MEF2BQ02080 365 aaPredicted RBP13.37□□□□□ -0.27
RTN4-207ENST00000402434 SLAQ13239 276 aa13.37□□□□□ -0.27
RTN4-207ENST00000402434 PTH2Q96A98 100 aa13.37□□□□□ -0.27
RTN4-207ENST00000402434 ORM1P02763 201 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 UBE2DNLQ8IWF7 75 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 ZNF479Q96JC4 524 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 PRO0255Q9UI72 69 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 TRAV4A0A0B4J268 109 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 KRBOX1C9JBD0 128 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 IFNA1P01562 189 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 BCL2P10415 239 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 RPL35P42766 123 aaKnown RBP13.36□□□□□ -0.27
RTN4-207ENST00000402434 FAM3BP58499 235 aaPredicted RBP13.36□□□□□ -0.27
RTN4-207ENST00000402434 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 DNLZQ5SXM8 178 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 ZNF575Q86XF7 245 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 BAGE2Q86Y30 109 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 NHLRC2Q8NBF2 726 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 LYPD6BQ8NI32 183 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 HHLA3Q9XRX5 114 aa13.36□□□□□ -0.27
RTN4-207ENST00000402434 NACAE9PAV3 2078 aa13.35□□□□□ -0.27
RTN4-207ENST00000402434 B4DEV8 164 aa13.35□□□□□ -0.27
RTN4-207ENST00000402434 PDE6DO43924 150 aa13.35□□□□□ -0.27
RTN4-207ENST00000402434 SFTA3P0C7M3 94 aa13.35□□□□□ -0.27
RTN4-207ENST00000402434 CRYBA4P53673 196 aa13.35□□□□□ -0.27
RTN4-207ENST00000402434 ZNF876PQ49A33 203 aa13.35□□□□□ -0.27
RTN4-207ENST00000402434 TAGLN2P37802 199 aaKnown RBP13.34□□□□□ -0.27
RTN4-207ENST00000402434 ASIPP42127 132 aa13.34□□□□□ -0.27
RTN4-207ENST00000402434 LINC01559Q495D7 138 aa13.34□□□□□ -0.27
RTN4-207ENST00000402434 OR4C5Q8NGB2 326 aa13.34□□□□□ -0.27
RTN4-207ENST00000402434 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
RTN4-207ENST00000402434 IL36BQ9NZH7 164 aa13.34□□□□□ -0.27
RTN4-207ENST00000402434 VAX2Q9UIW0 290 aa13.34□□□□□ -0.27
RTN4-207ENST00000402434 PGPEP1LA6NFU8 196 aa13.33□□□□□ -0.28
RTN4-207ENST00000402434 C9JCJ5 164 aa13.33□□□□□ -0.28
RTN4-207ENST00000402434 PAX4O43316 350 aa13.33□□□□□ -0.28
RTN4-207ENST00000402434 S100A4P26447 101 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms