RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 AGPAT4-IT1Q9H0P7 198 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 IGKV1OR2-108A0A075B7D4 117 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 CIDEAO60543 219 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 CRYGCP07315 174 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 ZNF114Q8NC26 417 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 NUP35Q8NFH5 326 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 C16orf74Q96GX8 76 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 LENEPQ9Y5L5 61 aa11.17□□□□□ -0.62
GABPA-202ENST00000400075 IGHV3-38A0A0C4DH36 116 aa11.16□□□□□ -0.62
GABPA-202ENST00000400075 CRLF1O75462 422 aa11.16□□□□□ -0.62
GABPA-202ENST00000400075 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
GABPA-202ENST00000400075 WIPF3A6NGB9 483 aa11.16□□□□□ -0.62
GABPA-202ENST00000400075 IGLL1P15814 213 aa11.16□□□□□ -0.62
GABPA-202ENST00000400075 OR2K2Q8NGT1 345 aa11.16□□□□□ -0.62
GABPA-202ENST00000400075 F8W735 103 aaPredicted RBP11.15□□□□□ -0.62
GABPA-202ENST00000400075 C16orf54Q6UWD8 224 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 UQCR10Q9UDW1 63 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 ICOSQ9Y6W8 199 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 ARHGAP32A7KAX9 2087 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 BUB3O43684 328 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 LYL1P12980 280 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 LINC01006Q8NI28 216 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 H3BMM0 161 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 IFITM2Q01629 132 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 PRR31Q5SQ13 230 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 UBE2WQ96B02 151 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 ESM1Q9NQ30 184 aa11.15□□□□□ -0.62
GABPA-202ENST00000400075 GGTLC3B5MD39 225 aa11.15□□□□□ -0.63
GABPA-202ENST00000400075 IGLL5B9A064 214 aa11.15□□□□□ -0.63
GABPA-202ENST00000400075 DEFB4AO15263 64 aa11.15□□□□□ -0.63
GABPA-202ENST00000400075 KLF5Q13887 457 aaPredicted RBP11.15□□□□□ -0.63
GABPA-202ENST00000400075 PMCHL2Q9BQD1 86 aa11.15□□□□□ -0.63
GABPA-202ENST00000400075 C1orf43Q9BWL3 253 aa11.15□□□□□ -0.63
GABPA-202ENST00000400075 SDHAF1A6NFY7 115 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 DEFB125Q8N687 156 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 VPS25Q9BRG1 176 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 CBY1Q9Y3M2 126 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 SERF1AO75920 110 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 SMKR1H3BMG3 65 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 NIT1Q86X76 327 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 C17orf77Q96MU5 243 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 I3L3M4 83 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 PET117Q6UWS5 81 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 DYNAPQ8N1N2 210 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 ZNF492Q9P255 531 aa11.14□□□□□ -0.63
GABPA-202ENST00000400075 PRR20EP86478 221 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 PRR20CP86479 221 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 PRR20DP86480 221 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 PRR20BP86481 221 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 PRR20AP86496 221 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 ARHGAP21Q5T5U3 1957 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 ADMP35318 185 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 TEX22C9J3V5 150 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 SMIM6P0DI80 62 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 PRIMA1Q86XR5 153 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 SIGLEC8Q9NYZ4 499 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 PLXNB1O43157 2135 aa11.13□□□□□ -0.63
GABPA-202ENST00000400075 IGF1P05019 195 aa11.12□□□□□ -0.63
GABPA-202ENST00000400075 SRSF3P84103 164 aaKnown RBP11.12□□□□□ -0.63
GABPA-202ENST00000400075 FXYD5Q96DB9 178 aa11.12□□□□□ -0.63
GABPA-202ENST00000400075 LAMTOR2Q9Y2Q5 125 aa11.12□□□□□ -0.63
GABPA-202ENST00000400075 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
GABPA-202ENST00000400075 PLEKHB2Q96CS7 222 aa11.12□□□□□ -0.63
GABPA-202ENST00000400075 GYPEP15421 78 aa11.12□□□□□ -0.63
GABPA-202ENST00000400075 ODF3L1Q8IXM7 274 aa11.12□□□□□ -0.63
GABPA-202ENST00000400075 SPATA25Q9BR10 227 aa11.12□□□□□ -0.63
GABPA-202ENST00000400075 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 TMEM213A2RRL7 107 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 LINC01548A6NM66 108 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 SNAI2O43623 268 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 FABP2P12104 132 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 ZNF295-AS1Q8N0V1 137 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 C11orf45Q8TAV5 145 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 GFRA4Q9GZZ7 299 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 UBE2CO00762 179 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 TRBV12-3P01733 135 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 TMEM242Q9NWH2 141 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 FAM231BA6NCW3 169 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 ZNF815PA8K554 130 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
GABPA-202ENST00000400075 SPRY2O43597 315 aa11.1□□□□□ -0.63
GABPA-202ENST00000400075 IGKCP01834 107 aa11.1□□□□□ -0.63
GABPA-202ENST00000400075 IGHV1-24A0A0C4DH33 117 aa11.1□□□□□ -0.63
GABPA-202ENST00000400075 GNRH2O43555 120 aa11.1□□□□□ -0.63
GABPA-202ENST00000400075 MUC22E2RYF6 1773 aaPredicted RBP11.1□□□□□ -0.63
GABPA-202ENST00000400075 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
GABPA-202ENST00000400075 PRSS46E5RG02 174 aa11.1□□□□□ -0.63
GABPA-202ENST00000400075 TMEM170AQ8WVE7 144 aa11.1□□□□□ -0.63
GABPA-202ENST00000400075 DMRT1Q9Y5R6 373 aa11.1□□□□□ -0.63
GABPA-202ENST00000400075 UNQ9165/PRO28630Q6UXU0 137 aa11.09□□□□□ -0.63
GABPA-202ENST00000400075 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
GABPA-202ENST00000400075 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
GABPA-202ENST00000400075 CLPSL2Q6UWE3 100 aa11.09□□□□□ -0.63
GABPA-202ENST00000400075 ADAMTSL5Q6ZMM2 481 aa11.09□□□□□ -0.63
GABPA-202ENST00000400075 LINC00574Q9H8X3 128 aa11.09□□□□□ -0.63
GABPA-202ENST00000400075 PGPEP1Q9NXJ5 209 aa11.09□□□□□ -0.63
GABPA-202ENST00000400075 RBAKDNA6NC62 111 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms