RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 VPS13DQ5THJ4 4388 aa18.15■□□□□ 0.5
U2AF1-203ENST00000398137 LY6G6CO95867 125 aa18.15■□□□□ 0.5
U2AF1-203ENST00000398137 ANXA2RQ3ZCQ2 193 aa18.15■□□□□ 0.5
U2AF1-203ENST00000398137 FAM159AQ6UWV7 190 aa18.15■□□□□ 0.5
U2AF1-203ENST00000398137 COX8CQ7Z4L0 72 aa18.15■□□□□ 0.5
U2AF1-203ENST00000398137 C11orf45Q8TAV5 145 aa18.15■□□□□ 0.5
U2AF1-203ENST00000398137 C11orf21Q9P2W6 132 aa18.15■□□□□ 0.5
U2AF1-203ENST00000398137 CEBPGP53567 150 aa18.14■□□□□ 0.49
U2AF1-203ENST00000398137 FAM222AQ5U5X8 452 aa18.14■□□□□ 0.49
U2AF1-203ENST00000398137 TMEM250H0YL14 139 aa18.13■□□□□ 0.49
U2AF1-203ENST00000398137 SH2D1AO60880 128 aa18.13■□□□□ 0.49
U2AF1-203ENST00000398137 DKK2Q9UBU2 259 aa18.13■□□□□ 0.49
U2AF1-203ENST00000398137 GNG4P50150 75 aa18.12■□□□□ 0.49
U2AF1-203ENST00000398137 CRIP1P50238 77 aa18.12■□□□□ 0.49
U2AF1-203ENST00000398137 ZNF674Q2M3X9 581 aa18.12■□□□□ 0.49
U2AF1-203ENST00000398137 FAM162BQ5T6X4 162 aa18.12■□□□□ 0.49
U2AF1-203ENST00000398137 C11orf72Q8NBR9 251 aa18.12■□□□□ 0.49
U2AF1-203ENST00000398137 MLST8Q9BVC4 326 aa18.12■□□□□ 0.49
U2AF1-203ENST00000398137 PARLQ9H300 379 aa18.12■□□□□ 0.49
U2AF1-203ENST00000398137 GSN-AS1Q9NRJ2 163 aa18.12■□□□□ 0.49
U2AF1-203ENST00000398137 KLK5Q9Y337 293 aaPredicted RBP18.12■□□□□ 0.49
U2AF1-203ENST00000398137 FRAS1Q86XX4 4008 aa18.12■□□□□ 0.49
U2AF1-203ENST00000398137 TRBV20OR9-2A0A075B6H5 130 aa18.11■□□□□ 0.49
U2AF1-203ENST00000398137 FABP5P3A8MUU1 101 aa18.11■□□□□ 0.49
U2AF1-203ENST00000398137 SNURFLB1AK76 121 aa18.11■□□□□ 0.49
U2AF1-203ENST00000398137 SPART-AS1P0CW21 52 aa18.11■□□□□ 0.49
U2AF1-203ENST00000398137 TDRG1Q3Y452 100 aa18.11■□□□□ 0.49
U2AF1-203ENST00000398137 CLLU1Q5K131 121 aa18.11■□□□□ 0.49
U2AF1-203ENST00000398137 SDF2L1Q9HCN8 221 aa18.11■□□□□ 0.49
U2AF1-203ENST00000398137 NOP10Q9NPE3 64 aaKnown RBP18.11■□□□□ 0.49
U2AF1-203ENST00000398137 TRGV11A0A075B6L2 103 aa18.1■□□□□ 0.49
U2AF1-203ENST00000398137 SRP19P09132 144 aaKnown RBP18.1■□□□□ 0.49
U2AF1-203ENST00000398137 SRSF3P84103 164 aaKnown RBP18.1■□□□□ 0.49
U2AF1-203ENST00000398137 TIMM8BQ9Y5J9 83 aaPredicted RBP18.1■□□□□ 0.49
U2AF1-203ENST00000398137 TEX48A0A1B0GUV7 120 aa18.09■□□□□ 0.49
U2AF1-203ENST00000398137 PGPEP1LA6NFU8 196 aa18.09■□□□□ 0.49
U2AF1-203ENST00000398137 TYMSP04818 313 aa18.09■□□□□ 0.49
U2AF1-203ENST00000398137 ZNF415Q09FC8 603 aa18.09■□□□□ 0.49
U2AF1-203ENST00000398137 IBA57Q5T440 356 aaKnown RBP18.09■□□□□ 0.49
U2AF1-203ENST00000398137 PRR27Q6MZM9 219 aa18.09■□□□□ 0.49
U2AF1-203ENST00000398137 KCNS1Q96KK3 526 aa18.09■□□□□ 0.49
U2AF1-203ENST00000398137 LYRM9A8MSI8 78 aa18.08■□□□□ 0.48
U2AF1-203ENST00000398137 GNRH2O43555 120 aa18.08■□□□□ 0.48
U2AF1-203ENST00000398137 NDUFS6O75380 124 aaKnown RBP18.08■□□□□ 0.48
U2AF1-203ENST00000398137 IGLV2-8P01709 118 aa18.08■□□□□ 0.48
U2AF1-203ENST00000398137 MGST1P10620 155 aaKnown RBP18.08■□□□□ 0.48
U2AF1-203ENST00000398137 TCL1AP56279 114 aa18.08■□□□□ 0.48
U2AF1-203ENST00000398137 MDFICQ9P1T7 246 aa18.08■□□□□ 0.48
U2AF1-203ENST00000398137 M0R036 132 aa18.07■□□□□ 0.48
U2AF1-203ENST00000398137 ORM1P02763 201 aa18.07■□□□□ 0.48
U2AF1-203ENST00000398137 PEA15Q15121 130 aa18.07■□□□□ 0.48
U2AF1-203ENST00000398137 C12orf74Q32Q52 190 aa18.07■□□□□ 0.48
U2AF1-203ENST00000398137 DNAH10Q8IVF4 4471 aa18.06■□□□□ 0.48
U2AF1-203ENST00000398137 IGHV3-16A0A0C4DH30 117 aa18.06■□□□□ 0.48
U2AF1-203ENST00000398137 C9JQL5 133 aa18.06■□□□□ 0.48
U2AF1-203ENST00000398137 Q6ZTC4 211 aa18.06■□□□□ 0.48
U2AF1-203ENST00000398137 IGKV3D-20A0A0C4DH25 116 aa18.05■□□□□ 0.48
U2AF1-203ENST00000398137 C9JCJ5 164 aa18.05■□□□□ 0.48
U2AF1-203ENST00000398137 DEFB130BP0DP73 79 aa18.05■□□□□ 0.48
U2AF1-203ENST00000398137 DEFB130AP0DP74 79 aa18.05■□□□□ 0.48
U2AF1-203ENST00000398137 DAD1P61803 113 aa18.05■□□□□ 0.48
U2AF1-203ENST00000398137 DAZ2Q13117 558 aaKnown RBP18.05■□□□□ 0.48
U2AF1-203ENST00000398137 SMIM12Q96EX1 92 aa18.05■□□□□ 0.48
U2AF1-203ENST00000398137 B4DEV8 164 aa18.04■□□□□ 0.48
U2AF1-203ENST00000398137 SMIM7Q9BQ49 75 aa18.04■□□□□ 0.48
U2AF1-203ENST00000398137 LGALS9CQ6DKI2 356 aa18.03■□□□□ 0.48
U2AF1-203ENST00000398137 DNAH6Q9C0G6 4158 aa18.03■□□□□ 0.48
U2AF1-203ENST00000398137 TMSB15BA0A087X1C1 80 aa18.02■□□□□ 0.48
U2AF1-203ENST00000398137 KRBOX1C9JBD0 128 aa18.02■□□□□ 0.48
U2AF1-203ENST00000398137 LINC01559Q495D7 138 aa18.02■□□□□ 0.48
U2AF1-203ENST00000398137 Q6ZTI0 123 aa18.02■□□□□ 0.48
U2AF1-203ENST00000398137 MRPL16Q9NX20 251 aaKnown RBP18.02■□□□□ 0.48
U2AF1-203ENST00000398137 TRGV1A0A0A0MS02 117 aa18.01■□□□□ 0.47
U2AF1-203ENST00000398137 GAGE12BA1L429 117 aa18.01■□□□□ 0.47
U2AF1-203ENST00000398137 ZNF727A8MUV8 499 aa18.01■□□□□ 0.47
U2AF1-203ENST00000398137 GAGE7O76087 117 aa18.01■□□□□ 0.47
U2AF1-203ENST00000398137 GAGE12FP0CL80 117 aa18.01■□□□□ 0.47
U2AF1-203ENST00000398137 GAGE12GP0CL81 117 aa18.01■□□□□ 0.47
U2AF1-203ENST00000398137 GAGE12IP0CL82 117 aa18.01■□□□□ 0.47
U2AF1-203ENST00000398137 OR5I1Q13606 314 aa18.01■□□□□ 0.47
U2AF1-203ENST00000398137 ASIPP42127 132 aa18■□□□□ 0.47
U2AF1-203ENST00000398137 RPL19P84098 196 aaKnown RBP18■□□□□ 0.47
U2AF1-203ENST00000398137 LINC00612Q8N6U2 182 aa18■□□□□ 0.47
U2AF1-203ENST00000398137 OCC1Q8TAD7 63 aa18■□□□□ 0.47
U2AF1-203ENST00000398137 SMDT1Q9H4I9 107 aa18■□□□□ 0.47
U2AF1-203ENST00000398137 GRIFINA4D1Z8 144 aa17.99■□□□□ 0.47
U2AF1-203ENST00000398137 K7EN84 100 aa17.99■□□□□ 0.47
U2AF1-203ENST00000398137 SPINK4O60575 86 aa17.99■□□□□ 0.47
U2AF1-203ENST00000398137 BIN3Q9NQY0 253 aa17.99■□□□□ 0.47
U2AF1-203ENST00000398137 APLNQ9ULZ1 77 aa17.99■□□□□ 0.47
U2AF1-203ENST00000398137 S100A4P26447 101 aaKnown RBP17.98■□□□□ 0.47
U2AF1-203ENST00000398137 DAZAP1Q96EP5 407 aaKnown RBP17.98■□□□□ 0.47
U2AF1-203ENST00000398137 SPXQ9BT56 116 aa17.98■□□□□ 0.47
U2AF1-203ENST00000398137 TRAV10A0A0B4J240 114 aa17.97■□□□□ 0.47
U2AF1-203ENST00000398137 C19orf71A6NCJ1 209 aa17.97■□□□□ 0.47
U2AF1-203ENST00000398137 RNASE3P12724 160 aaKnown RBP17.97■□□□□ 0.47
U2AF1-203ENST00000398137 HTN3P15516 51 aa17.97■□□□□ 0.47
U2AF1-203ENST00000398137 C9orf85Q96MD7 179 aa17.97■□□□□ 0.47
U2AF1-203ENST00000398137 H3BVH4 76 aa17.96■□□□□ 0.47
U2AF1-203ENST00000398137 TRGV2A0A075B6R0 118 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms