RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 SYNJ2BPP57105 145 aa12.84□□□□□ -0.35
CTDSP2-201ENST00000398073 TEX22C9J3V5 150 aa12.84□□□□□ -0.35
CTDSP2-201ENST00000398073 H3BMG7 143 aa12.84□□□□□ -0.35
CTDSP2-201ENST00000398073 C12orf74Q32Q52 190 aa12.84□□□□□ -0.35
CTDSP2-201ENST00000398073 CFAP161Q6P656 301 aa12.84□□□□□ -0.35
CTDSP2-201ENST00000398073 PPDPFLQ8WWR9 84 aa12.84□□□□□ -0.35
CTDSP2-201ENST00000398073 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
CTDSP2-201ENST00000398073 GNLYP22749 145 aa12.83□□□□□ -0.36
CTDSP2-201ENST00000398073 C2orf70A6NJV1 201 aa12.83□□□□□ -0.36
CTDSP2-201ENST00000398073 IGF2-ASQ6U949 168 aa12.83□□□□□ -0.36
CTDSP2-201ENST00000398073 ZNF493Q6ZR52 646 aa12.83□□□□□ -0.36
CTDSP2-201ENST00000398073 LINC00574Q9H8X3 128 aa12.83□□□□□ -0.36
CTDSP2-201ENST00000398073 A0A1B0GXF2 115 aa12.83□□□□□ -0.36
CTDSP2-201ENST00000398073 TRBV25-1A0A075B6N4 114 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 CHCHD5Q9BSY4 110 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 IGKV1D-37A0A075B6S9 117 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 MSMBP08118 114 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 SPINK13Q1W4C9 94 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 IGHV1OR15-1A0A075B7D0 117 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 TRGV1A0A0A0MS02 117 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 I3L3M4 83 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 RHODO00212 210 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 INSP01308 110 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 FOXE3Q13461 319 aa12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
CTDSP2-201ENST00000398073 TNRC6AQ8NDV7 1962 aaKnown RBP12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 CTSGP08311 255 aa12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 TAX1BP3O14907 124 aa12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 IGFBPL1Q8WX77 278 aa12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 C1orf159Q96HA4 380 aa12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 CMC4P56277 68 aaPredicted RBP12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 LINC00158P58513 81 aa12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 DEFB131AP59861 70 aa12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 MSRB1Q9NZV6 116 aa12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 SPG11Q96JI7 2443 aa12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 PRO1854Q9UHT4 67 aa12.81□□□□□ -0.36
CTDSP2-201ENST00000398073 WI2-2373I1.2A0A1W2PRP0 233 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 AMTNQ6UX39 209 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 TMEM86BQ8N661 226 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 IGHV7-81A0A0B4J1V7 117 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 GAGE12HA6NDE8 117 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 PRSS29PA6NIE9 313 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 WISP2O76076 250 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 CRPP02741 224 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 GATA3P23771 443 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
CTDSP2-201ENST00000398073 HOXB4P17483 251 aaPredicted RBP12.79□□□□□ -0.36
CTDSP2-201ENST00000398073 IGHV7-4-1A0A0J9YVY3 117 aa12.79□□□□□ -0.36
CTDSP2-201ENST00000398073 PRIMA1Q86XR5 153 aa12.79□□□□□ -0.36
CTDSP2-201ENST00000398073 PHLDA1Q8WV24 401 aaPredicted RBP12.79□□□□□ -0.36
CTDSP2-201ENST00000398073 J3QQQ9 107 aa12.79□□□□□ -0.36
CTDSP2-201ENST00000398073 MBD6Q96DN6 1003 aa12.78□□□□□ -0.36
CTDSP2-201ENST00000398073 KLK9Q9UKQ9 250 aa12.78□□□□□ -0.36
CTDSP2-201ENST00000398073 BUB3O43684 328 aa12.78□□□□□ -0.36
CTDSP2-201ENST00000398073 CTRLP40313 264 aa12.78□□□□□ -0.36
CTDSP2-201ENST00000398073 C11orf44Q8N8P7 122 aa12.78□□□□□ -0.36
CTDSP2-201ENST00000398073 TRAV8-3A0A0A6YYJ7 113 aa12.78□□□□□ -0.36
CTDSP2-201ENST00000398073 H3BUA1 57 aa12.78□□□□□ -0.36
CTDSP2-201ENST00000398073 SRSF2Q01130 221 aaKnown RBP12.78□□□□□ -0.36
CTDSP2-201ENST00000398073 GOLGB1Q14789 3259 aaKnown RBP12.78□□□□□ -0.36
CTDSP2-201ENST00000398073 UTF1Q5T230 341 aa12.77□□□□□ -0.36
CTDSP2-201ENST00000398073 TRAV13-1A0A0B4J241 112 aa12.77□□□□□ -0.36
CTDSP2-201ENST00000398073 KNCNA6PVL3 124 aa12.77□□□□□ -0.36
CTDSP2-201ENST00000398073 TP53TG3Q9ULZ0 132 aa12.77□□□□□ -0.36
CTDSP2-201ENST00000398073 SPATA12Q7Z6I5 190 aa12.77□□□□□ -0.37
CTDSP2-201ENST00000398073 LINC01356Q8N9X3 169 aa12.77□□□□□ -0.37
CTDSP2-201ENST00000398073 MLST8Q9BVC4 326 aa12.77□□□□□ -0.37
CTDSP2-201ENST00000398073 HIGD1BQ9P298 99 aa12.77□□□□□ -0.37
CTDSP2-201ENST00000398073 CENPVL3A0A0U1RRI6 287 aa12.76□□□□□ -0.37
CTDSP2-201ENST00000398073 FGF6P10767 208 aa12.76□□□□□ -0.37
CTDSP2-201ENST00000398073 DAZAP2Q15038 168 aaPredicted RBP12.76□□□□□ -0.37
CTDSP2-201ENST00000398073 C1orf229Q6ZS94 237 aaPredicted RBP12.76□□□□□ -0.37
CTDSP2-201ENST00000398073 WDR87Q6ZQQ6 2873 aa12.76□□□□□ -0.37
CTDSP2-201ENST00000398073 GDF5OSQ5U4N7 250 aa12.76□□□□□ -0.37
CTDSP2-201ENST00000398073 MALP21145 153 aa12.76□□□□□ -0.37
CTDSP2-201ENST00000398073 GRNP28799 593 aaKnown RBP12.76□□□□□ -0.37
CTDSP2-201ENST00000398073 TRAV12-2A0A075B6T6 113 aa12.75□□□□□ -0.37
CTDSP2-201ENST00000398073 IGHV3-53P01767 116 aa12.75□□□□□ -0.37
CTDSP2-201ENST00000398073 LINC00322Q6ZN03 302 aaPredicted RBP12.75□□□□□ -0.37
CTDSP2-201ENST00000398073 LEPROTO15243 131 aa12.75□□□□□ -0.37
CTDSP2-201ENST00000398073 GHRHP01286 108 aa12.75□□□□□ -0.37
CTDSP2-201ENST00000398073 NDUFA12Q9UI09 145 aa12.75□□□□□ -0.37
CTDSP2-201ENST00000398073 IGLL5B9A064 214 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 PAX4O43316 350 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 F6UB75 175 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 H3BMM0 161 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 GNRH2O43555 120 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 TCF15Q12870 199 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 KLHL30-AS1Q8NEE0 82 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 UBE2WQ96B02 151 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 DYSFO75923 2080 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 UBE2E2Q96LR5 201 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 AZU1P20160 251 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 ZNF48Q96MX3 618 aaPredicted RBP12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 OVOL2Q9BRP0 275 aa12.74□□□□□ -0.37
CTDSP2-201ENST00000398073 TEX48A0A1B0GUV7 120 aa12.73□□□□□ -0.37
CTDSP2-201ENST00000398073 Q8N9W7 124 aa12.73□□□□□ -0.37
CTDSP2-201ENST00000398073 FXYD2P54710 66 aa12.73□□□□□ -0.37
CTDSP2-201ENST00000398073 RHOHQ15669 191 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms