RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 Q86TA4 180 aa17.94■□□□□ 0.46
TSPAN4-207ENST00000397411 MDFICQ9P1T7 246 aa17.94■□□□□ 0.46
TSPAN4-207ENST00000397411 GNRH2O43555 120 aa17.93■□□□□ 0.46
TSPAN4-207ENST00000397411 S100A9P06702 114 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-207ENST00000397411 PFN1P07737 140 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-207ENST00000397411 BOLA1Q9Y3E2 137 aa17.93■□□□□ 0.46
TSPAN4-207ENST00000397411 SPINK4O60575 86 aa17.92■□□□□ 0.46
TSPAN4-207ENST00000397411 TDRG1Q3Y452 100 aa17.92■□□□□ 0.46
TSPAN4-207ENST00000397411 TMEM88Q6PEY1 159 aa17.92■□□□□ 0.46
TSPAN4-207ENST00000397411 LINC00612Q8N6U2 182 aa17.92■□□□□ 0.46
TSPAN4-207ENST00000397411 SCO2A0A1W2PP80 73 aa17.91■□□□□ 0.46
TSPAN4-207ENST00000397411 FABP5P3A8MUU1 101 aa17.91■□□□□ 0.46
TSPAN4-207ENST00000397411 OR5I1Q13606 314 aa17.91■□□□□ 0.46
TSPAN4-207ENST00000397411 LGALS9CQ6DKI2 356 aa17.91■□□□□ 0.46
TSPAN4-207ENST00000397411 SPXQ9BT56 116 aa17.91■□□□□ 0.46
TSPAN4-207ENST00000397411 MRPL16Q9NX20 251 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-207ENST00000397411 BLOC1S1P78537 153 aa17.9■□□□□ 0.46
TSPAN4-207ENST00000397411 LGALS9BQ3B8N2 356 aa17.9■□□□□ 0.46
TSPAN4-207ENST00000397411 TRBV6-1A0A0K0K1D8 114 aa17.89■□□□□ 0.45
TSPAN4-207ENST00000397411 TYMSP04818 313 aa17.89■□□□□ 0.45
TSPAN4-207ENST00000397411 TXNDC17Q9BRA2 123 aa17.89■□□□□ 0.45
TSPAN4-207ENST00000397411 KMT2CQ8NEZ4 4911 aaKnown RBP17.88■□□□□ 0.45
TSPAN4-207ENST00000397411 IGHV3-16A0A0C4DH30 117 aa17.87■□□□□ 0.45
TSPAN4-207ENST00000397411 LTAP01374 205 aa17.86■□□□□ 0.45
TSPAN4-207ENST00000397411 ORM1P02763 201 aa17.86■□□□□ 0.45
TSPAN4-207ENST00000397411 C15orf53Q8NAA6 179 aa17.86■□□□□ 0.45
TSPAN4-207ENST00000397411 ZC2HC1AQ96GY0 325 aa17.86■□□□□ 0.45
TSPAN4-207ENST00000397411 C11orf21Q9P2W6 132 aa17.86■□□□□ 0.45
TSPAN4-207ENST00000397411 DYNC2H1Q8NCM8 4307 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-207ENST00000397411 FAM162BQ5T6X4 162 aa17.85■□□□□ 0.45
TSPAN4-207ENST00000397411 BAGE2Q86Y30 109 aa17.85■□□□□ 0.45
TSPAN4-207ENST00000397411 M0R2P5 195 aa17.84■□□□□ 0.45
TSPAN4-207ENST00000397411 NUDT3O95989 172 aa17.84■□□□□ 0.45
TSPAN4-207ENST00000397411 P0DMU3 169 aa17.84■□□□□ 0.45
TSPAN4-207ENST00000397411 FAM231AP0DMU4 169 aa17.84■□□□□ 0.45
TSPAN4-207ENST00000397411 FAM231CP0DMU5 169 aa17.84■□□□□ 0.45
TSPAN4-207ENST00000397411 TAGLN2P37802 199 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-207ENST00000397411 NHLRC2Q8NBF2 726 aa17.84■□□□□ 0.45
TSPAN4-207ENST00000397411 VAX2Q9UIW0 290 aa17.84■□□□□ 0.45
TSPAN4-207ENST00000397411 IGHV3-53P01767 116 aa17.83■□□□□ 0.44
TSPAN4-207ENST00000397411 BCL2P10415 239 aa17.83■□□□□ 0.44
TSPAN4-207ENST00000397411 S100A4P26447 101 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-207ENST00000397411 MEF2BQ02080 365 aaPredicted RBP17.83■□□□□ 0.44
TSPAN4-207ENST00000397411 C18orf15Q96N68 181 aa17.83■□□□□ 0.44
TSPAN4-207ENST00000397411 B4DEV8 164 aa17.82■□□□□ 0.44
TSPAN4-207ENST00000397411 PDE6DO43924 150 aa17.82■□□□□ 0.44
TSPAN4-207ENST00000397411 SH2D1AO60880 128 aa17.82■□□□□ 0.44
TSPAN4-207ENST00000397411 HOXA5P20719 270 aa17.82■□□□□ 0.44
TSPAN4-207ENST00000397411 PLECQ15149 4684 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-207ENST00000397411 UBE2DNLQ8IWF7 75 aa17.82■□□□□ 0.44
TSPAN4-207ENST00000397411 TRAV26-1A0A087WT03 109 aa17.81■□□□□ 0.44
TSPAN4-207ENST00000397411 A0A0J9YY99 117 aa17.81■□□□□ 0.44
TSPAN4-207ENST00000397411 RPL35P42766 123 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-207ENST00000397411 CRIP1P50238 77 aa17.81■□□□□ 0.44
TSPAN4-207ENST00000397411 COX8CQ7Z4L0 72 aa17.81■□□□□ 0.44
TSPAN4-207ENST00000397411 RASL10AQ92737 203 aa17.81■□□□□ 0.44
TSPAN4-207ENST00000397411 MED9Q9NWA0 146 aa17.81■□□□□ 0.44
TSPAN4-207ENST00000397411 C9JCJ5 164 aa17.8■□□□□ 0.44
TSPAN4-207ENST00000397411 M0R036 132 aa17.8■□□□□ 0.44
TSPAN4-207ENST00000397411 C11orf52Q96A22 123 aa17.8■□□□□ 0.44
TSPAN4-207ENST00000397411 IGKV3D-20A0A0C4DH25 116 aa17.79■□□□□ 0.44
TSPAN4-207ENST00000397411 ASIPP42127 132 aa17.79■□□□□ 0.44
TSPAN4-207ENST00000397411 ZNF674Q2M3X9 581 aa17.79■□□□□ 0.44
TSPAN4-207ENST00000397411 TRGV4A0A0C4DH28 118 aa17.78■□□□□ 0.44
TSPAN4-207ENST00000397411 OR4C5Q8NGB2 326 aa17.78■□□□□ 0.44
TSPAN4-207ENST00000397411 MUC4Q99102 2169 aa17.77■□□□□ 0.44
TSPAN4-207ENST00000397411 ALMS1Q8TCU4 4167 aa17.77■□□□□ 0.44
TSPAN4-207ENST00000397411 SLAQ13239 276 aa17.77■□□□□ 0.44
TSPAN4-207ENST00000397411 ZNF876PQ49A33 203 aa17.77■□□□□ 0.44
TSPAN4-207ENST00000397411 DERL1Q9BUN8 251 aa17.77■□□□□ 0.44
TSPAN4-207ENST00000397411 TMSB15BA0A087X1C1 80 aa17.76■□□□□ 0.43
TSPAN4-207ENST00000397411 KRBOX1C9JBD0 128 aa17.76■□□□□ 0.43
TSPAN4-207ENST00000397411 PRR27Q6MZM9 219 aa17.76■□□□□ 0.43
TSPAN4-207ENST00000397411 POM121L12Q8N7R1 296 aa17.76■□□□□ 0.43
TSPAN4-207ENST00000397411 NACAE9PAV3 2078 aa17.76■□□□□ 0.43
TSPAN4-207ENST00000397411 GRIFINA4D1Z8 144 aa17.75■□□□□ 0.43
TSPAN4-207ENST00000397411 RBFOX3A6NFN3 312 aa17.75■□□□□ 0.43
TSPAN4-207ENST00000397411 PAX4O43316 350 aa17.75■□□□□ 0.43
TSPAN4-207ENST00000397411 C9orf85Q96MD7 179 aa17.75■□□□□ 0.43
TSPAN4-207ENST00000397411 HHLA3Q9XRX5 114 aa17.75■□□□□ 0.43
TSPAN4-207ENST00000397411 LYSTQ99698 3801 aa17.75■□□□□ 0.43
TSPAN4-207ENST00000397411 TRAV4A0A0B4J268 109 aa17.74■□□□□ 0.43
TSPAN4-207ENST00000397411 RAB19A4D1S5 217 aa17.74■□□□□ 0.43
TSPAN4-207ENST00000397411 SFTA3P0C7M3 94 aa17.74■□□□□ 0.43
TSPAN4-207ENST00000397411 MGST1P10620 155 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-207ENST00000397411 GNG4P50150 75 aa17.74■□□□□ 0.43
TSPAN4-207ENST00000397411 CENPWQ5EE01 88 aa17.74■□□□□ 0.43
TSPAN4-207ENST00000397411 ZNF479Q96JC4 524 aa17.74■□□□□ 0.43
TSPAN4-207ENST00000397411 MLST8Q9BVC4 326 aa17.74■□□□□ 0.43
TSPAN4-207ENST00000397411 H3BNG1 76 aa17.73■□□□□ 0.43
TSPAN4-207ENST00000397411 RNASE3P12724 160 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-207ENST00000397411 PRO0255Q9UI72 69 aa17.73■□□□□ 0.43
TSPAN4-207ENST00000397411 FHL2Q14192 279 aa17.72■□□□□ 0.43
TSPAN4-207ENST00000397411 RNF212Q495C1 297 aa17.72■□□□□ 0.43
TSPAN4-207ENST00000397411 LINC01559Q495D7 138 aa17.72■□□□□ 0.43
TSPAN4-207ENST00000397411 LYPD6BQ8NI32 183 aa17.72■□□□□ 0.43
TSPAN4-207ENST00000397411 DAZAP1Q96EP5 407 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-207ENST00000397411 EIF5A2Q9GZV4 153 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-207ENST00000397411 PGPEP1LA6NFU8 196 aa17.71■□□□□ 0.43
TSPAN4-207ENST00000397411 H3BVH4 76 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms