RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 CENPVL3A0A0U1RRI6 287 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 F8VRH5 84 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 MP68P56378 58 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 BLCAPP62952 87 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 BVES-AS1Q5T3Y7 98 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 FOXL2NBQ6ZUU3 175 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 RNF138Q8WVD3 245 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 PRO1854Q9UHT4 67 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 DEFB4AO15263 64 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 IGLC1P0CG04 106 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 RBM3P98179 157 aaKnown RBP5.67□□□□□ -1.5
UPF2-203ENST00000397053 C17orf58Q2M2W7 97 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 SLX1AQ9BQ83 275 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 STRCP1A6NGW2 1772 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 MARF1Q9Y4F3 1742 aaKnown RBP5.67□□□□□ -1.5
UPF2-203ENST00000397053 IGHV4-38-2P0DP08 117 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 CARD19Q96LW7 228 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 MRPL35Q9NZE8 188 aaKnown RBP5.67□□□□□ -1.5
UPF2-203ENST00000397053 ANKRD31Q8N7Z5 1873 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 PIP4P1Q86T03 277 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 VOPP1Q96AW1 172 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 C20orf78Q9BR46 151 aa5.67□□□□□ -1.5
UPF2-203ENST00000397053 RSPO3Q9BXY4 272 aaPredicted RBP5.67□□□□□ -1.5
UPF2-203ENST00000397053 PRRC2AP48634 2157 aaKnown RBP5.67□□□□□ -1.5
UPF2-203ENST00000397053 A0A1B0GX51 115 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 J3QRE1 110 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 GNRH2O43555 120 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 SEM1Q6ZVN7 128 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 ORMDL1Q9P0S3 153 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 DOCK4Q8N1I0 1966 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 RNF152Q8N8N0 203 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 C14orf132Q9NPU4 83 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 TMEM14CQ9P0S9 112 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 KLK12Q9UKR0 248 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 ADAMTS7Q9UKP4 1686 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 IGKV2-24A0A0C4DH68 120 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 IGLV1-44P01699 117 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 SEC61GP60059 68 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 NPBQ8NG41 125 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 RS1O15537 224 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 DIAPH2-AS1Q14236 149 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 AJUBAQ96IF1 538 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 IGKV1-6A0A0C4DH72 117 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 PRB2P02812 416 aaPredicted RBP5.66□□□□□ -1.5
UPF2-203ENST00000397053 C9orf47Q6ZRZ4 202 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 OPRPNQ99935 248 aaPredicted RBP5.66□□□□□ -1.5
UPF2-203ENST00000397053 AGPAT4-IT1Q9H0P7 198 aa5.66□□□□□ -1.5
UPF2-203ENST00000397053 TLN1Q9Y490 2541 aaKnown RBP5.65□□□□□ -1.5
UPF2-203ENST00000397053 HOXB4P17483 251 aaPredicted RBP5.65□□□□□ -1.5
UPF2-203ENST00000397053 HERV-K104P63124 156 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 C14orf177Q52M58 125 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 ZNF491Q8N8L2 437 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 C10orf105Q8TEF2 133 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 LY75O60449 1722 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 TP53BP1Q12888 1972 aaPredicted RBP5.65□□□□□ -1.5
UPF2-203ENST00000397053 SHISA9B4DS77 424 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 K7EM74 188 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 INSL3P51460 131 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 CRYBA4P53673 196 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 NREPQ16612 68 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 ARTNQ5T4W7 220 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 CYTL1Q9NRR1 136 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 LENEPQ9Y5L5 61 aa5.65□□□□□ -1.5
UPF2-203ENST00000397053 PPDPFLQ8WWR9 84 aa5.65□□□□□ -1.51
UPF2-203ENST00000397053 VSIG2Q96IQ7 327 aa5.65□□□□□ -1.51
UPF2-203ENST00000397053 SPANXA1Q9NS26 97 aa5.65□□□□□ -1.51
UPF2-203ENST00000397053 A8MWP6 167 aa5.65□□□□□ -1.51
UPF2-203ENST00000397053 NPYP01303 97 aa5.65□□□□□ -1.51
UPF2-203ENST00000397053 IGHV2-70P01814 119 aa5.65□□□□□ -1.51
UPF2-203ENST00000397053 C18orf32Q8TCD1 76 aa5.65□□□□□ -1.51
UPF2-203ENST00000397053 HHLA3Q9XRX5 114 aa5.65□□□□□ -1.51
UPF2-203ENST00000397053 ETDBQ3ZM63 59 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 C11orf45Q8TAV5 145 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 GTSF1Q8WW33 167 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 K7EQD1 137 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 WDR86Q86TI4 376 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 HLA-DMBP28068 263 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 SPAG11BQ08648 103 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 ZFP2Q6ZN57 461 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 CHD5Q8TDI0 1954 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 DYNAPQ8N1N2 210 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 WFDC9Q8NEX5 89 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 COX7B2Q8TF08 81 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 B9D2Q9BPU9 175 aa5.64□□□□□ -1.51
UPF2-203ENST00000397053 ANKRD36A6QL64 1941 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 H0Y9J4 135 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 DAZ2Q13117 558 aaKnown RBP5.63□□□□□ -1.51
UPF2-203ENST00000397053 DAZ4Q86SG3 579 aaKnown RBP5.63□□□□□ -1.51
UPF2-203ENST00000397053 SND1-IT1Q9HBX3 110 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 DAZ3Q9NR90 486 aaKnown RBP5.63□□□□□ -1.51
UPF2-203ENST00000397053 LTAP01374 205 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 QRFPP83859 136 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 ZC2HC1AQ96GY0 325 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 HIGD2AQ9BW72 106 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 BAALC-AS2P0C853 105 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 CTSZQ9UBR2 303 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 COLCA2A8K830 154 aa5.63□□□□□ -1.51
UPF2-203ENST00000397053 ANKRD29Q8N6D5 301 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 CITED1Q99966 193 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 IGHV4OR15-8A0A075B7B6 117 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms