RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 LGALS9BQ3B8N2 356 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 ZC2HC1BQ5TFG8 222 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 LGALS9CQ6DKI2 356 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 MRAP2Q96G30 205 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 ATP6V0BQ99437 205 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 TNFRSF18Q9Y5U5 241 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 IGHV7-4-1A0A0J9YVY3 117 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 PRAC2D3DTV9 90 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 J3QLI3 93 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 GTSCR1Q86UQ5 136 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 VCX2Q9H322 139 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 TLN2Q9Y4G6 2542 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 WNK1Q9H4A3 2382 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 TRGV11A0A075B6L2 103 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 H3BUT2 72 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 LGALS3P17931 250 aaKnown RBP5.08□□□□□ -1.6
BDNF-203ENST00000395978 FRYLO94915 3013 aa5.08□□□□□ -1.6
BDNF-203ENST00000395978 ANXA2RQ3ZCQ2 193 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 LINC01587Q99440 93 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 CSTL1Q9H114 145 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 PRORYQ9H606 182 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 MSRB1Q9NZV6 116 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 LINC01548A6NM66 108 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 C19orf84I3L1E1 186 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 VCYO14598 125 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 PSMB2P49721 201 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 FOXE3Q13461 319 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 CD5LO43866 347 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 COX8AP10176 69 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 PLNP26678 52 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 SUMO2P61956 95 aaKnown RBP5.07□□□□□ -1.6
BDNF-203ENST00000395978 BCL6BQ8N143 479 aaPredicted RBP5.07□□□□□ -1.6
BDNF-203ENST00000395978 Q8N6K4 173 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 BEX4Q9NWD9 120 aaPredicted RBP5.07□□□□□ -1.6
BDNF-203ENST00000395978 COX11Q9Y6N1 276 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 ZFHX4Q86UP3 3567 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 SORL1Q92673 2214 aa5.07□□□□□ -1.6
BDNF-203ENST00000395978 IGHV4-59P01825 116 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 CTRLP40313 264 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 UBE2V1Q13404 147 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 DEFB112Q30KQ8 113 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 COL27A1Q8IZC6 1860 aaPredicted RBP5.06□□□□□ -1.6
BDNF-203ENST00000395978 C2CD3Q4AC94 2353 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 TRAV26-2A0A0B4J265 109 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 LOC107984156A0A0G2JMH3 177 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 C2orf70A6NJV1 201 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 IGHG2P01859 326 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 SMAGPQ0VAQ4 97 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 AMMECR1LQ6DCA0 310 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 ARL17AQ8IVW1 177 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 CCDC140Q96MF4 163 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 NHP2Q9NX24 153 aaKnown RBP5.06□□□□□ -1.6
BDNF-203ENST00000395978 SPCS1Q9Y6A9 102 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 F6UB75 175 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 IGLV2-11P01706 119 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 PRSS2P07478 247 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 SONP18583 2426 aaKnown RBP5.06□□□□□ -1.6
BDNF-203ENST00000395978 A0A087WWL8 130 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 A0A1W2PRX2 142 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 LINC01545Q5VT33 79 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 ZNF493Q6ZR52 646 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 C9orf47Q6ZRZ4 202 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 AJUBAQ96IF1 538 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 JMJD8Q96S16 334 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 SMIM2Q9BVW6 85 aa5.06□□□□□ -1.6
BDNF-203ENST00000395978 TET2Q6N021 2002 aaPredicted RBP5.05□□□□□ -1.6
BDNF-203ENST00000395978 ELANEP08246 267 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 GATA1P15976 413 aaPredicted RBP5.05□□□□□ -1.6
BDNF-203ENST00000395978 ZNF80P51504 273 aaPredicted RBP5.05□□□□□ -1.6
BDNF-203ENST00000395978 RRN3P1Q2M238 152 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 C11orf44Q8N8P7 122 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 GEMIN7Q9H840 131 aaKnown RBP5.05□□□□□ -1.6
BDNF-203ENST00000395978 YAE1D1Q9NRH1 226 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 LRRK2Q5S007 2527 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 CRIP1P50238 77 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 SRSF2Q01130 221 aaKnown RBP5.05□□□□□ -1.6
BDNF-203ENST00000395978 CD300EQ496F6 205 aaPredicted RBP5.05□□□□□ -1.6
BDNF-203ENST00000395978 C2orf66Q6UXQ4 117 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 Q6ZVH6 145 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 ZFYVE26Q68DK2 2539 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 ZNF815PA8K554 130 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 DEFB131AP59861 70 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 SPINK13Q1W4C9 94 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 MRGPRG-AS1Q2M3A8 158 aa5.05□□□□□ -1.6
BDNF-203ENST00000395978 VWC2LB2RUY7 222 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 LINC00310P59036 64 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 ZNF876PQ49A33 203 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 STHQ8IWL8 128 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 ZNF418Q8TF45 676 aaPredicted RBP5.04□□□□□ -1.6
BDNF-203ENST00000395978 DEFB104AQ8WTQ1 72 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 C20orf78Q9BR46 151 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 MEGF9Q9H1U4 602 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 A6NDX4 124 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 SIVA1O15304 175 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 GNRH2O43555 120 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 GAGE1Q13065 139 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 TCTEX1D4Q5JR98 221 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 UNQ9165/PRO28630Q6UXU0 137 aa5.04□□□□□ -1.6
BDNF-203ENST00000395978 NRGNQ92686 78 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms