RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 C5orf51A6NDU8 294 aa4.16□□□□□ -1.74
SMARCAD1-203ENST00000394961 IGKV2D-40P01614 121 aaPredicted RBP4.16□□□□□ -1.74
SMARCAD1-203ENST00000394961 OR5C1Q8NGR4 320 aa4.16□□□□□ -1.74
SMARCAD1-203ENST00000394961 NUDT15Q9NV35 164 aa4.16□□□□□ -1.74
SMARCAD1-203ENST00000394961 A0A087WWC5 75 aa4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 H0YIZ8 118 aa4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 TYMSP04818 313 aa4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 OR10J4P0C629 311 aa4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 FAM159AQ6UWV7 190 aa4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 MRPL16Q9NX20 251 aaKnown RBP4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 FAM229AH3BQW9 127 aa4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 CCSO14618 274 aa4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 TAAR5O14804 337 aa4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 MGST1P10620 155 aaKnown RBP4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 LINC00479Q96M42 142 aa4.15□□□□□ -1.74
SMARCAD1-203ENST00000394961 TRAV8-6A0A0B4J262 113 aa4.15□□□□□ -1.75
SMARCAD1-203ENST00000394961 TRGV4A0A0C4DH28 118 aa4.15□□□□□ -1.75
SMARCAD1-203ENST00000394961 ACOT6Q3I5F7 207 aaPredicted RBP4.15□□□□□ -1.75
SMARCAD1-203ENST00000394961 ZNF479Q96JC4 524 aa4.15□□□□□ -1.75
SMARCAD1-203ENST00000394961 C8orf49Q96NF6 230 aa4.15□□□□□ -1.75
SMARCAD1-203ENST00000394961 UPK1BO75841 260 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 PLA2G1BP04054 148 aaKnown RBP4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 CRYGDP07320 174 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 STAG3L2P0CL84 134 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 STAG3L3P0CL85 134 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 GYPEP15421 78 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 FGF8P55075 233 aaPredicted RBP4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 PKIAP61925 76 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 CFAP126Q5VTH2 177 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 WFDC10BQ8IUB3 73 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 OR10G8Q8NGN5 311 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 PRADC1Q9BSG0 188 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 GTSF1LQ9H1H1 148 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 MDFICQ9P1T7 246 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 IGLV2-11P01706 119 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 MBP02144 154 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 SERF2P84101 59 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 C5orf17Q8NAS9 161 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 OR5AC2Q9NZP5 309 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 TRAV8-3A0A0A6YYJ7 113 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 RNF222A6NCQ9 220 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 A8MWV9 139 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 NHLH2Q02577 135 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 OR4C5Q8NGB2 326 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 BLNKQ8WV28 456 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 RMI2Q96E14 147 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 TVP23CQ96ET8 276 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 NKX6-2Q9C056 277 aaPredicted RBP4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 PARLQ9H300 379 aa4.14□□□□□ -1.75
SMARCAD1-203ENST00000394961 IGHV3-38A0A0C4DH36 116 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 RHODO00212 210 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 IGLV2-8P01709 118 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 UBE2L3P68036 154 aaKnown RBP4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 SAPCD1Q5SSQ6 148 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 Q6ZSN1 163 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 FAM240BA0A1B0GVZ2 78 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 A0A1W2PRE2 83 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 MPC2O95563 127 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 FHITP49789 147 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 GCSAMLQ5JQS6 135 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 AQP10Q96PS8 301 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 TRBV10-1A0A0K0K1A3 114 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 H3BTX0 84 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 S100A10P60903 97 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 FFAR4Q5NUL3 377 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 OR10G7Q8NGN6 311 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 NDFIP1Q9BT67 221 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 MED28Q9H204 178 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 TMEM167BQ9NRX6 74 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 IL36BQ9NZH7 164 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 MBD2Q9UBB5 411 aa4.13□□□□□ -1.75
SMARCAD1-203ENST00000394961 IGLV5-52A0A0A0MRZ9 124 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 HTN1P15515 57 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 TRAV6A0A075B6T7 132 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 TCRAP04437 139 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 RNASE3P12724 160 aaKnown RBP4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 H2BFSP57053 126 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 TMEM183BQ1AE95 376 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 SERTAD4-AS1Q5TG53 156 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 FAM122CQ6P4D5 195 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 TMEM183AQ8IXX5 376 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 DEFB104AQ8WTQ1 72 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 K7EQM0 130 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 ELOBQ15370 118 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 SLC25A29Q8N8R3 303 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 SCGB1C1Q8TD33 95 aa4.12□□□□□ -1.75
SMARCAD1-203ENST00000394961 TRAV8-1A0A0A6YYK1 113 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 RPL12P30050 165 aaKnown RBP4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 C14orf177Q52M58 125 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 TMEM97Q5BJF2 176 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 Q8N976 141 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 TNFSF18Q9UNG2 199 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 CYB561D1Q8N8Q1 229 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 ATP6V0E2Q8NHE4 81 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 Q8TAT8 98 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 CMTM2Q8TAZ6 248 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 PPP1R1CQ8WVI7 109 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 PGPA6NDG6 321 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 FAM25EA8MYX2 175 aa4.11□□□□□ -1.75
SMARCAD1-203ENST00000394961 OR7C2O60412 319 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms