RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 RAI1Q7Z5J4 1906 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-209ENST00000394804 BUB3O43684 328 aa9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 SUMO2P61956 95 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 LY6G5BQ8NDX9 201 aa9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 LY6LH3BQJ8 138 aa9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 BRD3OSQ6XYD6 125 aa9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 Q8N9W7 124 aa9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 CCL19Q99731 98 aa9.07□□□□□ -0.96
UBE2D3-209ENST00000394804 ITPR1Q14643 2758 aa9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 CD300EQ496F6 205 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 GAGE13Q4V321 117 aa9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 ZNF256Q9Y2P7 627 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 ARHGAP32A7KAX9 2087 aa9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 DGAT2L7PQ6IED9 249 aa9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 USMG5Q96IX5 58 aa9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 PRAC2D3DTV9 90 aa9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 CSTL1Q9H114 145 aa9.06□□□□□ -0.96
UBE2D3-209ENST00000394804 F8VRH5 84 aa9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 SRD5A1P18405 259 aa9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 ZNF80P51504 273 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 SPG11Q96JI7 2443 aa9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 H7C2G1 150 aa9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 FOXE3Q13461 319 aa9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 FBXL19-AS1Q494R0 122 aa9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 C2orf66Q6UXQ4 117 aa9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 ODF3BA8MYP8 253 aa9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 ZNF418Q8TF45 676 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-209ENST00000394804 A0A087WX48 190 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 H3BUX3 64 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 IGLC6P0CF74 106 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 SRSF2Q01130 221 aaKnown RBP9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 SFTA2Q6UW10 78 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 ADAMTSL5Q6ZMM2 481 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 CEND1Q8N111 149 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 RHPN1-AS1Q9BWJ2 59 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 KALRNO60229 2985 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 LENEPQ9Y5L5 61 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 TRBV25-1A0A075B6N4 114 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 FCN3O75636 299 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 SIGMAR1Q99720 223 aa9.04□□□□□ -0.96
UBE2D3-209ENST00000394804 K7ERJ3 54 aa9.03□□□□□ -0.96
UBE2D3-209ENST00000394804 TAL2Q16559 108 aa9.03□□□□□ -0.96
UBE2D3-209ENST00000394804 DSCAML1Q8TD84 2053 aa9.03□□□□□ -0.96
UBE2D3-209ENST00000394804 ODF1Q14990 250 aa9.03□□□□□ -0.96
UBE2D3-209ENST00000394804 CENPVL3A0A0U1RRI6 287 aa9.03□□□□□ -0.96
UBE2D3-209ENST00000394804 NDUFA4O00483 81 aa9.03□□□□□ -0.96
UBE2D3-209ENST00000394804 PRSS2P07478 247 aa9.03□□□□□ -0.96
UBE2D3-209ENST00000394804 ANXA2RQ3ZCQ2 193 aa9.03□□□□□ -0.96
UBE2D3-209ENST00000394804 WFDC12Q8WWY7 111 aa9.03□□□□□ -0.96
UBE2D3-209ENST00000394804 VCYO14598 125 aa9.02□□□□□ -0.96
UBE2D3-209ENST00000394804 HLA-DRB4P13762 266 aa9.02□□□□□ -0.96
UBE2D3-209ENST00000394804 HIGD1BQ9P298 99 aa9.02□□□□□ -0.96
UBE2D3-209ENST00000394804 U3KQK5 164 aa9.02□□□□□ -0.96
UBE2D3-209ENST00000394804 HLA-DRB4X5D2U9 266 aa9.02□□□□□ -0.96
UBE2D3-209ENST00000394804 C20orf78Q9BR46 151 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 TTTY13Q9BZ97 58 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 PRORYQ9H606 182 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 MRGPRG-AS1Q2M3A8 158 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 DAZ1Q9NQZ3 744 aaKnown RBP9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 IGHV1-69DA0A0B4J2H0 117 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 MYMXA0A1B0GTQ4 84 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 OVOL3O00110 214 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 IGHV1-69P01742 117 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 GATD1Q8NB37 220 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 PGPEP1Q9NXJ5 209 aa9.02□□□□□ -0.97
UBE2D3-209ENST00000394804 SPENQ96T58 3664 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 FXYD2P54710 66 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 NOTCH3Q9UM47 2321 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 TRAV12-3A0A0B4J271 114 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 SAP30O75446 220 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 ZFP36P26651 326 aaKnown RBP9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 RBX1P62877 108 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 C2orf91Q6ZV80 131 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 DYNLRB2Q8TF09 96 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 ZNF688P0C7X2 276 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 DEFB104AQ8WTQ1 72 aa9.01□□□□□ -0.97
UBE2D3-209ENST00000394804 A0A1B0GV72 72 aa9□□□□□ -0.97
UBE2D3-209ENST00000394804 IGSF10Q6WRI0 2623 aa9□□□□□ -0.97
UBE2D3-209ENST00000394804 ADORA2A-AS1P86434 159 aa9□□□□□ -0.97
UBE2D3-209ENST00000394804 DLX4Q92988 240 aaPredicted RBP9□□□□□ -0.97
UBE2D3-209ENST00000394804 PRADC1Q9BSG0 188 aa9□□□□□ -0.97
UBE2D3-209ENST00000394804 VCX2Q9H322 139 aa9□□□□□ -0.97
UBE2D3-209ENST00000394804 DUSP14O95147 198 aaKnown RBP9□□□□□ -0.97
UBE2D3-209ENST00000394804 PRB1P04280 392 aa9□□□□□ -0.97
UBE2D3-209ENST00000394804 COX6CP09669 75 aa9□□□□□ -0.97
UBE2D3-209ENST00000394804 C9orf47Q6ZRZ4 202 aa9□□□□□ -0.97
UBE2D3-209ENST00000394804 Q71RC1 249 aaPredicted RBP9□□□□□ -0.97
UBE2D3-209ENST00000394804 A0A087WWL8 130 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 MRPS12O15235 138 aaKnown RBP8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 SLC25A16P16260 332 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 EMP1P54849 157 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 SIRPDQ9H106 197 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 GTSF1LQ9H1H1 148 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 TP53TG1Q9Y2A0 90 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 CHD6Q8TD26 2715 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms