RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 LAGE3Q14657 143 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 C15orf32Q32M92 178 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 CCDC144NLQ6NUI1 221 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 MAPKAPK5-AS1Q8N8E1 139 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 PRADC1Q9BSG0 188 aa6.93□□□□□ -1.3
RTN4-206ENST00000394611 PF4V1P10720 104 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 TRGV9Q99603 122 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 ZNF492Q9P255 531 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 G3V318 75 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 CD3EP07766 207 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 ZNF80P51504 273 aaPredicted RBP6.92□□□□□ -1.3
RTN4-206ENST00000394611 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 LGALS9BQ3B8N2 356 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 GAGE2EQ4V326 116 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 LGALS9CQ6DKI2 356 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 RNF183Q96D59 192 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 RPL39LQ96EH5 51 aaKnown RBP6.92□□□□□ -1.3
RTN4-206ENST00000394611 GAGE2DQ9UEU5 116 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 IGKV1-17P01599 117 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 EIF4EBP1Q13541 118 aaPredicted RBP6.92□□□□□ -1.3
RTN4-206ENST00000394611 DYNAPQ8N1N2 210 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 DLX4Q92988 240 aaPredicted RBP6.92□□□□□ -1.3
RTN4-206ENST00000394611 PRR25Q96S07 402 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 CTSZQ9UBR2 303 aa6.92□□□□□ -1.3
RTN4-206ENST00000394611 BOD1L2Q8IYS8 172 aa6.91□□□□□ -1.3
RTN4-206ENST00000394611 NXT2Q9NPJ8 142 aaKnown RBP6.91□□□□□ -1.3
RTN4-206ENST00000394611 ZFAND6Q6FIF0 208 aa6.91□□□□□ -1.3
RTN4-206ENST00000394611 RELNP78509 3460 aa6.91□□□□□ -1.3
RTN4-206ENST00000394611 NBR2O15453 112 aa6.9□□□□□ -1.3
RTN4-206ENST00000394611 CRIP1P50238 77 aa6.9□□□□□ -1.3
RTN4-206ENST00000394611 DGAT2L7PQ6IED9 249 aa6.9□□□□□ -1.3
RTN4-206ENST00000394611 CFHR4Q92496 578 aa6.9□□□□□ -1.3
RTN4-206ENST00000394611 H7C1H1 209 aa6.9□□□□□ -1.3
RTN4-206ENST00000394611 BBC3Q96PG8 261 aaPredicted RBP6.9□□□□□ -1.3
RTN4-206ENST00000394611 SHANK2-AS3Q9BTD1 123 aa6.9□□□□□ -1.3
RTN4-206ENST00000394611 IGLV3-9A0A075B6K5 115 aa6.9□□□□□ -1.31
RTN4-206ENST00000394611 SRSF1Q07955 248 aaKnown RBP eCLIP6.9□□□□□ -1.314e-8■■□□□ 12.3
RTN4-206ENST00000394611 ZNF491Q8N8L2 437 aa6.9□□□□□ -1.31
RTN4-206ENST00000394611 METTL26Q96S19 204 aa6.9□□□□□ -1.31
RTN4-206ENST00000394611 PRRC2AP48634 2157 aaKnown RBP6.9□□□□□ -1.31
RTN4-206ENST00000394611 LRRK2Q5S007 2527 aa6.9□□□□□ -1.31
RTN4-206ENST00000394611 PRB1P04280 392 aa6.9□□□□□ -1.31
RTN4-206ENST00000394611 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.31
RTN4-206ENST00000394611 Q6AWC8 147 aa6.9□□□□□ -1.31
RTN4-206ENST00000394611 ZNF562Q6V9R5 426 aa6.9□□□□□ -1.31
RTN4-206ENST00000394611 RNASE6Q93091 150 aaKnown RBP6.9□□□□□ -1.31
RTN4-206ENST00000394611 DPM3Q9P2X0 92 aa6.9□□□□□ -1.31
RTN4-206ENST00000394611 ZNF462Q96JM2 2506 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 KNCNA6PVL3 124 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 TMEM178BH3BS89 294 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 CD7P09564 240 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 SIGLEC15Q6ZMC9 328 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 MRAP2Q96G30 205 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 SPXQ9BT56 116 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.89□□□□□ -1.31
RTN4-206ENST00000394611 C19orf71A6NCJ1 209 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 LOXP28300 417 aaPredicted RBP6.89□□□□□ -1.31
RTN4-206ENST00000394611 APOBEC3AP31941 199 aaPredicted RBP6.89□□□□□ -1.31
RTN4-206ENST00000394611 C2orf66Q6UXQ4 117 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 FOXI2Q6ZQN5 318 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 TRPT1Q86TN4 253 aaKnown RBP6.89□□□□□ -1.31
RTN4-206ENST00000394611 OR10J6PQ8NGY7 276 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 NTN5Q8WTR8 489 aaPredicted RBP6.89□□□□□ -1.31
RTN4-206ENST00000394611 TRAV8-3A0A0A6YYJ7 113 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 GATA3P23771 443 aa6.89□□□□□ -1.31
RTN4-206ENST00000394611 CFAP46Q8IYW2 2715 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 ODF1Q14990 250 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 MRPL23Q16540 153 aaKnown RBP6.88□□□□□ -1.31
RTN4-206ENST00000394611 OPRPNQ99935 248 aaPredicted RBP6.88□□□□□ -1.31
RTN4-206ENST00000394611 KMT2BQ9UMN6 2715 aaPredicted RBP6.88□□□□□ -1.31
RTN4-206ENST00000394611 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
RTN4-206ENST00000394611 ZNF833PQ6ZTB9 187 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 DUX5Q96PT3 197 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 GFRA4Q9GZZ7 299 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 PLSCR4Q9NRQ2 329 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 BUB1B-PAK6H3BSN5 160 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 CCL21O00585 134 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 IGHG3P01860 377 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
RTN4-206ENST00000394611 RRN3P1Q2M238 152 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 TP53TG1Q9Y2A0 90 aa6.88□□□□□ -1.31
RTN4-206ENST00000394611 BRD3OSQ6XYD6 125 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 C8orf86Q6ZUL3 223 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 DAND5Q8N907 189 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 MLST8Q9BVC4 326 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 F8W1H4 67 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 IGF1P05019 195 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 ATP5IP56385 69 aaPredicted RBP6.87□□□□□ -1.31
RTN4-206ENST00000394611 TRAV12-2A0A075B6T6 113 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 A0A1B0GW15 77 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 GNRH2O43555 120 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 CT83Q5H943 113 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 FAM159AQ6UWV7 190 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 PLEKHB2Q96CS7 222 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 JPT2Q9H910 190 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 SPANXB1Q9NS25 103 aaPredicted RBP6.87□□□□□ -1.31
RTN4-206ENST00000394611 SVEP1Q4LDE5 3571 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 ASIPP42127 132 aa6.87□□□□□ -1.31
RTN4-206ENST00000394611 PRSS22Q9GZN4 317 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms