RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
PPARGC1B-203ENST00000394320 CD5LO43866 347 aa11.27□□□□□ -0.6
PPARGC1B-203ENST00000394320 LOXL1Q08397 574 aaPredicted RBP11.27□□□□□ -0.6
PPARGC1B-203ENST00000394320 NCKAP5O14513 1909 aa11.27□□□□□ -0.61
PPARGC1B-203ENST00000394320 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
PPARGC1B-203ENST00000394320 DENND4AQ7Z401 1863 aa11.27□□□□□ -0.61
PPARGC1B-203ENST00000394320 C10orf142B7Z368 130 aa11.27□□□□□ -0.61
PPARGC1B-203ENST00000394320 BLCAPP62952 87 aa11.27□□□□□ -0.61
PPARGC1B-203ENST00000394320 SIGLEC8Q9NYZ4 499 aa11.27□□□□□ -0.61
PPARGC1B-203ENST00000394320 BUB3O43684 328 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 MSMPQ1L6U9 139 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 C11orf68Q9H3H3 251 aaKnown RBP11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 NOTCH2Q04721 2471 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 EML6Q6ZMW3 1958 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 IGHV3-16A0A0C4DH30 117 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 GPHB5Q86YW7 130 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 GATD1Q8NB37 220 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 PIEZO1Q92508 2521 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 ZFP36P26651 326 aaKnown RBP11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 Q71RC1 249 aaPredicted RBP11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 ODF3L1Q8IXM7 274 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 DNAJC30Q96LL9 226 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 FREM1Q5H8C1 2179 aa11.26□□□□□ -0.61
PPARGC1B-203ENST00000394320 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 ZMAT4Q9H898 229 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 A0A087X0K7 114 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 WI2-2373I1.2A0A1W2PRP0 233 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 F8VRH5 84 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 NPYP01303 97 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 C17orf77Q96MU5 243 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 CFHR3Q02985 330 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 IGHV1-24A0A0C4DH33 117 aa11.25□□□□□ -0.61
PPARGC1B-203ENST00000394320 KIAA1549LQ6ZVL6 1849 aa11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 MYCNOSP40205 109 aa11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 DEFB104AQ8WTQ1 72 aa11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 HERVK_113P63121 156 aa11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 ZNF664Q8N3J9 261 aa11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 NCOA6Q14686 2063 aaPredicted RBP11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 TRAV8-4A0A0B4J246 113 aa11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 TNFRSF13BO14836 293 aaPredicted RBP11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 CGB3P0DN86 165 aa11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 CGB7P0DN87 165 aa11.24□□□□□ -0.61
PPARGC1B-203ENST00000394320 A0A1B0GV72 72 aa11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 K7EN84 100 aa11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 KIR3DS1Q14943 382 aa11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 PATE2Q6UY27 113 aa11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 TMEM95Q3KNT9 176 aa11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 F8WEM9 126 aa11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 KLF5Q13887 457 aaPredicted RBP11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 SH2D6Q7Z4S9 175 aa11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 RITA1Q96K30 269 aa11.23□□□□□ -0.61
PPARGC1B-203ENST00000394320 STPG4Q8N801 248 aa11.22□□□□□ -0.61
PPARGC1B-203ENST00000394320 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
PPARGC1B-203ENST00000394320 A6NDX4 124 aa11.22□□□□□ -0.61
PPARGC1B-203ENST00000394320 BOD1L2Q8IYS8 172 aa11.22□□□□□ -0.61
PPARGC1B-203ENST00000394320 F6UB75 175 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 WISP2O76076 250 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 IGLV2-14P01704 120 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 SLURP1P55000 103 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 C16orf74Q96GX8 76 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 U3KQE9 123 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 NPC2P61916 151 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 LMO4P61968 165 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 KLF12Q9Y4X4 402 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 TRAV26-2A0A0B4J265 109 aa11.21□□□□□ -0.61
PPARGC1B-203ENST00000394320 HIVEP2P31629 2446 aa11.21□□□□□ -0.62
PPARGC1B-203ENST00000394320 TRBV6-1A0A0K0K1D8 114 aa11.21□□□□□ -0.62
PPARGC1B-203ENST00000394320 GAGE6Q13070 117 aa11.21□□□□□ -0.62
PPARGC1B-203ENST00000394320 CFHR4Q92496 578 aa11.21□□□□□ -0.62
PPARGC1B-203ENST00000394320 POLR3KQ9Y2Y1 108 aaPredicted RBP11.21□□□□□ -0.62
PPARGC1B-203ENST00000394320 TAL2Q16559 108 aa11.2□□□□□ -0.62
PPARGC1B-203ENST00000394320 FAM167A-AS1Q96KT0 104 aa11.2□□□□□ -0.62
PPARGC1B-203ENST00000394320 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
PPARGC1B-203ENST00000394320 C2orf82Q6UX34 121 aa11.2□□□□□ -0.62
PPARGC1B-203ENST00000394320 ODF3BA8MYP8 253 aa11.2□□□□□ -0.62
PPARGC1B-203ENST00000394320 MED14OSP0DP75 135 aa11.2□□□□□ -0.62
PPARGC1B-203ENST00000394320 CLPSL1A2RUU4 121 aa11.2□□□□□ -0.62
PPARGC1B-203ENST00000394320 C2orf70A6NJV1 201 aa11.2□□□□□ -0.62
PPARGC1B-203ENST00000394320 C9orf47Q6ZRZ4 202 aa11.2□□□□□ -0.62
PPARGC1B-203ENST00000394320 SPANXA1Q9NS26 97 aa11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 LAMTOR3Q9UHA4 124 aa11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 GNRH2O43555 120 aa11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 C4orf3Q8WVX3 66 aa11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 IGF2BP2-AS1Q96M15 143 aa11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 TRBV20-1A0A075B6N2 111 aa11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 MUC22E2RYF6 1773 aaPredicted RBP11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 P0C879 139 aa11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 COX8AP10176 69 aa11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 MRPL35Q9NZE8 188 aaKnown RBP11.19□□□□□ -0.62
PPARGC1B-203ENST00000394320 INSL3P51460 131 aa11.18□□□□□ -0.62
PPARGC1B-203ENST00000394320 NOP10Q9NPE3 64 aaKnown RBP11.18□□□□□ -0.62
PPARGC1B-203ENST00000394320 PCDH15Q96QU1 1955 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms