RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 DEFB4AO15263 64 aa2.54□□□□□ -2
PHF3-202ENST00000393387 SLC22A18ASQ8N1D0 253 aa2.54□□□□□ -2
PHF3-202ENST00000393387 MRPL36Q9P0J6 103 aaKnown RBP2.54□□□□□ -2
PHF3-202ENST00000393387 ZNF638Q14966 1978 aaKnown RBP2.54□□□□□ -2
PHF3-202ENST00000393387 SHROOM3Q8TF72 1996 aa2.54□□□□□ -2
PHF3-202ENST00000393387 IGHV1-46P01743 117 aa2.54□□□□□ -2
PHF3-202ENST00000393387 C4orf48Q5BLP8 95 aa2.54□□□□□ -2
PHF3-202ENST00000393387 PATE2Q6UY27 113 aa2.54□□□□□ -2
PHF3-202ENST00000393387 TNRC6AQ8NDV7 1962 aaKnown RBP2.54□□□□□ -2
PHF3-202ENST00000393387 FGF23Q9GZV9 251 aaPredicted RBP2.54□□□□□ -2
PHF3-202ENST00000393387 PRYO14603 147 aa2.53□□□□□ -2
PHF3-202ENST00000393387 Q6ZVQ6 151 aa2.53□□□□□ -2
PHF3-202ENST00000393387 IGLV8-61A0A075B6I0 122 aa2.53□□□□□ -2
PHF3-202ENST00000393387 CCKP06307 115 aa2.53□□□□□ -2
PHF3-202ENST00000393387 SAA4P35542 130 aa2.53□□□□□ -2
PHF3-202ENST00000393387 CFAP126Q5VTH2 177 aa2.53□□□□□ -2
PHF3-202ENST00000393387 Q6ZT83 130 aa2.53□□□□□ -2
PHF3-202ENST00000393387 FAM19A1Q7Z5A9 133 aa2.53□□□□□ -2
PHF3-202ENST00000393387 DEFB123Q8N688 67 aa2.53□□□□□ -2
PHF3-202ENST00000393387 MAPKAPK5-AS1Q8N8E1 139 aa2.53□□□□□ -2
PHF3-202ENST00000393387 C9orf106Q8NAJ2 232 aa2.53□□□□□ -2
PHF3-202ENST00000393387 TOMM6Q96B49 74 aa2.53□□□□□ -2
PHF3-202ENST00000393387 MDFICQ9P1T7 246 aa2.53□□□□□ -2
PHF3-202ENST00000393387 TRBV10-1A0A0K0K1A3 114 aa2.53□□□□□ -2
PHF3-202ENST00000393387 J3QRE1 110 aa2.53□□□□□ -2
PHF3-202ENST00000393387 NDUFC1O43677 76 aa2.53□□□□□ -2
PHF3-202ENST00000393387 GYPEP15421 78 aa2.53□□□□□ -2
PHF3-202ENST00000393387 DEFB1P60022 68 aa2.53□□□□□ -2
PHF3-202ENST00000393387 PRLHP81277 87 aa2.53□□□□□ -2
PHF3-202ENST00000393387 LINC00208Q96KT6 92 aa2.53□□□□□ -2
PHF3-202ENST00000393387 A0A0J9YXY3 114 aa2.53□□□□□ -2
PHF3-202ENST00000393387 E9PLD3 99 aa2.53□□□□□ -2
PHF3-202ENST00000393387 E9PLN8 166 aa2.53□□□□□ -2
PHF3-202ENST00000393387 K7EQD1 137 aa2.53□□□□□ -2
PHF3-202ENST00000393387 MIAQ16674 131 aa2.53□□□□□ -2
PHF3-202ENST00000393387 FAM110DQ8TAY7 271 aaPredicted RBP2.53□□□□□ -2
PHF3-202ENST00000393387 SSC5DA1L4H1 1573 aa2.53□□□□□ -2
PHF3-202ENST00000393387 GPHB5Q86YW7 130 aa2.53□□□□□ -2.01
PHF3-202ENST00000393387 GTSF1Q8WW33 167 aa2.53□□□□□ -2.01
PHF3-202ENST00000393387 BPESC1Q9GZL8 116 aa2.53□□□□□ -2.01
PHF3-202ENST00000393387 FAM223BA6NKX1 122 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 IGKV1-17P01599 117 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 HILS1P60008 231 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 H3BS24 57 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 SSBP3-AS1Q7Z2R9 100 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 PRORYQ9H606 182 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 ZFC3H1O60293 1989 aaKnown RBP2.52□□□□□ -2.01
PHF3-202ENST00000393387 WISP3O95389 354 aaPredicted RBP2.52□□□□□ -2.01
PHF3-202ENST00000393387 MYCNOSP40205 109 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 PDE6HQ13956 83 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 B9D2Q9BPU9 175 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 ESRGQ1W209 222 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 LINC01561Q8N1V8 128 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 C5orf56Q8N8D9 126 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 TRBV7-7A0A0K0K1E9 115 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 PINLYPA6NC86 204 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 LINC01619G3V211 115 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 ZNF22P17026 224 aaPredicted RBP2.52□□□□□ -2.01
PHF3-202ENST00000393387 LINC00526Q96FQ7 95 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 IGLV9-49A0A0B4J1Y8 123 aa2.52□□□□□ -2.01
PHF3-202ENST00000393387 F8W735 103 aaPredicted RBP2.52□□□□□ -2.01
PHF3-202ENST00000393387 DDX60Q8IY21 1712 aaKnown RBP2.51□□□□□ -2.01
PHF3-202ENST00000393387 ITGBL1O95965 494 aaPredicted RBP2.51□□□□□ -2.01
PHF3-202ENST00000393387 APOC4P55056 127 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 REG3AQ06141 175 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 Q8N9W7 124 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 PARP4Q9UKK3 1724 aaKnown RBP2.51□□□□□ -2.01
PHF3-202ENST00000393387 COL14A1Q05707 1796 aaKnown RBP2.51□□□□□ -2.01
PHF3-202ENST00000393387 IGKV2-28A0A075B6P5 120 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 NDUFA1O15239 70 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 IGKV2D-28P01615 120 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 ATP5EP2Q5VTU8 51 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 OTOFQ9HC10 1997 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 IGKV1D-17A0A075B6S4 117 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 C2orf70A6NJV1 201 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 WIPF1O43516 503 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 RNF138Q8WVD3 245 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 PYGO1Q9Y3Y4 419 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 TRPM3Q9HCF6 1732 aaPredicted RBP2.51□□□□□ -2.01
PHF3-202ENST00000393387 LRP6O75581 1613 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 H7C423 109 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 COL8A2P25067 703 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 QRFPP83859 136 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 PIFOQ8TCI5 191 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 USP54Q70EL1 1684 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 TRBV7-3A0A075B6L6 115 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 Q6ZSV7 163 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 YPEL4Q96NS1 127 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 IMUPQ9GZP8 106 aa2.51□□□□□ -2.01
PHF3-202ENST00000393387 PRAC2D3DTV9 90 aa2.5□□□□□ -2.01
PHF3-202ENST00000393387 MRPS36P82909 103 aaKnown RBP2.5□□□□□ -2.01
PHF3-202ENST00000393387 CSRP2Q16527 193 aa2.5□□□□□ -2.01
PHF3-202ENST00000393387 Q8N6K4 173 aa2.5□□□□□ -2.01
PHF3-202ENST00000393387 LINC01465Q8N7H1 131 aa2.5□□□□□ -2.01
PHF3-202ENST00000393387 SPRR3Q9UBC9 169 aa2.5□□□□□ -2.01
PHF3-202ENST00000393387 TIAM2Q8IVF5 1701 aa2.5□□□□□ -2.01
PHF3-202ENST00000393387 ZNF672Q499Z4 452 aaPredicted RBP2.5□□□□□ -2.01
PHF3-202ENST00000393387 LINC00114Q6XXX2 140 aa2.5□□□□□ -2.01
PHF3-202ENST00000393387 NDUFA4L2Q9NRX3 87 aa2.5□□□□□ -2.01
PHF3-202ENST00000393387 COL16A1Q07092 1604 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms