RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 CHCHD5Q9BSY4 110 aa13.15□□□□□ -0.3
PTPA-207ENST00000393370 TEX36Q5VZQ5 186 aa13.15□□□□□ -0.3
PTPA-207ENST00000393370 SMIM2Q9BVW6 85 aa13.15□□□□□ -0.3
PTPA-207ENST00000393370 GLRXP35754 106 aa13.14□□□□□ -0.31
PTPA-207ENST00000393370 DLX1P56177 255 aa13.14□□□□□ -0.31
PTPA-207ENST00000393370 PRB3Q04118 309 aaPredicted RBP13.14□□□□□ -0.31
PTPA-207ENST00000393370 FAM57AQ8TBR7 257 aa13.14□□□□□ -0.31
PTPA-207ENST00000393370 C11orf21Q9P2W6 132 aa13.14□□□□□ -0.31
PTPA-207ENST00000393370 IGLV3-9A0A075B6K5 115 aa13.14□□□□□ -0.31
PTPA-207ENST00000393370 SPANXA1Q9NS26 97 aa13.14□□□□□ -0.31
PTPA-207ENST00000393370 LOC400499M0QZD8 3231 aa13.14□□□□□ -0.31
PTPA-207ENST00000393370 ELANEP08246 267 aa13.13□□□□□ -0.31
PTPA-207ENST00000393370 DYNAPQ8N1N2 210 aa13.13□□□□□ -0.31
PTPA-207ENST00000393370 PLCE1Q9P212 2302 aa13.13□□□□□ -0.31
PTPA-207ENST00000393370 PATE3B3GLJ2 98 aa13.13□□□□□ -0.31
PTPA-207ENST00000393370 H7C2G1 150 aa13.13□□□□□ -0.31
PTPA-207ENST00000393370 ATP5J2P56134 94 aa13.13□□□□□ -0.31
PTPA-207ENST00000393370 EIF4EBP3O60516 100 aaPredicted RBP13.12□□□□□ -0.31
PTPA-207ENST00000393370 EMP1P54849 157 aa13.12□□□□□ -0.31
PTPA-207ENST00000393370 CCL8P80075 99 aa13.12□□□□□ -0.31
PTPA-207ENST00000393370 LINC01587Q99440 93 aa13.12□□□□□ -0.31
PTPA-207ENST00000393370 CSMD1Q96PZ7 3565 aa13.12□□□□□ -0.31
PTPA-207ENST00000393370 ORMDL2Q53FV1 153 aa13.12□□□□□ -0.31
PTPA-207ENST00000393370 IGHV7-4-1A0A0J9YVY3 117 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 PRAC2D3DTV9 90 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 FOXC1Q12948 553 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 C2orf66Q6UXQ4 117 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 TMEM126AQ9H061 195 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 C21orf62Q9NYP8 219 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 SMAD5-AS1Q9Y6J3 95 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 TRAV2A0A0B4J234 112 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 TSPEAR-AS2P59090 65 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 GFRALQ6UXV0 394 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 SLC25A29Q8N8R3 303 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 C8orf31Q8N9H6 132 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 RAB1BQ9H0U4 201 aa13.11□□□□□ -0.31
PTPA-207ENST00000393370 PTPRZ1P23471 2315 aaPredicted RBP13.1□□□□□ -0.31
PTPA-207ENST00000393370 MALRD1Q5VYJ5 2156 aa13.1□□□□□ -0.31
PTPA-207ENST00000393370 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
PTPA-207ENST00000393370 DMXL2Q8TDJ6 3036 aa13.1□□□□□ -0.31
PTPA-207ENST00000393370 IGHV3-33P01772 117 aa13.1□□□□□ -0.31
PTPA-207ENST00000393370 LPAL2Q16609 132 aa13.1□□□□□ -0.31
PTPA-207ENST00000393370 ZFHX2Q9C0A1 2572 aaPredicted RBP13.09□□□□□ -0.31
PTPA-207ENST00000393370 TIMM23O14925 209 aa13.09□□□□□ -0.31
PTPA-207ENST00000393370 CRYGDP07320 174 aa13.09□□□□□ -0.31
PTPA-207ENST00000393370 RPL7P18124 248 aaKnown RBP13.09□□□□□ -0.31
PTPA-207ENST00000393370 RPL13AP40429 203 aaKnown RBP13.09□□□□□ -0.31
PTPA-207ENST00000393370 LYPD2Q6UXB3 125 aa13.09□□□□□ -0.31
PTPA-207ENST00000393370 PRSS33Q8NF86 280 aa13.09□□□□□ -0.31
PTPA-207ENST00000393370 A4D1N5 150 aa13.09□□□□□ -0.31
PTPA-207ENST00000393370 IGHV4-39P01824 125 aa13.09□□□□□ -0.31
PTPA-207ENST00000393370 LINC01620Q4KN68 170 aa13.09□□□□□ -0.31
PTPA-207ENST00000393370 SPANXN1Q5VSR9 72 aa13.09□□□□□ -0.31
PTPA-207ENST00000393370 MUC6Q6W4X9 2439 aa13.09□□□□□ -0.31
PTPA-207ENST00000393370 TIMD4Q96H15 378 aa13.08□□□□□ -0.32
PTPA-207ENST00000393370 LGALS9O00182 355 aa13.08□□□□□ -0.32
PTPA-207ENST00000393370 SUMO2P61956 95 aaKnown RBP13.08□□□□□ -0.32
PTPA-207ENST00000393370 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.32
PTPA-207ENST00000393370 TCF15Q12870 199 aa13.07□□□□□ -0.32
PTPA-207ENST00000393370 NRGNQ92686 78 aa13.07□□□□□ -0.32
PTPA-207ENST00000393370 RPL39LQ96EH5 51 aaKnown RBP13.07□□□□□ -0.32
PTPA-207ENST00000393370 IGLV4-69A0A075B6H9 119 aa13.07□□□□□ -0.32
PTPA-207ENST00000393370 IGHV3OR16-8A0A075B7F1 116 aa13.07□□□□□ -0.32
PTPA-207ENST00000393370 LINC00694P0DN24 101 aa13.07□□□□□ -0.32
PTPA-207ENST00000393370 IGHV1-8P0DP01 117 aa13.07□□□□□ -0.32
PTPA-207ENST00000393370 DLX6P56179 175 aa13.07□□□□□ -0.32
PTPA-207ENST00000393370 C14orf178Q8N769 122 aaPredicted RBP13.07□□□□□ -0.32
PTPA-207ENST00000393370 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
PTPA-207ENST00000393370 IGHV1-3A0A0C4DH29 117 aa13.06□□□□□ -0.32
PTPA-207ENST00000393370 H3BMM0 161 aa13.06□□□□□ -0.32
PTPA-207ENST00000393370 ATP1A1-AS1Q5TC04 95 aa13.06□□□□□ -0.32
PTPA-207ENST00000393370 RNF182Q8N6D2 247 aa13.06□□□□□ -0.32
PTPA-207ENST00000393370 TMEM263Q8WUH6 116 aaKnown RBP13.06□□□□□ -0.32
PTPA-207ENST00000393370 UBE2WQ96B02 151 aa13.06□□□□□ -0.32
PTPA-207ENST00000393370 J3KRW8 73 aa13.06□□□□□ -0.32
PTPA-207ENST00000393370 ZNF56Q15929 161 aa13.06□□□□□ -0.32
PTPA-207ENST00000393370 P0DMU3 169 aa13.05□□□□□ -0.32
PTPA-207ENST00000393370 FAM231AP0DMU4 169 aa13.05□□□□□ -0.32
PTPA-207ENST00000393370 FAM231CP0DMU5 169 aa13.05□□□□□ -0.32
PTPA-207ENST00000393370 ATXN8Q156A1 80 aa13.05□□□□□ -0.32
PTPA-207ENST00000393370 SPRY2O43597 315 aa13.05□□□□□ -0.32
PTPA-207ENST00000393370 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
PTPA-207ENST00000393370 IGHV3-23P01764 117 aa13.05□□□□□ -0.32
PTPA-207ENST00000393370 BEX4Q9NWD9 120 aaPredicted RBP13.05□□□□□ -0.32
PTPA-207ENST00000393370 LOC107984640A0A0U1RRK4 108 aa13.04□□□□□ -0.32
PTPA-207ENST00000393370 F8W735 103 aaPredicted RBP13.04□□□□□ -0.32
PTPA-207ENST00000393370 LOXP28300 417 aaPredicted RBP13.04□□□□□ -0.32
PTPA-207ENST00000393370 HERVK_113P61574 105 aa13.04□□□□□ -0.32
PTPA-207ENST00000393370 PMS2CLQ68D20 193 aa13.04□□□□□ -0.32
PTPA-207ENST00000393370 AMELXQ99217 191 aa13.04□□□□□ -0.32
PTPA-207ENST00000393370 NDUFB3O43676 98 aa13.04□□□□□ -0.32
PTPA-207ENST00000393370 SLC50A1Q9BRV3 221 aa13.04□□□□□ -0.32
PTPA-207ENST00000393370 TRBV10-2A0A0K0K1G8 114 aa13.04□□□□□ -0.32
PTPA-207ENST00000393370 TSHBP01222 138 aa13.03□□□□□ -0.32
PTPA-207ENST00000393370 CD59P13987 128 aa13.03□□□□□ -0.32
PTPA-207ENST00000393370 Q1RN00 199 aa13.03□□□□□ -0.32
PTPA-207ENST00000393370 RNF223E7ERA6 249 aa13.03□□□□□ -0.32
PTPA-207ENST00000393370 DEFB104AQ8WTQ1 72 aa13.03□□□□□ -0.32
PTPA-207ENST00000393370 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.32
PTPA-207ENST00000393370 DMXL1Q9Y485 3027 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms