RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 IGLC6P0CF74 106 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 FHL3Q13643 280 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 TM2D2Q9BX73 214 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 AGPAT4-IT1Q9H0P7 198 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 FAM90A27PA6NNH2 459 aa12.63□□□□□ -0.39
PHTF1-205ENST00000393357 SRD5A1P18405 259 aa12.63□□□□□ -0.39
PHTF1-205ENST00000393357 FOXI1Q12951 378 aa12.63□□□□□ -0.39
PHTF1-205ENST00000393357 TMEM30BQ3MIR4 351 aa12.63□□□□□ -0.39
PHTF1-205ENST00000393357 PRR30Q53SZ7 412 aaPredicted RBP12.63□□□□□ -0.39
PHTF1-205ENST00000393357 C8orf86Q6ZUL3 223 aa12.63□□□□□ -0.39
PHTF1-205ENST00000393357 IGHG4P01861 327 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 C3orf56Q8N813 242 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 Q8N8P6 123 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 IGHV3OR16-10A0A075B7F0 116 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 G3V318 75 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 C15orf32Q32M92 178 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 TMEM170BQ5T4T1 132 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 MYMXA0A1B0GTQ4 84 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 VSTM5A8MXK1 200 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 LYPD1Q8N2G4 141 aa12.62□□□□□ -0.39
PHTF1-205ENST00000393357 F5H697 171 aa12.61□□□□□ -0.39
PHTF1-205ENST00000393357 SMCPP49901 116 aaPredicted RBP12.61□□□□□ -0.39
PHTF1-205ENST00000393357 MORN3Q6PF18 240 aaPredicted RBP12.61□□□□□ -0.39
PHTF1-205ENST00000393357 ZNF575Q86XF7 245 aa12.61□□□□□ -0.39
PHTF1-205ENST00000393357 DEFB123Q8N688 67 aa12.61□□□□□ -0.39
PHTF1-205ENST00000393357 A0A087WX48 190 aa12.61□□□□□ -0.39
PHTF1-205ENST00000393357 B5MCH6 92 aa12.61□□□□□ -0.39
PHTF1-205ENST00000393357 CTSGP08311 255 aa12.61□□□□□ -0.39
PHTF1-205ENST00000393357 NCOR2Q9Y618 2525 aa12.61□□□□□ -0.39
PHTF1-205ENST00000393357 F6UB75 175 aa12.6□□□□□ -0.39
PHTF1-205ENST00000393357 LGALS1P09382 135 aaKnown RBP12.6□□□□□ -0.39
PHTF1-205ENST00000393357 HIGD1BQ9P298 99 aa12.6□□□□□ -0.39
PHTF1-205ENST00000393357 SETD2Q9BYW2 2564 aaPredicted RBP12.6□□□□□ -0.39
PHTF1-205ENST00000393357 GRNP28799 593 aaKnown RBP12.6□□□□□ -0.39
PHTF1-205ENST00000393357 SRSF1Q07955 248 aaKnown RBP eCLIP12.6□□□□□ -0.39
PHTF1-205ENST00000393357 Q1RN00 199 aa12.6□□□□□ -0.39
PHTF1-205ENST00000393357 MRAP2Q96G30 205 aa12.6□□□□□ -0.39
PHTF1-205ENST00000393357 ANAPC13Q9BS18 74 aa12.6□□□□□ -0.39
PHTF1-205ENST00000393357 CEACAM4O75871 244 aa12.59□□□□□ -0.39
PHTF1-205ENST00000393357 NPC2P61916 151 aa12.59□□□□□ -0.39
PHTF1-205ENST00000393357 FAM74A4Q5TZK3 123 aa12.59□□□□□ -0.39
PHTF1-205ENST00000393357 ASCL5Q7RTU5 278 aa12.59□□□□□ -0.39
PHTF1-205ENST00000393357 DPM3Q9P2X0 92 aa12.59□□□□□ -0.39
PHTF1-205ENST00000393357 F8W735 103 aaPredicted RBP12.59□□□□□ -0.39
PHTF1-205ENST00000393357 C5orf64Q2M2E5 130 aa12.59□□□□□ -0.39
PHTF1-205ENST00000393357 DLX4Q92988 240 aaPredicted RBP12.59□□□□□ -0.39
PHTF1-205ENST00000393357 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.58□□□□□ -0.4
PHTF1-205ENST00000393357 IGKV3-20P01619 116 aa12.58□□□□□ -0.4
PHTF1-205ENST00000393357 C16orf92Q96LL3 132 aa12.58□□□□□ -0.4
PHTF1-205ENST00000393357 SPATA25Q9BR10 227 aa12.58□□□□□ -0.4
PHTF1-205ENST00000393357 ADARB2-AS1A8MUL3 147 aa12.58□□□□□ -0.4
PHTF1-205ENST00000393357 F8VRH5 84 aa12.58□□□□□ -0.4
PHTF1-205ENST00000393357 H7C1H1 209 aa12.58□□□□□ -0.4
PHTF1-205ENST00000393357 IGHV4-39P01824 125 aa12.58□□□□□ -0.4
PHTF1-205ENST00000393357 RPL39P62891 51 aaKnown RBP12.58□□□□□ -0.4
PHTF1-205ENST00000393357 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
PHTF1-205ENST00000393357 JPT2Q9H910 190 aa12.58□□□□□ -0.4
PHTF1-205ENST00000393357 DUSP14O95147 198 aaKnown RBP12.57□□□□□ -0.4
PHTF1-205ENST00000393357 Q6ZS46 218 aa12.57□□□□□ -0.4
PHTF1-205ENST00000393357 TRPT1Q86TN4 253 aaKnown RBP12.57□□□□□ -0.4
PHTF1-205ENST00000393357 RAB1BQ9H0U4 201 aa12.57□□□□□ -0.4
PHTF1-205ENST00000393357 ZMAT4Q9H898 229 aa12.57□□□□□ -0.4
PHTF1-205ENST00000393357 TSPAN13O95857 204 aa12.57□□□□□ -0.4
PHTF1-205ENST00000393357 CDIP1Q9H305 208 aa12.57□□□□□ -0.4
PHTF1-205ENST00000393357 PRO0461Q9UI25 63 aa12.57□□□□□ -0.4
PHTF1-205ENST00000393357 PHLDA3Q9Y5J5 127 aa12.57□□□□□ -0.4
PHTF1-205ENST00000393357 CSMD2Q7Z408 3487 aa12.57□□□□□ -0.4
PHTF1-205ENST00000393357 PTPRQQ9UMZ3 2332 aa12.57□□□□□ -0.4
PHTF1-205ENST00000393357 A0A087WWL8 130 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 PDE6HQ13956 83 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 OPRPNQ99935 248 aaPredicted RBP12.56□□□□□ -0.4
PHTF1-205ENST00000393357 CHD8Q9HCK8 2581 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 GNRH2O43555 120 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 PRR9Q5T870 116 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 Q6ZUT4 128 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 GATD1Q8NB37 220 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 C1QTNF4Q9BXJ3 329 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 BSNQ9UPA5 3926 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 TCL1BO95988 128 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 NRACQ8N912 160 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 NUP37Q8NFH4 326 aa12.56□□□□□ -0.4
PHTF1-205ENST00000393357 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
PHTF1-205ENST00000393357 C9JAW5 83 aa12.55□□□□□ -0.4
PHTF1-205ENST00000393357 ZNF883P0CG24 379 aa12.55□□□□□ -0.4
PHTF1-205ENST00000393357 RNASE4P34096 147 aaKnown RBP12.55□□□□□ -0.4
PHTF1-205ENST00000393357 COL27A1Q8IZC6 1860 aaPredicted RBP12.55□□□□□ -0.4
PHTF1-205ENST00000393357 IGLV11-55A0A075B6I3 123 aa12.55□□□□□ -0.4
PHTF1-205ENST00000393357 CRIP2P52943 208 aaPredicted RBP12.55□□□□□ -0.4
PHTF1-205ENST00000393357 PLNP26678 52 aa12.54□□□□□ -0.4
PHTF1-205ENST00000393357 TMEM219Q86XT9 240 aa12.54□□□□□ -0.4
PHTF1-205ENST00000393357 ZNF292O60281 2723 aa12.54□□□□□ -0.4
PHTF1-205ENST00000393357 SMIM2Q9BVW6 85 aa12.54□□□□□ -0.4
PHTF1-205ENST00000393357 IGLV2-18A0A075B6J9 118 aa12.54□□□□□ -0.4
PHTF1-205ENST00000393357 TRAV2A0A0B4J234 112 aa12.54□□□□□ -0.4
PHTF1-205ENST00000393357 HTN1P15515 57 aa12.54□□□□□ -0.4
PHTF1-205ENST00000393357 LINC00477Q96M19 166 aa12.54□□□□□ -0.4
PHTF1-205ENST00000393357 SMPXQ9UHP9 88 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms