RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 KLLNB2CW77 178 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 EDN2P20800 178 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 MS4A6AQ9H2W1 248 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 SCRT2Q9NQ03 307 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 PRRC2AP48634 2157 aaKnown RBP10.76□□□□□ -0.69
MKS1-203ENST00000393120 IGKV3-7A0A075B6H7 116 aa10.75□□□□□ -0.69
MKS1-203ENST00000393120 F6UB75 175 aa10.75□□□□□ -0.69
MKS1-203ENST00000393120 ASIPP42127 132 aa10.75□□□□□ -0.69
MKS1-203ENST00000393120 HNRNPA3P51991 378 aaKnown RBP10.75□□□□□ -0.69
MKS1-203ENST00000393120 DEFB1P60022 68 aa10.75□□□□□ -0.69
MKS1-203ENST00000393120 ODF3Q96PU9 254 aa10.75□□□□□ -0.69
MKS1-203ENST00000393120 CR1P17927 2039 aa10.75□□□□□ -0.69
MKS1-203ENST00000393120 H3BVH4 76 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 GAS8-AS1O95177 125 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 TSPOP30536 169 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 RNASE4P34096 147 aaKnown RBP10.74□□□□□ -0.69
MKS1-203ENST00000393120 TEX29Q8N6K0 151 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 OR2K2Q8NGT1 345 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 HSBP1L1C9JCN9 74 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 SRD5A1P18405 259 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 ANXA2RQ3ZCQ2 193 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 Q8N8P6 123 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 MRAP2Q96G30 205 aa10.74□□□□□ -0.69
MKS1-203ENST00000393120 ANKRD17O75179 2603 aaKnown RBP10.74□□□□□ -0.69
MKS1-203ENST00000393120 K7EQG2 157 aa10.73□□□□□ -0.69
MKS1-203ENST00000393120 FCER1GP30273 86 aa10.73□□□□□ -0.69
MKS1-203ENST00000393120 LGALS9BQ3B8N2 356 aa10.73□□□□□ -0.69
MKS1-203ENST00000393120 LGALS9CQ6DKI2 356 aa10.73□□□□□ -0.69
MKS1-203ENST00000393120 TMEM86BQ8N661 226 aa10.73□□□□□ -0.69
MKS1-203ENST00000393120 NRACQ8N912 160 aa10.73□□□□□ -0.69
MKS1-203ENST00000393120 TIMM8BQ9Y5J9 83 aaPredicted RBP10.73□□□□□ -0.69
MKS1-203ENST00000393120 LRRK2Q5S007 2527 aa10.73□□□□□ -0.69
MKS1-203ENST00000393120 USP9YO00507 2555 aaPredicted RBP10.72□□□□□ -0.69
MKS1-203ENST00000393120 IGLV2-18A0A075B6J9 118 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 IGHV4OR15-8A0A075B7B6 117 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 A0A087WW49 117 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 hDV102S1A0JD36 115 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 J3KRW8 73 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 CELSR1Q9NYQ6 3014 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 GATA1P15976 413 aaPredicted RBP10.72□□□□□ -0.69
MKS1-203ENST00000393120 S100A4P26447 101 aaKnown RBP10.72□□□□□ -0.69
MKS1-203ENST00000393120 HOXD3P31249 432 aaPredicted RBP10.72□□□□□ -0.69
MKS1-203ENST00000393120 SYNJ2BPP57105 145 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
MKS1-203ENST00000393120 LINC00469Q8N7U9 141 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 DPF1Q92782 380 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 IFI27L1Q96BM0 104 aa10.72□□□□□ -0.69
MKS1-203ENST00000393120 UTP20O75691 2785 aaKnown RBP10.72□□□□□ -0.69
MKS1-203ENST00000393120 CELSR2Q9HCU4 2923 aa10.71□□□□□ -0.69
MKS1-203ENST00000393120 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.69
MKS1-203ENST00000393120 MCRIP2Q9BUT9 160 aaKnown RBP10.71□□□□□ -0.69
MKS1-203ENST00000393120 A0A0J9YX75 114 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 H0Y8G0 127 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 NXPH4O95158 308 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 RNASE3P12724 160 aaKnown RBP10.7□□□□□ -0.7
MKS1-203ENST00000393120 LEPP41159 167 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 KIR3DS1Q14943 382 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 PHLDA3Q9Y5J5 127 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 PTPN13Q12923 2485 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 ZFHX3Q15911 3703 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 COL5A1-AS1Q5SY13 56 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 DPH3P1Q9H4G8 78 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 GOLT1BQ9Y3E0 138 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 SELENOKQ9Y6D0 94 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 CRYBG3Q68DQ2 2970 aa10.7□□□□□ -0.7
MKS1-203ENST00000393120 GNRH2O43555 120 aa10.69□□□□□ -0.7
MKS1-203ENST00000393120 PSMG4Q5JS54 123 aa10.69□□□□□ -0.7
MKS1-203ENST00000393120 POM121L12Q8N7R1 296 aa10.69□□□□□ -0.7
MKS1-203ENST00000393120 M0R381 172 aa10.68□□□□□ -0.7
MKS1-203ENST00000393120 ZNF688P0C7X2 276 aa10.68□□□□□ -0.7
MKS1-203ENST00000393120 FXYD7P58549 80 aa10.68□□□□□ -0.7
MKS1-203ENST00000393120 SLC25A34Q6PIV7 304 aa10.68□□□□□ -0.7
MKS1-203ENST00000393120 PMCHL2Q9BQD1 86 aa10.68□□□□□ -0.7
MKS1-203ENST00000393120 FAM159AQ6UWV7 190 aa10.68□□□□□ -0.7
MKS1-203ENST00000393120 C20orf78Q9BR46 151 aa10.68□□□□□ -0.7
MKS1-203ENST00000393120 NAV2Q8IVL1 2488 aa10.68□□□□□ -0.7
MKS1-203ENST00000393120 POLQO75417 2590 aa10.67□□□□□ -0.7
MKS1-203ENST00000393120 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
MKS1-203ENST00000393120 C7orf71A4D174 169 aa10.67□□□□□ -0.7
MKS1-203ENST00000393120 TCAPO15273 167 aa10.67□□□□□ -0.7
MKS1-203ENST00000393120 DUSP14O95147 198 aaKnown RBP10.67□□□□□ -0.7
MKS1-203ENST00000393120 TFPI2P48307 235 aa10.67□□□□□ -0.7
MKS1-203ENST00000393120 LAGE3Q14657 143 aa10.67□□□□□ -0.7
MKS1-203ENST00000393120 OR1N2Q8NGR9 330 aa10.67□□□□□ -0.7
MKS1-203ENST00000393120 K7EMI3 77 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 PPP1R17O96001 155 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 BATFQ16520 125 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 ADAMTSL5Q6ZMM2 481 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 WFDC11Q8NEX6 87 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 C4orf3Q8WVX3 66 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 AP1S3Q96PC3 154 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 LINC01619G3V211 115 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 CD5LO43866 347 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 COX8AP10176 69 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 FOXI2Q6ZQN5 318 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
MKS1-203ENST00000393120 TMEM158Q8WZ71 300 aa10.66□□□□□ -0.7
MKS1-203ENST00000393120 SMIM2Q9BVW6 85 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms