RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 CLPSL1A2RUU4 121 aa13.8□□□□□ -0.2
ERCC2-201ENST00000391941 ZNF479Q96JC4 524 aa13.8□□□□□ -0.2
ERCC2-201ENST00000391941 NDUFS8O00217 210 aa13.8□□□□□ -0.2
ERCC2-201ENST00000391941 PRTN3P24158 256 aa13.8□□□□□ -0.2
ERCC2-201ENST00000391941 ATP5G2Q06055 141 aa13.8□□□□□ -0.2
ERCC2-201ENST00000391941 SAMD13Q5VXD3 122 aa13.8□□□□□ -0.2
ERCC2-201ENST00000391941 Q8N8P6 123 aa13.8□□□□□ -0.2
ERCC2-201ENST00000391941 NCOR2Q9Y618 2525 aa13.8□□□□□ -0.2
ERCC2-201ENST00000391941 CCL21O00585 134 aa13.79□□□□□ -0.2
ERCC2-201ENST00000391941 TMEM219Q86XT9 240 aa13.79□□□□□ -0.2
ERCC2-201ENST00000391941 C12orf74Q32Q52 190 aa13.79□□□□□ -0.2
ERCC2-201ENST00000391941 MYOZ3Q8TDC0 251 aa13.79□□□□□ -0.2
ERCC2-201ENST00000391941 ZFAND3Q9H8U3 227 aa13.79□□□□□ -0.2
ERCC2-201ENST00000391941 CCDC140Q96MF4 163 aa13.78□□□□□ -0.2
ERCC2-201ENST00000391941 LAGE3Q14657 143 aa13.78□□□□□ -0.2
ERCC2-201ENST00000391941 Q8N9W7 124 aa13.78□□□□□ -0.2
ERCC2-201ENST00000391941 HIF1ANQ9NWT6 349 aa13.78□□□□□ -0.2
ERCC2-201ENST00000391941 TGFAP01135 160 aa13.77□□□□□ -0.2
ERCC2-201ENST00000391941 Q8N6K4 173 aa13.77□□□□□ -0.2
ERCC2-201ENST00000391941 F6UB75 175 aa13.77□□□□□ -0.21
ERCC2-201ENST00000391941 SCGB2A1O75556 95 aa13.77□□□□□ -0.21
ERCC2-201ENST00000391941 ATP5LO75964 103 aa13.77□□□□□ -0.21
ERCC2-201ENST00000391941 C14orf178Q8N769 122 aaPredicted RBP13.77□□□□□ -0.21
ERCC2-201ENST00000391941 M0R1W7 72 aa13.77□□□□□ -0.21
ERCC2-201ENST00000391941 C8orf86Q6ZUL3 223 aa13.77□□□□□ -0.21
ERCC2-201ENST00000391941 C20orf173Q96LM9 149 aa13.76□□□□□ -0.21
ERCC2-201ENST00000391941 SPANXB1Q9NS25 103 aaPredicted RBP13.76□□□□□ -0.21
ERCC2-201ENST00000391941 TMEM78Q5T7P6 136 aa13.76□□□□□ -0.21
ERCC2-201ENST00000391941 KLHL30-AS1Q8NEE0 82 aa13.76□□□□□ -0.21
ERCC2-201ENST00000391941 SPAG8Q99932 426 aaPredicted RBP13.76□□□□□ -0.21
ERCC2-201ENST00000391941 TM2D2Q9BX73 214 aa13.76□□□□□ -0.21
ERCC2-201ENST00000391941 E9PLD3 99 aa13.75□□□□□ -0.21
ERCC2-201ENST00000391941 ZNF502Q8TBZ5 544 aa13.75□□□□□ -0.21
ERCC2-201ENST00000391941 TIMD4Q96H15 378 aa13.75□□□□□ -0.21
ERCC2-201ENST00000391941 SMPXQ9UHP9 88 aa13.75□□□□□ -0.21
ERCC2-201ENST00000391941 MGPP08493 103 aa13.75□□□□□ -0.21
ERCC2-201ENST00000391941 PSMG4Q5JS54 123 aa13.75□□□□□ -0.21
ERCC2-201ENST00000391941 CCDC144NLQ6NUI1 221 aa13.75□□□□□ -0.21
ERCC2-201ENST00000391941 VKORC1Q9BQB6 163 aa13.75□□□□□ -0.21
ERCC2-201ENST00000391941 PRSS29PA6NIE9 313 aa13.74□□□□□ -0.21
ERCC2-201ENST00000391941 FOXI2Q6ZQN5 318 aa13.74□□□□□ -0.21
ERCC2-201ENST00000391941 SORL1Q92673 2214 aa13.74□□□□□ -0.21
ERCC2-201ENST00000391941 TRBV12-3P01733 135 aa13.74□□□□□ -0.21
ERCC2-201ENST00000391941 A0A087WX48 190 aa13.73□□□□□ -0.21
ERCC2-201ENST00000391941 SRD5A1P18405 259 aa13.73□□□□□ -0.21
ERCC2-201ENST00000391941 PLEKHB2Q96CS7 222 aa13.73□□□□□ -0.21
ERCC2-201ENST00000391941 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.73□□□□□ -0.213e-7■■■□□ 17.2
ERCC2-201ENST00000391941 RBAKDNA6NC62 111 aa13.73□□□□□ -0.21
ERCC2-201ENST00000391941 GAGE12HA6NDE8 117 aa13.73□□□□□ -0.21
ERCC2-201ENST00000391941 HLA-DRB4P13762 266 aa13.73□□□□□ -0.21
ERCC2-201ENST00000391941 HLA-DRB4X5D2U9 266 aa13.73□□□□□ -0.21
ERCC2-201ENST00000391941 A0A1W2PPR1 153 aa13.72□□□□□ -0.21
ERCC2-201ENST00000391941 PTH2Q96A98 100 aa13.72□□□□□ -0.21
ERCC2-201ENST00000391941 C16orf92Q96LL3 132 aa13.72□□□□□ -0.21
ERCC2-201ENST00000391941 SCGB3A1Q96QR1 104 aa13.72□□□□□ -0.21
ERCC2-201ENST00000391941 RPL11P62913 178 aaKnown RBP13.72□□□□□ -0.21
ERCC2-201ENST00000391941 EBI3Q14213 229 aa13.72□□□□□ -0.21
ERCC2-201ENST00000391941 GNRH2O43555 120 aa13.71□□□□□ -0.21
ERCC2-201ENST00000391941 UNQ9165/PRO28630Q6UXU0 137 aa13.71□□□□□ -0.21
ERCC2-201ENST00000391941 C20orf78Q9BR46 151 aa13.71□□□□□ -0.21
ERCC2-201ENST00000391941 SLC50A1Q9BRV3 221 aa13.71□□□□□ -0.21
ERCC2-201ENST00000391941 UTP20O75691 2785 aaKnown RBP13.71□□□□□ -0.21
ERCC2-201ENST00000391941 SPTBN4Q9H254 2564 aa13.7□□□□□ -0.22
ERCC2-201ENST00000391941 CD300EQ496F6 205 aaPredicted RBP13.7□□□□□ -0.22
ERCC2-201ENST00000391941 JPT2Q9H910 190 aa13.7□□□□□ -0.22
ERCC2-201ENST00000391941 HIVEP3Q5T1R4 2406 aa13.7□□□□□ -0.22
ERCC2-201ENST00000391941 SRSF1Q07955 248 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■■■□ 19.8
ERCC2-201ENST00000391941 ZFP2Q6ZN57 461 aa13.7□□□□□ -0.22
ERCC2-201ENST00000391941 FAM110DQ8TAY7 271 aaPredicted RBP13.7□□□□□ -0.22
ERCC2-201ENST00000391941 RASL10AQ92737 203 aa13.7□□□□□ -0.22
ERCC2-201ENST00000391941 PGPEP1Q9NXJ5 209 aa13.7□□□□□ -0.22
ERCC2-201ENST00000391941 SAA4P35542 130 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 A0A1B0GWB2 263 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 IGHV3-11P01762 117 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 EDN2P20800 178 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 FOXC1Q12948 553 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 SIGMAR1Q99720 223 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 SMIM2Q9BVW6 85 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 TRBV7-3A0A075B6L6 115 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 OR11H12B2RN74 326 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 APOMO95445 188 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 S100A4P26447 101 aaKnown RBP13.69□□□□□ -0.22
ERCC2-201ENST00000391941 ARL3P36405 182 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 RAB9AP51151 201 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 SCGB2A2Q13296 93 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 MORN3Q6PF18 240 aaPredicted RBP13.69□□□□□ -0.22
ERCC2-201ENST00000391941 OR11H1Q8NG94 326 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 ZNF418Q8TF45 676 aaPredicted RBP13.69□□□□□ -0.22
ERCC2-201ENST00000391941 PRADC1Q9BSG0 188 aa13.69□□□□□ -0.22
ERCC2-201ENST00000391941 CREBBPQ92793 2442 aa13.68□□□□□ -0.22
ERCC2-201ENST00000391941 LOC107984156A0A0G2JMH3 177 aa13.68□□□□□ -0.22
ERCC2-201ENST00000391941 LGALS1P09382 135 aaKnown RBP13.68□□□□□ -0.22
ERCC2-201ENST00000391941 GAGE13Q4V321 117 aa13.68□□□□□ -0.22
ERCC2-201ENST00000391941 ARL17AQ8IVW1 177 aa13.68□□□□□ -0.22
ERCC2-201ENST00000391941 SLC25A16P16260 332 aa13.68□□□□□ -0.22
ERCC2-201ENST00000391941 RRN3P1Q2M238 152 aa13.68□□□□□ -0.22
ERCC2-201ENST00000391941 DOPEY2Q9Y3R5 2298 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 MYMXA0A1B0GTQ4 84 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 F8VRH5 84 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 268.6 ms