RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 SNAPC5O75971 98 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 NDUFB6O95139 128 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 PIPP12273 146 aaPredicted RBP0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 POLR2JP52435 117 aaKnown RBP0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 KRTAP1-1Q07627 177 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 SPANXN1Q5VSR9 72 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 C12orf73Q69YU5 71 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 Q6AWC8 147 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 OR2T2Q6IF00 324 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 Q6ZRN7 208 aaPredicted RBP0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 PLPP5Q8NEB5 264 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 SPTSSAQ969W0 71 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 SEC11CQ9BY50 192 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 REG4Q9BYZ8 158 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 RPRMQ9NS64 109 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 MED9Q9NWA0 146 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 KIF13AQ9H1H9 1805 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 HELZP42694 1942 aaKnown RBP0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 MYH13Q9UKX3 1938 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 ZFC3H1O60293 1989 aaKnown RBP0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 DAPK1P53355 1430 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 CNTLNQ9NXG0 1405 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 ZFHX2Q9C0A1 2572 aaPredicted RBP0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 MICAL3Q7RTP6 2002 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 PZPP20742 1482 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 ZFYVE16Q7Z3T8 1539 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 ADGRB2O60241 1585 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 NRKQ7Z2Y5 1582 aa0.79□□□□□ -2.28
TRAJ39-201ENST00000390498 SCRIBQ14160 1630 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 COL5A3P25940 1745 aaPredicted RBP0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 BCORL1Q5H9F3 1711 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 TRGV2A0A075B6R0 118 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 IGLV3-32A0A0A0MS00 114 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 A0A0J9YY99 117 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 APOC4-APOC2K7ER74 178 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 M0R2N4 97 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 INE1O15225 51 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 KLF7O75840 302 aaPredicted RBP0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 APOC2P02655 101 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 IL5P05113 134 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 PIRTP0C851 137 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 RHOHQ15669 191 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 MPV17LQ2QL34 196 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 MRPL54Q6P161 138 aaKnown RBP0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 UNQ5815/PRO19632Q6UWF5 114 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 Q6ZS92 163 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 GTF2H5Q6ZYL4 71 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 NDUFA11Q86Y39 141 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 C8orf59Q8N0T1 100 aaPredicted RBP0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 ACBD7Q8N6N7 88 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 CDC42SE1Q9NRR8 79 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 TMEM242Q9NWH2 141 aa0.78□□□□□ -2.28
TRAJ39-201ENST00000390498 LRP5O75197 1615 aa0.78□□□□□ -2.29
TRAJ39-201ENST00000390498 AKAP11Q9UKA4 1901 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 NUMA1Q14980 2115 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 TRAV30A0A087WSZ9 112 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 LOC110117498A0A087WWA1 95 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 TRAV17A0A0B4J275 112 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 PIGBOS1A0A0B4J2F0 54 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 TMEM30CPA0ZSE6 113 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 TMEM218A2RU14 115 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 JMJD7-PLA2G4BH0Y9G9 81 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 SNCGO76070 127 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 PPYP01298 95 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 IFNA17P01571 189 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 IGHV3-30P01768 117 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 IGHV3-30-5P0DP03 117 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 KRTAP10-10P60014 251 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 KRTAP10-1P60331 282 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 DEFB103AP81534 67 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 CATR1Q13166 79 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 KRTAP13-4Q3LI77 160 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 C9orf153Q5TBE3 101 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 LSM10Q969L4 123 aaKnown RBP0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 LINC00526Q96FQ7 95 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 DMAC1Q96GE9 116 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 TMEM141Q96I45 108 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 MRPL57Q9BQC6 102 aaKnown RBP0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 NDUFA12Q9UI09 145 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 C22orf24Q9Y442 160 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 SNURFQ9Y675 71 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 PTPRMP28827 1452 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 CASZ1Q86V15 1759 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 ANK1P16157 1881 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 MPDZO75970 2070 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 MYO9BQ13459 2157 aa0.77□□□□□ -2.29
TRAJ39-201ENST00000390498 BRWD1Q9NSI6 2320 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 SCN3AQ9NY46 2000 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 MYH9P35579 1960 aaKnown RBP0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 KIAA1549Q9HCM3 1950 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 CEP192Q8TEP8 1941 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 PLXNA2O75051 1894 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 SIP14410 1827 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 LAMB1P07942 1786 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 VWDEQ8N2E2 1590 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 TRBV10-1A0A0K0K1A3 114 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 CXorf51AA0A1B0GTR3 108 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 NUPR2A6NF83 97 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 CCL25O15444 150 aa0.76□□□□□ -2.29
TRAJ39-201ENST00000390498 HCRTO43612 131 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms