RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 TMEM78Q5T7P6 136 aa9.15□□□□□ -0.94
SPTBN1-203ENST00000389980 CLEC5AQ9NY25 188 aa9.15□□□□□ -0.94
SPTBN1-203ENST00000389980 ZNF492Q9P255 531 aa9.15□□□□□ -0.94
SPTBN1-203ENST00000389980 COX11Q9Y6N1 276 aa9.15□□□□□ -0.94
SPTBN1-203ENST00000389980 TMEM61Q8N0U2 210 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 ALKBH7Q9BT30 221 aaPredicted RBP9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 FBN1P35555 2871 aaKnown RBP9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 K7EQG2 157 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 OVOL1O14753 267 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 CT45A10P0DMU9 189 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 IGLC3P0DOY3 106 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 ID1P41134 155 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 ZNF138P52744 262 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 OR10J3Q5JRS4 329 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 PSMG4Q5JS54 123 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 GDF5OSQ5U4N7 250 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 C9orf47Q6ZRZ4 202 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 DYNLRB2Q8TF09 96 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 RPP21Q9H633 154 aaKnown RBP9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 TRRAPQ9Y4A5 3859 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 NOTCH3Q9UM47 2321 aa9.14□□□□□ -0.95
SPTBN1-203ENST00000389980 J3KRW8 73 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 MT-ND6P03923 174 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 CD33P20138 364 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 HNRNPA3P51991 378 aaKnown RBP9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 SAMD10Q9BYL1 202 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 NAT8BQ9UHF3 227 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 IZUMO1RA6ND01 250 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 FBLL1A6NHQ2 334 aaKnown RBP9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 F2Z2F3 143 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 SH2D1AO60880 128 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 GPX1P07203 203 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 PMCHL1Q16048 86 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 DEFB114Q30KQ6 69 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 TDRG1Q3Y452 100 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 CD300EQ496F6 205 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 Q6ZQT7 251 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 RBPMS2Q6ZRY4 209 aaKnown RBP9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 STPG4Q8N801 248 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 OR8A1Q8NGG7 326 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 OR10J6PQ8NGY7 276 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 NDFIP1Q9BT67 221 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 TP53TG3Q9ULZ0 132 aa9.13□□□□□ -0.95
SPTBN1-203ENST00000389980 NPIPB6E9PJ23 425 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 SPATA45Q537H7 98 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 PET117Q6UWS5 81 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 BAGE3Q86Y29 109 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 NUP35Q8NFH5 326 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 GNB1LQ9BYB4 327 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 TMSB15BA0A087X1C1 80 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 HIGD1CA8MV81 97 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 CIDEAO60543 219 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 SERF1AO75920 110 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 WDR73Q6P4I2 378 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 COX8CQ7Z4L0 72 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 NDUFA11Q86Y39 141 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 TSKUQ8WUA8 353 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 GTSF1Q8WW33 167 aa9.12□□□□□ -0.95
SPTBN1-203ENST00000389980 KIR3DS1Q14943 382 aa9.11□□□□□ -0.95
SPTBN1-203ENST00000389980 PRR9Q5T870 116 aa9.11□□□□□ -0.95
SPTBN1-203ENST00000389980 Q6ZN92 141 aa9.11□□□□□ -0.95
SPTBN1-203ENST00000389980 CAMPP49913 170 aa9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 LINC00310P59036 64 aa9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 Q8N976 141 aa9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 OR4C5Q8NGB2 326 aa9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 LINC00477Q96M19 166 aa9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 A8MWL6 223 aa9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 IGKV3-20P01619 116 aa9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 SAMD13Q5VXD3 122 aa9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 PGLYRP4Q96LB8 373 aa9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 SSBP4Q9BWG4 385 aaPredicted RBP9.1□□□□□ -0.95
SPTBN1-203ENST00000389980 HSBP1L1C9JCN9 74 aa9.09□□□□□ -0.95
SPTBN1-203ENST00000389980 SAP30O75446 220 aa9.09□□□□□ -0.95
SPTBN1-203ENST00000389980 TMEM189A5PLL7 270 aa9.09□□□□□ -0.95
SPTBN1-203ENST00000389980 DEFB131AP59861 70 aa9.09□□□□□ -0.95
SPTBN1-203ENST00000389980 SLAQ13239 276 aa9.09□□□□□ -0.95
SPTBN1-203ENST00000389980 CT83Q5H943 113 aa9.09□□□□□ -0.95
SPTBN1-203ENST00000389980 ZFAND2AQ8N6M9 145 aa9.09□□□□□ -0.95
SPTBN1-203ENST00000389980 C11orf21Q9P2W6 132 aa9.09□□□□□ -0.95
SPTBN1-203ENST00000389980 STAB1Q9NY15 2570 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 A0A0J9YX75 114 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 FABP5P3A8MUU1 101 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 APCSP02743 223 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 ORM1P02763 201 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 PF4P02776 101 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 TSPOP30536 169 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 ZNF575Q86XF7 245 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 SVIPQ8NHG7 77 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 TPPP3Q9BW30 176 aa9.08□□□□□ -0.96
SPTBN1-203ENST00000389980 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
SPTBN1-203ENST00000389980 SRIP30626 198 aa9.07□□□□□ -0.96
SPTBN1-203ENST00000389980 SPATA3Q8NHX4 192 aa9.07□□□□□ -0.96
SPTBN1-203ENST00000389980 KCNS1Q96KK3 526 aa9.07□□□□□ -0.96
SPTBN1-203ENST00000389980 FAM19A4Q96LR4 140 aa9.07□□□□□ -0.96
SPTBN1-203ENST00000389980 RNASE4P34096 147 aaKnown RBP9.07□□□□□ -0.96
SPTBN1-203ENST00000389980 KRTDAPP60985 99 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms