RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ZFP30Q9Y2G7 519 aa11.49□□□□□ -0.57
SNRPB-201ENST00000381342 RYR3Q15413 4870 aa11.49□□□□□ -0.57
SNRPB-201ENST00000381342 TRAV10A0A0B4J240 114 aa11.48□□□□□ -0.57
SNRPB-201ENST00000381342 PDE6DO43924 150 aa11.48□□□□□ -0.57
SNRPB-201ENST00000381342 S100A9P06702 114 aaKnown RBP11.48□□□□□ -0.57
SNRPB-201ENST00000381342 RPL35P42766 123 aaKnown RBP11.48□□□□□ -0.57
SNRPB-201ENST00000381342 TCL1AP56279 114 aa11.48□□□□□ -0.57
SNRPB-201ENST00000381342 TCTAP57738 103 aa11.48□□□□□ -0.57
SNRPB-201ENST00000381342 ZNF415Q09FC8 603 aa11.48□□□□□ -0.57
SNRPB-201ENST00000381342 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
SNRPB-201ENST00000381342 PLECQ15149 4684 aaKnown RBP11.47□□□□□ -0.57
SNRPB-201ENST00000381342 TRGV11A0A075B6L2 103 aa11.47□□□□□ -0.57
SNRPB-201ENST00000381342 TYMSP04818 313 aa11.47□□□□□ -0.57
SNRPB-201ENST00000381342 HTN3P15516 51 aa11.47□□□□□ -0.57
SNRPB-201ENST00000381342 TAGLN2P37802 199 aaKnown RBP11.47□□□□□ -0.57
SNRPB-201ENST00000381342 TDRG1Q3Y452 100 aa11.47□□□□□ -0.57
SNRPB-201ENST00000381342 SDF2L1Q9HCN8 221 aa11.47□□□□□ -0.57
SNRPB-201ENST00000381342 MDFICQ9P1T7 246 aa11.47□□□□□ -0.57
SNRPB-201ENST00000381342 DEFB131BA0A096LNP1 70 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 GAGE12BA1L429 117 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 RAB19A4D1S5 217 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 RBFOX3A6NFN3 312 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 IGLL5B9A064 214 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 GNRH2O43555 120 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 SH2D1AO60880 128 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 GAGE7O76087 117 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 GAGE12FP0CL80 117 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 GAGE12GP0CL81 117 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 GAGE12IP0CL82 117 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 DAZ2Q13117 558 aaKnown RBP11.46□□□□□ -0.57
SNRPB-201ENST00000381342 TOR2AQ5JU69 321 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 Q6ZTI0 123 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 COX8CQ7Z4L0 72 aa11.46□□□□□ -0.57
SNRPB-201ENST00000381342 IGHV3-16A0A0C4DH30 117 aa11.45□□□□□ -0.58
SNRPB-201ENST00000381342 CRIP1P50238 77 aa11.45□□□□□ -0.58
SNRPB-201ENST00000381342 CENPWQ5EE01 88 aa11.45□□□□□ -0.58
SNRPB-201ENST00000381342 ZNF506Q5JVG8 444 aa11.45□□□□□ -0.58
SNRPB-201ENST00000381342 COMMD7Q86VX2 200 aa11.45□□□□□ -0.58
SNRPB-201ENST00000381342 BAGE2Q86Y30 109 aa11.45□□□□□ -0.58
SNRPB-201ENST00000381342 LINC00612Q8N6U2 182 aa11.45□□□□□ -0.58
SNRPB-201ENST00000381342 KCNS1Q96KK3 526 aa11.45□□□□□ -0.58
SNRPB-201ENST00000381342 FAM210AQ96ND0 272 aa11.45□□□□□ -0.58
SNRPB-201ENST00000381342 MRPL16Q9NX20 251 aaKnown RBP11.45□□□□□ -0.58
SNRPB-201ENST00000381342 SACSQ9NZJ4 4579 aa11.44□□□□□ -0.58
SNRPB-201ENST00000381342 TRGV1A0A0A0MS02 117 aa11.44□□□□□ -0.58
SNRPB-201ENST00000381342 FABP5P3A8MUU1 101 aa11.44□□□□□ -0.58
SNRPB-201ENST00000381342 FAM162BQ5T6X4 162 aa11.44□□□□□ -0.58
SNRPB-201ENST00000381342 LGALS9CQ6DKI2 356 aa11.44□□□□□ -0.58
SNRPB-201ENST00000381342 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
SNRPB-201ENST00000381342 TRBV20OR9-2A0A075B6H5 130 aa11.43□□□□□ -0.58
SNRPB-201ENST00000381342 IGKV3D-20A0A0C4DH25 116 aa11.43□□□□□ -0.58
SNRPB-201ENST00000381342 M0R036 132 aa11.43□□□□□ -0.58
SNRPB-201ENST00000381342 SPINK4O60575 86 aa11.43□□□□□ -0.58
SNRPB-201ENST00000381342 ZNF674Q2M3X9 581 aa11.43□□□□□ -0.58
SNRPB-201ENST00000381342 EIF5A2Q9GZV4 153 aaKnown RBP11.43□□□□□ -0.58
SNRPB-201ENST00000381342 B4DEV8 164 aa11.42□□□□□ -0.58
SNRPB-201ENST00000381342 ORM1P02763 201 aa11.42□□□□□ -0.58
SNRPB-201ENST00000381342 GNG4P50150 75 aa11.42□□□□□ -0.58
SNRPB-201ENST00000381342 PRR27Q6MZM9 219 aa11.42□□□□□ -0.58
SNRPB-201ENST00000381342 UQCC3Q6UW78 93 aa11.42□□□□□ -0.58
SNRPB-201ENST00000381342 LYSTQ99698 3801 aa11.42□□□□□ -0.58
SNRPB-201ENST00000381342 SMDT1Q9H4I9 107 aa11.42□□□□□ -0.58
SNRPB-201ENST00000381342 ALMS1Q8TCU4 4167 aa11.42□□□□□ -0.58
SNRPB-201ENST00000381342 PGPEP1LA6NFU8 196 aa11.41□□□□□ -0.58
SNRPB-201ENST00000381342 NDUFS6O75380 124 aaKnown RBP11.41□□□□□ -0.58
SNRPB-201ENST00000381342 IGLV2-8P01709 118 aa11.41□□□□□ -0.58
SNRPB-201ENST00000381342 ATP5G1P05496 136 aa11.41□□□□□ -0.58
SNRPB-201ENST00000381342 TRGV2A0A075B6R0 118 aa11.4□□□□□ -0.58
SNRPB-201ENST00000381342 IGHV4-4A0A075B6R2 117 aa11.4□□□□□ -0.58
SNRPB-201ENST00000381342 TMSB15BA0A087X1C1 80 aa11.4□□□□□ -0.58
SNRPB-201ENST00000381342 KRBOX1C9JBD0 128 aa11.4□□□□□ -0.58
SNRPB-201ENST00000381342 TMEM250H0YL14 139 aa11.4□□□□□ -0.58
SNRPB-201ENST00000381342 MGST1P10620 155 aaKnown RBP11.4□□□□□ -0.58
SNRPB-201ENST00000381342 CEBPGP53567 150 aa11.4□□□□□ -0.58
SNRPB-201ENST00000381342 SPXQ9BT56 116 aa11.4□□□□□ -0.58
SNRPB-201ENST00000381342 PARLQ9H300 379 aa11.4□□□□□ -0.58
SNRPB-201ENST00000381342 F5H768 121 aa11.39□□□□□ -0.59
SNRPB-201ENST00000381342 PEA15Q15121 130 aa11.39□□□□□ -0.59
SNRPB-201ENST00000381342 LGALS9BQ3B8N2 356 aa11.39□□□□□ -0.59
SNRPB-201ENST00000381342 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
SNRPB-201ENST00000381342 SLC7A5P1Q8MH63 180 aa11.39□□□□□ -0.59
SNRPB-201ENST00000381342 C9orf85Q96MD7 179 aa11.39□□□□□ -0.59
SNRPB-201ENST00000381342 MUC4Q99102 2169 aa11.38□□□□□ -0.59
SNRPB-201ENST00000381342 GRIFINA4D1Z8 144 aa11.38□□□□□ -0.59
SNRPB-201ENST00000381342 M0R2P5 195 aa11.38□□□□□ -0.59
SNRPB-201ENST00000381342 RNASE3P12724 160 aaKnown RBP11.38□□□□□ -0.59
SNRPB-201ENST00000381342 ASIPP42127 132 aa11.38□□□□□ -0.59
SNRPB-201ENST00000381342 RPL19P84098 196 aaKnown RBP11.38□□□□□ -0.59
SNRPB-201ENST00000381342 TMEM88Q6PEY1 159 aa11.38□□□□□ -0.59
SNRPB-201ENST00000381342 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
SNRPB-201ENST00000381342 RYR2Q92736 4967 aa11.38□□□□□ -0.59
SNRPB-201ENST00000381342 DNAH1Q9P2D7 4330 aa11.38□□□□□ -0.59
SNRPB-201ENST00000381342 H3BVH4 76 aa11.37□□□□□ -0.59
SNRPB-201ENST00000381342 IGHV3-53P01767 116 aa11.37□□□□□ -0.59
SNRPB-201ENST00000381342 HOXA5P20719 270 aa11.37□□□□□ -0.59
SNRPB-201ENST00000381342 S100A4P26447 101 aaKnown RBP11.37□□□□□ -0.59
SNRPB-201ENST00000381342 SRSF3P84103 164 aaKnown RBP11.37□□□□□ -0.59
SNRPB-201ENST00000381342 OR5I1Q13606 314 aa11.37□□□□□ -0.59
SNRPB-201ENST00000381342 SMIM12Q96EX1 92 aa11.37□□□□□ -0.59
SNRPB-201ENST00000381342 NDUFAF3Q9BU61 184 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms