RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
PDX1-201ENST00000381033 NTF3P20783 257 aa13.17□□□□□ -0.3
PDX1-201ENST00000381033 PPIFP30405 207 aaKnown RBP13.17□□□□□ -0.3
PDX1-201ENST00000381033 C10orf99Q6UWK7 81 aa13.17□□□□□ -0.3
PDX1-201ENST00000381033 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.17□□□□□ -0.3
PDX1-201ENST00000381033 C12orf54Q6X4T0 127 aa13.17□□□□□ -0.3
PDX1-201ENST00000381033 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
PDX1-201ENST00000381033 IGHV4-59P01825 116 aa13.17□□□□□ -0.3
PDX1-201ENST00000381033 PRR25Q96S07 402 aa13.17□□□□□ -0.3
PDX1-201ENST00000381033 NF1P21359 2839 aa13.17□□□□□ -0.3
PDX1-201ENST00000381033 TRBV6-1A0A0K0K1D8 114 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 MRPL23Q16540 153 aaKnown RBP13.16□□□□□ -0.3
PDX1-201ENST00000381033 DEFB112Q30KQ8 113 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 RASL11AQ6T310 242 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 PRRC2AP48634 2157 aaKnown RBP13.16□□□□□ -0.3
PDX1-201ENST00000381033 MYO9AB2RTY4 2548 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 SH2D1AO60880 128 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 IGHG2P01859 326 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 PMCHL1Q16048 86 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 C8orf86Q6ZUL3 223 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 SIGLECL1Q8N7X8 197 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 KCNS1Q96KK3 526 aa13.16□□□□□ -0.3
PDX1-201ENST00000381033 FABP5P3A8MUU1 101 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 IGF1P05019 195 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 SPINK8P0C7L1 97 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 ATP5L2Q7Z4Y8 100 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 URB1-AS1Q96HZ7 61 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 NRN1Q9NPD7 142 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 ZNF138P52744 262 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 DEFB1P60022 68 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 Q6ZQT7 251 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 ZNF575Q86XF7 245 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 AP1S3Q96PC3 154 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 GFRA4Q9GZZ7 299 aa13.15□□□□□ -0.3
PDX1-201ENST00000381033 TRAV8-2A0A0B4J237 113 aa13.14□□□□□ -0.31
PDX1-201ENST00000381033 C7orf71A4D174 169 aa13.14□□□□□ -0.31
PDX1-201ENST00000381033 EDN2P20800 178 aa13.14□□□□□ -0.31
PDX1-201ENST00000381033 ZNF324O75467 553 aaPredicted RBP13.14□□□□□ -0.31
PDX1-201ENST00000381033 CT45A10P0DMU9 189 aa13.14□□□□□ -0.31
PDX1-201ENST00000381033 OR2K2Q8NGT1 345 aa13.14□□□□□ -0.31
PDX1-201ENST00000381033 METTL26Q96S19 204 aa13.14□□□□□ -0.31
PDX1-201ENST00000381033 CYSLTR1Q9Y271 337 aa13.14□□□□□ -0.31
PDX1-201ENST00000381033 ITPR3Q14573 2671 aa13.14□□□□□ -0.31
PDX1-201ENST00000381033 F5H768 121 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 CR1P17927 2039 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 HIST2H2BCQ6DN03 193 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 GAGE12JA6NER3 117 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 GAGE7O76087 117 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 GAGE12FP0CL80 117 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 GAGE12GP0CL81 117 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 GAGE12IP0CL82 117 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 GAGE4Q13068 117 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 RNASEKQ6P5S7 137 aaKnown RBP13.13□□□□□ -0.31
PDX1-201ENST00000381033 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
PDX1-201ENST00000381033 MAP1LC3CQ9BXW4 147 aa13.13□□□□□ -0.31
PDX1-201ENST00000381033 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
PDX1-201ENST00000381033 SEC61GP60059 68 aa13.12□□□□□ -0.31
PDX1-201ENST00000381033 IL17RELQ6ZVW7 336 aa13.12□□□□□ -0.31
PDX1-201ENST00000381033 LINC01356Q8N9X3 169 aa13.12□□□□□ -0.31
PDX1-201ENST00000381033 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
PDX1-201ENST00000381033 FAM223BA6NKX1 122 aa13.12□□□□□ -0.31
PDX1-201ENST00000381033 LYZL1Q6UWQ5 148 aa13.12□□□□□ -0.31
PDX1-201ENST00000381033 FAM223AQ8IWN6 122 aa13.12□□□□□ -0.31
PDX1-201ENST00000381033 ST20Q9HBF5 79 aa13.12□□□□□ -0.31
PDX1-201ENST00000381033 A0A0G2JLM5 398 aa13.11□□□□□ -0.31
PDX1-201ENST00000381033 HAX1O00165 279 aa13.11□□□□□ -0.31
PDX1-201ENST00000381033 SLC25A16P16260 332 aa13.11□□□□□ -0.31
PDX1-201ENST00000381033 FAM162BQ5T6X4 162 aa13.11□□□□□ -0.31
PDX1-201ENST00000381033 JMJD8Q96S16 334 aa13.11□□□□□ -0.31
PDX1-201ENST00000381033 U3KQE9 123 aa13.11□□□□□ -0.31
PDX1-201ENST00000381033 OR4X2Q8NGF9 303 aa13.1□□□□□ -0.31
PDX1-201ENST00000381033 ITPR2Q14571 2701 aa13.1□□□□□ -0.31
PDX1-201ENST00000381033 C9orf118A6NHY6 69 aa13.1□□□□□ -0.31
PDX1-201ENST00000381033 CSN3P07498 182 aa13.1□□□□□ -0.31
PDX1-201ENST00000381033 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
PDX1-201ENST00000381033 HELZ2Q9BYK8 2649 aaKnown RBP13.09□□□□□ -0.31
PDX1-201ENST00000381033 A0A087X0K7 114 aa13.09□□□□□ -0.31
PDX1-201ENST00000381033 HSBP1O75506 76 aa13.09□□□□□ -0.31
PDX1-201ENST00000381033 DSCR9P59020 149 aa13.09□□□□□ -0.31
PDX1-201ENST00000381033 KLF5Q13887 457 aaPredicted RBP13.09□□□□□ -0.31
PDX1-201ENST00000381033 C20orf173Q96LM9 149 aa13.09□□□□□ -0.31
PDX1-201ENST00000381033 SORL1Q92673 2214 aa13.09□□□□□ -0.31
PDX1-201ENST00000381033 FLNAP21333 2647 aaKnown RBP13.09□□□□□ -0.31
PDX1-201ENST00000381033 TRAV9-2A0A087WT02 112 aa13.09□□□□□ -0.31
PDX1-201ENST00000381033 C3orf79P0CE67 100 aa13.09□□□□□ -0.31
PDX1-201ENST00000381033 GPHB5Q86YW7 130 aa13.09□□□□□ -0.31
PDX1-201ENST00000381033 ACANP16112 2415 aa13.08□□□□□ -0.32
PDX1-201ENST00000381033 SRD5A1P18405 259 aa13.08□□□□□ -0.32
PDX1-201ENST00000381033 MSRB1Q9NZV6 116 aa13.08□□□□□ -0.32
PDX1-201ENST00000381033 ORM1P02763 201 aa13.08□□□□□ -0.32
PDX1-201ENST00000381033 TMEM78Q5T7P6 136 aa13.08□□□□□ -0.32
PDX1-201ENST00000381033 ATOH7Q8N100 152 aa13.08□□□□□ -0.32
PDX1-201ENST00000381033 MRAPQ8TCY5 172 aa13.08□□□□□ -0.32
PDX1-201ENST00000381033 IGLV1-40P01703 118 aa13.07□□□□□ -0.32
PDX1-201ENST00000381033 LINC00173Q6ZV60 143 aa13.07□□□□□ -0.32
PDX1-201ENST00000381033 C11orf21Q9P2W6 132 aa13.07□□□□□ -0.32
PDX1-201ENST00000381033 M0R2Z0 102 aa13.07□□□□□ -0.32
PDX1-201ENST00000381033 NHLRC4P0CG21 123 aaPredicted RBP13.07□□□□□ -0.32
PDX1-201ENST00000381033 RPL11P62913 178 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms