RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 MRAP2Q96G30 205 aa13.84□□□□□ -0.19
UBL3-201ENST00000380680 IGHV3-64A0A075B6Q5 118 aa13.83□□□□□ -0.2
UBL3-201ENST00000380680 HOXA3O43365 443 aaPredicted RBP13.83□□□□□ -0.2
UBL3-201ENST00000380680 COTL1Q14019 142 aa13.83□□□□□ -0.2
UBL3-201ENST00000380680 SPRY2O43597 315 aa13.83□□□□□ -0.2
UBL3-201ENST00000380680 TEX43Q6ZNM6 134 aa13.83□□□□□ -0.2
UBL3-201ENST00000380680 BCL6BQ8N143 479 aaPredicted RBP13.83□□□□□ -0.2
UBL3-201ENST00000380680 CDH23Q9H251 3354 aa13.83□□□□□ -0.2
UBL3-201ENST00000380680 TMEM101Q96IK0 257 aa13.82□□□□□ -0.2
UBL3-201ENST00000380680 KNCNA6PVL3 124 aa13.82□□□□□ -0.2
UBL3-201ENST00000380680 DLEU1O43261 78 aa13.82□□□□□ -0.2
UBL3-201ENST00000380680 MAJINQ3KP22 176 aa13.82□□□□□ -0.2
UBL3-201ENST00000380680 MSRB1Q9NZV6 116 aa13.82□□□□□ -0.2
UBL3-201ENST00000380680 PRAC2D3DTV9 90 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 CFHR4Q92496 578 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 POLQO75417 2590 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 TRGV1A0A0A0MS02 117 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 TDRG1Q3Y452 100 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 MRPS16Q9Y3D3 137 aaKnown RBP13.81□□□□□ -0.2
UBL3-201ENST00000380680 LINC01549A6NIU2 74 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 H3BUA1 57 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 ZNF415Q09FC8 603 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 Q8N8P6 123 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 TOMM7Q9P0U1 55 aa13.81□□□□□ -0.2
UBL3-201ENST00000380680 ODF3BA8MYP8 253 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 IGLV2-8P01709 118 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 PLNP26678 52 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 AJUBAQ96IF1 538 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 LINC01548A6NM66 108 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 KLF5Q13887 457 aaPredicted RBP13.8□□□□□ -0.2
UBL3-201ENST00000380680 CDSNQ15517 529 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 TRGV4A0A0C4DH28 118 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 IGHV3-53P01767 116 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 ELANEP08246 267 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 C2orf66Q6UXQ4 117 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 XCL2Q9UBD3 114 aa13.8□□□□□ -0.2
UBL3-201ENST00000380680 VPREB3Q9UKI3 123 aa13.79□□□□□ -0.2
UBL3-201ENST00000380680 H3BRM9 83 aa13.79□□□□□ -0.2
UBL3-201ENST00000380680 RPL35AP18077 110 aaKnown RBP13.79□□□□□ -0.2
UBL3-201ENST00000380680 CDKN1BP46527 198 aa13.79□□□□□ -0.2
UBL3-201ENST00000380680 LINC01619G3V211 115 aa13.78□□□□□ -0.2
UBL3-201ENST00000380680 GATA1P15976 413 aaPredicted RBP13.78□□□□□ -0.2
UBL3-201ENST00000380680 HTN3P15516 51 aa13.78□□□□□ -0.2
UBL3-201ENST00000380680 LINC00322Q6ZN03 302 aaPredicted RBP13.78□□□□□ -0.2
UBL3-201ENST00000380680 GNRH2O43555 120 aa13.78□□□□□ -0.2
UBL3-201ENST00000380680 CRYGBP07316 175 aa13.78□□□□□ -0.2
UBL3-201ENST00000380680 IGHV1OR15-1A0A075B7D0 117 aa13.77□□□□□ -0.2
UBL3-201ENST00000380680 INSP01308 110 aa13.77□□□□□ -0.2
UBL3-201ENST00000380680 NEGR1Q7Z3B1 354 aa13.77□□□□□ -0.2
UBL3-201ENST00000380680 FSTL3O95633 263 aa13.77□□□□□ -0.21
UBL3-201ENST00000380680 LINC00173Q6ZV60 143 aa13.77□□□□□ -0.21
UBL3-201ENST00000380680 ZNF747Q9BV97 191 aa13.77□□□□□ -0.21
UBL3-201ENST00000380680 RBAKDNA6NC62 111 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 DEFB136Q30KP8 78 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 EPG5Q9HCE0 2579 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 PRORYQ9H606 182 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 MTORP42345 2549 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 MRPL52Q86TS9 123 aaKnown RBP13.76□□□□□ -0.21
UBL3-201ENST00000380680 SMIM2Q9BVW6 85 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 PRRC2AP48634 2157 aaKnown RBP13.76□□□□□ -0.21
UBL3-201ENST00000380680 TRAV2A0A0B4J234 112 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 A0A1B0GWB2 263 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 SDHAF1A6NFY7 115 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 MRPL53Q96EL3 112 aaKnown RBP13.76□□□□□ -0.21
UBL3-201ENST00000380680 XIRP2A4UGR9 3374 aa13.76□□□□□ -0.21
UBL3-201ENST00000380680 LY6LH3BQJ8 138 aa13.75□□□□□ -0.21
UBL3-201ENST00000380680 HOXD3P31249 432 aaPredicted RBP13.75□□□□□ -0.21
UBL3-201ENST00000380680 RIPPLY3P57055 190 aa13.75□□□□□ -0.21
UBL3-201ENST00000380680 DEFB1P60022 68 aa13.75□□□□□ -0.21
UBL3-201ENST00000380680 PHLDA1Q8WV24 401 aaPredicted RBP13.75□□□□□ -0.21
UBL3-201ENST00000380680 LENEPQ9Y5L5 61 aa13.75□□□□□ -0.21
UBL3-201ENST00000380680 A0A0U1RRA0 63 aa13.75□□□□□ -0.21
UBL3-201ENST00000380680 C19orf71A6NCJ1 209 aa13.75□□□□□ -0.21
UBL3-201ENST00000380680 TP53TG1Q9Y2A0 90 aa13.75□□□□□ -0.21
UBL3-201ENST00000380680 FN1P02751 2386 aaKnown RBP13.75□□□□□ -0.21
UBL3-201ENST00000380680 LGALS9BQ3B8N2 356 aa13.74□□□□□ -0.21
UBL3-201ENST00000380680 LGALS9CQ6DKI2 356 aa13.74□□□□□ -0.21
UBL3-201ENST00000380680 C16orf54Q6UWD8 224 aa13.74□□□□□ -0.21
UBL3-201ENST00000380680 ZNF479Q96JC4 524 aa13.74□□□□□ -0.21
UBL3-201ENST00000380680 ZNF462Q96JM2 2506 aa13.74□□□□□ -0.21
UBL3-201ENST00000380680 C11orf71Q6IPW1 123 aa13.74□□□□□ -0.21
UBL3-201ENST00000380680 RPL36AP83881 106 aaKnown RBP13.74□□□□□ -0.21
UBL3-201ENST00000380680 ZNF124Q15973 351 aa13.74□□□□□ -0.21
UBL3-201ENST00000380680 SAMD5Q5TGI4 173 aa13.74□□□□□ -0.21
UBL3-201ENST00000380680 RPL36ALQ969Q0 106 aaKnown RBP13.74□□□□□ -0.21
UBL3-201ENST00000380680 C1orf159Q96HA4 380 aa13.74□□□□□ -0.21
UBL3-201ENST00000380680 ZNF48Q96MX3 618 aaPredicted RBP13.74□□□□□ -0.21
UBL3-201ENST00000380680 KIR2DL5BA0A0G2JN68 375 aa13.73□□□□□ -0.21
UBL3-201ENST00000380680 KIR2DL5BA0A0G2JPC4 375 aa13.73□□□□□ -0.21
UBL3-201ENST00000380680 KIR2DL5AQ8N109 375 aa13.73□□□□□ -0.21
UBL3-201ENST00000380680 MRPL35Q9NZE8 188 aaKnown RBP13.73□□□□□ -0.21
UBL3-201ENST00000380680 IGHG2P01859 326 aa13.73□□□□□ -0.21
UBL3-201ENST00000380680 UNQ9165/PRO28630Q6UXU0 137 aa13.73□□□□□ -0.21
UBL3-201ENST00000380680 TRBV12-3P01733 135 aa13.73□□□□□ -0.21
UBL3-201ENST00000380680 CMC4P56277 68 aaPredicted RBP13.72□□□□□ -0.21
UBL3-201ENST00000380680 KIR3DS1Q14943 382 aa13.72□□□□□ -0.21
UBL3-201ENST00000380680 DEFB113Q30KQ7 82 aa13.72□□□□□ -0.21
UBL3-201ENST00000380680 TRPT1Q86TN4 253 aaKnown RBP13.72□□□□□ -0.21
UBL3-201ENST00000380680 LURAP1LQ8IV03 231 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms