RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 ZFP36P26651 326 aaKnown RBP12.25□□□□□ -0.45
ARHGEF1-204ENST00000378152 RAB9AP51151 201 aa12.25□□□□□ -0.45
ARHGEF1-204ENST00000378152 CDSNQ15517 529 aa12.25□□□□□ -0.45
ARHGEF1-204ENST00000378152 LCNL1Q6ZST4 164 aa12.25□□□□□ -0.45
ARHGEF1-204ENST00000378152 SLC50A1Q9BRV3 221 aa12.25□□□□□ -0.45
ARHGEF1-204ENST00000378152 CRYBA4P53673 196 aa12.25□□□□□ -0.45
ARHGEF1-204ENST00000378152 CCDC140Q96MF4 163 aa12.25□□□□□ -0.45
ARHGEF1-204ENST00000378152 SRSF1Q07955 248 aaKnown RBP eCLIP12.24□□□□□ -0.455e-7■■■□□ 17.2
ARHGEF1-204ENST00000378152 C8orf86Q6ZUL3 223 aa12.24□□□□□ -0.45
ARHGEF1-204ENST00000378152 SH2D6Q7Z4S9 175 aa12.24□□□□□ -0.45
ARHGEF1-204ENST00000378152 HRNRQ86YZ3 2850 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF1-204ENST00000378152 NBASA2RRP1 2371 aa12.24□□□□□ -0.45
ARHGEF1-204ENST00000378152 IGF1P05019 195 aa12.24□□□□□ -0.45
ARHGEF1-204ENST00000378152 FOXI2Q6ZQN5 318 aa12.24□□□□□ -0.45
ARHGEF1-204ENST00000378152 FAM110DQ8TAY7 271 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF1-204ENST00000378152 A0A1B0GV72 72 aa12.23□□□□□ -0.45
ARHGEF1-204ENST00000378152 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF1-204ENST00000378152 PRR9Q5T870 116 aa12.23□□□□□ -0.45
ARHGEF1-204ENST00000378152 EBI3Q14213 229 aa12.23□□□□□ -0.45
ARHGEF1-204ENST00000378152 TSSC4Q9Y5U2 329 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF1-204ENST00000378152 M0R381 172 aa12.22□□□□□ -0.45
ARHGEF1-204ENST00000378152 ETDBQ3ZM63 59 aa12.22□□□□□ -0.45
ARHGEF1-204ENST00000378152 NCOR2Q9Y618 2525 aa12.22□□□□□ -0.45
ARHGEF1-204ENST00000378152 SPANXB1Q9NS25 103 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF1-204ENST00000378152 METTL26Q96S19 204 aa12.21□□□□□ -0.45
ARHGEF1-204ENST00000378152 PLNP26678 52 aa12.21□□□□□ -0.45
ARHGEF1-204ENST00000378152 C16orf92Q96LL3 132 aa12.21□□□□□ -0.45
ARHGEF1-204ENST00000378152 SCGB3A1Q96QR1 104 aa12.21□□□□□ -0.45
ARHGEF1-204ENST00000378152 HIF1ANQ9NWT6 349 aa12.21□□□□□ -0.45
ARHGEF1-204ENST00000378152 CYSLTR1Q9Y271 337 aa12.21□□□□□ -0.45
ARHGEF1-204ENST00000378152 HLA-DRB4P13762 266 aa12.21□□□□□ -0.46
ARHGEF1-204ENST00000378152 DEFB1P60022 68 aa12.21□□□□□ -0.46
ARHGEF1-204ENST00000378152 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.46
ARHGEF1-204ENST00000378152 SMIM2Q9BVW6 85 aa12.21□□□□□ -0.46
ARHGEF1-204ENST00000378152 MINOS1-NBL1R4GNA1 71 aa12.21□□□□□ -0.46
ARHGEF1-204ENST00000378152 HLA-DRB4X5D2U9 266 aa12.21□□□□□ -0.46
ARHGEF1-204ENST00000378152 SPTA1P02549 2419 aa12.2□□□□□ -0.46
ARHGEF1-204ENST00000378152 H7C1H1 209 aa12.2□□□□□ -0.46
ARHGEF1-204ENST00000378152 RPL39LQ96EH5 51 aaKnown RBP12.2□□□□□ -0.46
ARHGEF1-204ENST00000378152 LINC00527Q9UJ94 153 aa12.2□□□□□ -0.46
ARHGEF1-204ENST00000378152 F8VRH5 84 aa12.2□□□□□ -0.46
ARHGEF1-204ENST00000378152 F8W1H4 67 aa12.2□□□□□ -0.46
ARHGEF1-204ENST00000378152 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
ARHGEF1-204ENST00000378152 OOSP1A8MZH6 123 aa12.19□□□□□ -0.46
ARHGEF1-204ENST00000378152 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
ARHGEF1-204ENST00000378152 OR11H1Q8NG94 326 aa12.19□□□□□ -0.46
ARHGEF1-204ENST00000378152 OR11H2Q8NH07 326 aa12.19□□□□□ -0.46
ARHGEF1-204ENST00000378152 ATP6V0BQ99437 205 aa12.19□□□□□ -0.46
ARHGEF1-204ENST00000378152 CKS1BP61024 79 aa12.19□□□□□ -0.46
ARHGEF1-204ENST00000378152 TAL2Q16559 108 aa12.19□□□□□ -0.46
ARHGEF1-204ENST00000378152 EEF1AKMT3Q96AZ1 226 aa12.19□□□□□ -0.46
ARHGEF1-204ENST00000378152 C20orf173Q96LM9 149 aa12.19□□□□□ -0.46
ARHGEF1-204ENST00000378152 TRBV7-3A0A075B6L6 115 aa12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 MYMXA0A1B0GTQ4 84 aa12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 C9orf47Q6ZRZ4 202 aa12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 SIGMAR1Q99720 223 aa12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 CHD8Q9HCK8 2581 aa12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 GAGE12HA6NDE8 117 aa12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 MGPP08493 103 aa12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 RRN3P1Q2M238 152 aa12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF1-204ENST00000378152 S100A4P26447 101 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 SAA4P35542 130 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 INSL3P51460 131 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 SFTA2Q6UW10 78 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 ITLN2Q8WWU7 325 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 RASL10AQ92737 203 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 SIRPDQ9H106 197 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 SPTBN1Q01082 2364 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 ZFHX3Q15911 3703 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 IGHV4-4A0A075B6R2 117 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 SUMO2P61956 95 aaKnown RBP12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 CD300EQ496F6 205 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 C1orf122Q6ZSJ8 110 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
ARHGEF1-204ENST00000378152 C11orf71Q6IPW1 123 aa12.16□□□□□ -0.46
ARHGEF1-204ENST00000378152 TMEM219Q86XT9 240 aa12.16□□□□□ -0.46
ARHGEF1-204ENST00000378152 AJUBAQ96IF1 538 aa12.16□□□□□ -0.46
ARHGEF1-204ENST00000378152 TRAV12-1A0A0B4J245 112 aa12.15□□□□□ -0.46
ARHGEF1-204ENST00000378152 LGALS1P09382 135 aaKnown RBP12.15□□□□□ -0.46
ARHGEF1-204ENST00000378152 ORMDL2Q53FV1 153 aa12.15□□□□□ -0.46
ARHGEF1-204ENST00000378152 NEXN-AS1Q8NBZ9 246 aa12.15□□□□□ -0.46
ARHGEF1-204ENST00000378152 GLMPQ8WWB7 406 aa12.15□□□□□ -0.46
ARHGEF1-204ENST00000378152 TOMM6Q96B49 74 aa12.15□□□□□ -0.46
ARHGEF1-204ENST00000378152 IGKV3-7A0A075B6H7 116 aa12.15□□□□□ -0.47
ARHGEF1-204ENST00000378152 J3QR89 54 aa12.15□□□□□ -0.47
ARHGEF1-204ENST00000378152 MRPL53Q96EL3 112 aaKnown RBP12.15□□□□□ -0.47
ARHGEF1-204ENST00000378152 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.47
ARHGEF1-204ENST00000378152 ATRXP46100 2492 aa12.14□□□□□ -0.47
ARHGEF1-204ENST00000378152 HOXA3O43365 443 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF1-204ENST00000378152 GNLYP22749 145 aa12.14□□□□□ -0.47
ARHGEF1-204ENST00000378152 ATP5G2Q06055 141 aa12.14□□□□□ -0.47
ARHGEF1-204ENST00000378152 C2orf66Q6UXQ4 117 aa12.14□□□□□ -0.47
ARHGEF1-204ENST00000378152 PGPEP1Q9NXJ5 209 aa12.14□□□□□ -0.47
ARHGEF1-204ENST00000378152 PHLDA3Q9Y5J5 127 aa12.14□□□□□ -0.47
ARHGEF1-204ENST00000378152 TRBV7-1A0A0A6YYK4 115 aa12.14□□□□□ -0.47
ARHGEF1-204ENST00000378152 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
ARHGEF1-204ENST00000378152 BAALCQ8WXS3 180 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms