RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 RIPPLY3P57055 190 aa15.5■□□□□ 0.07
CLN5-201ENST00000377453 ACACBO00763 2458 aa15.5■□□□□ 0.07
CLN5-201ENST00000377453 SPG11Q96JI7 2443 aa15.5■□□□□ 0.07
CLN5-201ENST00000377453 TRBV25-1A0A075B6N4 114 aa15.5■□□□□ 0.07
CLN5-201ENST00000377453 K7EP34 96 aa15.5■□□□□ 0.07
CLN5-201ENST00000377453 UCNP55089 124 aa15.5■□□□□ 0.07
CLN5-201ENST00000377453 GPHB5Q86YW7 130 aa15.49■□□□□ 0.07
CLN5-201ENST00000377453 WFDC12Q8WWY7 111 aa15.49■□□□□ 0.07
CLN5-201ENST00000377453 RPL39LQ96EH5 51 aaKnown RBP15.49■□□□□ 0.07
CLN5-201ENST00000377453 TRAV41A0A0B4J266 112 aa15.49■□□□□ 0.07
CLN5-201ENST00000377453 DPM2O94777 84 aa15.49■□□□□ 0.07
CLN5-201ENST00000377453 SRD5A1P18405 259 aa15.49■□□□□ 0.07
CLN5-201ENST00000377453 SPCS1Q9Y6A9 102 aa15.49■□□□□ 0.07
CLN5-201ENST00000377453 EDN2P20800 178 aa15.48■□□□□ 0.07
CLN5-201ENST00000377453 RAB9AP51151 201 aa15.48■□□□□ 0.07
CLN5-201ENST00000377453 RPL11P62913 178 aaKnown RBP15.48■□□□□ 0.07
CLN5-201ENST00000377453 ZFYVE26Q68DK2 2539 aa15.48■□□□□ 0.07
CLN5-201ENST00000377453 A0A1W2PPM0 123 aa15.48■□□□□ 0.07
CLN5-201ENST00000377453 SIVA1O15304 175 aa15.48■□□□□ 0.07
CLN5-201ENST00000377453 ARL3P36405 182 aa15.48■□□□□ 0.07
CLN5-201ENST00000377453 LAGE3Q14657 143 aa15.48■□□□□ 0.07
CLN5-201ENST00000377453 CACNA1AO00555 2505 aa15.48■□□□□ 0.07
CLN5-201ENST00000377453 TRBV7-1A0A0A6YYK4 115 aa15.47■□□□□ 0.07
CLN5-201ENST00000377453 C9orf47Q6ZRZ4 202 aa15.47■□□□□ 0.07
CLN5-201ENST00000377453 Q6ZS46 218 aa15.47■□□□□ 0.07
CLN5-201ENST00000377453 SMIM15Q7Z3B0 74 aa15.47■□□□□ 0.07
CLN5-201ENST00000377453 NHP2Q9NX24 153 aaKnown RBP15.47■□□□□ 0.07
CLN5-201ENST00000377453 U3KQE9 123 aa15.47■□□□□ 0.07
CLN5-201ENST00000377453 GTF2H5Q6ZYL4 71 aa15.47■□□□□ 0.07
CLN5-201ENST00000377453 C14orf178Q8N769 122 aaPredicted RBP15.47■□□□□ 0.07
CLN5-201ENST00000377453 HIF1ANQ9NWT6 349 aa15.47■□□□□ 0.07
CLN5-201ENST00000377453 NEGR1Q7Z3B1 354 aa15.47■□□□□ 0.07
CLN5-201ENST00000377453 PIFOQ8TCI5 191 aa15.47■□□□□ 0.07
CLN5-201ENST00000377453 MYOZ3Q8TDC0 251 aa15.46■□□□□ 0.07
CLN5-201ENST00000377453 UTP20O75691 2785 aaKnown RBP15.46■□□□□ 0.07
CLN5-201ENST00000377453 GNRH2O43555 120 aa15.45■□□□□ 0.06
CLN5-201ENST00000377453 FLNCQ14315 2725 aa15.45■□□□□ 0.06
CLN5-201ENST00000377453 CRYBG3Q68DQ2 2970 aa15.45■□□□□ 0.06
CLN5-201ENST00000377453 MGPP08493 103 aa15.45■□□□□ 0.06
CLN5-201ENST00000377453 SAMD5Q5TGI4 173 aa15.45■□□□□ 0.06
CLN5-201ENST00000377453 ZFAND2AQ8N6M9 145 aa15.45■□□□□ 0.06
CLN5-201ENST00000377453 NPFFR1Q9GZQ6 430 aa15.45■□□□□ 0.06
CLN5-201ENST00000377453 SMIM13P0DJ93 91 aa15.44■□□□□ 0.06
CLN5-201ENST00000377453 ITLN2Q8WWU7 325 aaPredicted RBP15.44■□□□□ 0.06
CLN5-201ENST00000377453 CSMD2Q7Z408 3487 aa15.44■□□□□ 0.06
CLN5-201ENST00000377453 CELSR2Q9HCU4 2923 aa15.44■□□□□ 0.06
CLN5-201ENST00000377453 RNASE4P34096 147 aaKnown RBP15.44■□□□□ 0.06
CLN5-201ENST00000377453 IGSF10Q6WRI0 2623 aa15.43■□□□□ 0.06
CLN5-201ENST00000377453 ATP5LO75964 103 aa15.43■□□□□ 0.06
CLN5-201ENST00000377453 IGHV4-38-2P0DP08 117 aa15.43■□□□□ 0.06
CLN5-201ENST00000377453 ANXA2RQ3ZCQ2 193 aa15.43■□□□□ 0.06
CLN5-201ENST00000377453 MOB4Q9Y3A3 225 aa15.43■□□□□ 0.06
CLN5-201ENST00000377453 AGRNO00468 2067 aa15.43■□□□□ 0.06
CLN5-201ENST00000377453 IGHV4-39P01824 125 aa15.43■□□□□ 0.06
CLN5-201ENST00000377453 S100A4P26447 101 aaKnown RBP15.43■□□□□ 0.06
CLN5-201ENST00000377453 RASL10AQ92737 203 aa15.43■□□□□ 0.06
CLN5-201ENST00000377453 KLK9Q2XQG4 91 aa15.42■□□□□ 0.06
CLN5-201ENST00000377453 SPOCK3Q9BQ16 436 aa15.42■□□□□ 0.06
CLN5-201ENST00000377453 KLK9Q9UKQ9 250 aa15.42■□□□□ 0.06
CLN5-201ENST00000377453 K7ERU9 68 aa15.42■□□□□ 0.06
CLN5-201ENST00000377453 SMIM2Q9BVW6 85 aa15.42■□□□□ 0.06
CLN5-201ENST00000377453 BLCAPP62952 87 aa15.41■□□□□ 0.06
CLN5-201ENST00000377453 A0A087WX48 190 aa15.41■□□□□ 0.06
CLN5-201ENST00000377453 IGHV4-61A0A0C4DH41 118 aa15.41■□□□□ 0.06
CLN5-201ENST00000377453 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLN5-201ENST00000377453 FABP2P12104 132 aa15.4■□□□□ 0.06
CLN5-201ENST00000377453 SRSF1Q07955 248 aaKnown RBP eCLIP15.4■□□□□ 0.06
CLN5-201ENST00000377453 C19orf54Q5BKX5 351 aa15.4■□□□□ 0.06
CLN5-201ENST00000377453 MTURNQ8N3F0 131 aa15.4■□□□□ 0.06
CLN5-201ENST00000377453 PHLDA1Q8WV24 401 aaPredicted RBP15.4■□□□□ 0.06
CLN5-201ENST00000377453 CEND1Q8N111 149 aa15.4■□□□□ 0.06
CLN5-201ENST00000377453 MRPL53Q96EL3 112 aaKnown RBP15.4■□□□□ 0.06
CLN5-201ENST00000377453 C9orf139Q6ZV77 190 aa15.39■□□□□ 0.05
CLN5-201ENST00000377453 JPT2Q9H910 190 aa15.39■□□□□ 0.05
CLN5-201ENST00000377453 PF4V1P10720 104 aa15.39■□□□□ 0.05
CLN5-201ENST00000377453 PHLDA3Q9Y5J5 127 aa15.39■□□□□ 0.05
CLN5-201ENST00000377453 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.38■□□□□ 0.05
CLN5-201ENST00000377453 OR10J6PQ8NGY7 276 aa15.38■□□□□ 0.05
CLN5-201ENST00000377453 SCGB3A1Q96QR1 104 aa15.38■□□□□ 0.05
CLN5-201ENST00000377453 HIGD1BQ9P298 99 aa15.38■□□□□ 0.05
CLN5-201ENST00000377453 IGHV4-4A0A075B6R2 117 aa15.38■□□□□ 0.05
CLN5-201ENST00000377453 RNF223E7ERA6 249 aa15.38■□□□□ 0.05
CLN5-201ENST00000377453 SOCS3O14543 225 aa15.38■□□□□ 0.05
CLN5-201ENST00000377453 EMP1P54849 157 aa15.38■□□□□ 0.05
CLN5-201ENST00000377453 SUMO2P61956 95 aaKnown RBP15.38■□□□□ 0.05
CLN5-201ENST00000377453 TMEM95Q3KNT9 176 aa15.38■□□□□ 0.05
CLN5-201ENST00000377453 IGHV1-69DA0A0B4J2H0 117 aa15.37■□□□□ 0.05
CLN5-201ENST00000377453 H3BUX3 64 aa15.37■□□□□ 0.05
CLN5-201ENST00000377453 IGHV1-69P01742 117 aa15.37■□□□□ 0.05
CLN5-201ENST00000377453 COTL1Q14019 142 aa15.37■□□□□ 0.05
CLN5-201ENST00000377453 GNLYP22749 145 aa15.37■□□□□ 0.05
CLN5-201ENST00000377453 CSPG4Q6UVK1 2322 aa15.37■□□□□ 0.05
CLN5-201ENST00000377453 SMPXQ9UHP9 88 aa15.36■□□□□ 0.05
CLN5-201ENST00000377453 ASIPP42127 132 aa15.36■□□□□ 0.05
CLN5-201ENST00000377453 RPL24P83731 157 aaKnown RBP15.36■□□□□ 0.05
CLN5-201ENST00000377453 AMTNQ6UX39 209 aa15.36■□□□□ 0.05
CLN5-201ENST00000377453 FAM223BA6NKX1 122 aa15.35■□□□□ 0.05
CLN5-201ENST00000377453 FAM223AQ8IWN6 122 aa15.35■□□□□ 0.05
CLN5-201ENST00000377453 CHTOPQ9Y3Y2 248 aaKnown RBP15.35■□□□□ 0.05
CLN5-201ENST00000377453 TRAV21A0A0B4J279 112 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms