RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CFAP46Q8IYW2 2715 aa9.91□□□□□ -0.82
USP11-204ENST00000377107 TRBV7-1A0A0A6YYK4 115 aa9.91□□□□□ -0.82
USP11-204ENST00000377107 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
USP11-204ENST00000377107 TMEM8BA6NDV4 472 aa9.91□□□□□ -0.82
USP11-204ENST00000377107 CLEC2AQ6UVW9 174 aa9.91□□□□□ -0.82
USP11-204ENST00000377107 CUBNO60494 3623 aa9.91□□□□□ -0.82
USP11-204ENST00000377107 ITPR1Q14643 2758 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 A6NDN8 102 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 GNRH2O43555 120 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 PRR9Q5T870 116 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 FAM74A4Q5TZK3 123 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 C20orf173Q96LM9 149 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 ZNF48Q96MX3 618 aaPredicted RBP9.9□□□□□ -0.82
USP11-204ENST00000377107 PEF1Q9UBV8 284 aaKnown RBP9.9□□□□□ -0.82
USP11-204ENST00000377107 ZNF462Q96JM2 2506 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 NACAE9PAV3 2078 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 IGKV2D-26A0A0A0MRZ7 120 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 EMP1P54849 157 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 LGALS9BQ3B8N2 356 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 LGALS9CQ6DKI2 356 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 DUX5Q96PT3 197 aa9.9□□□□□ -0.82
USP11-204ENST00000377107 NXT2Q9NPJ8 142 aaKnown RBP9.9□□□□□ -0.82
USP11-204ENST00000377107 OR4X2Q8NGF9 303 aa9.9□□□□□ -0.83
USP11-204ENST00000377107 PIMREGQ9BSJ6 248 aa9.9□□□□□ -0.83
USP11-204ENST00000377107 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.83
USP11-204ENST00000377107 ZANQ9Y493 2812 aa9.89□□□□□ -0.83
USP11-204ENST00000377107 IGHV1-69DA0A0B4J2H0 117 aa9.89□□□□□ -0.83
USP11-204ENST00000377107 K7ERJ3 54 aa9.89□□□□□ -0.83
USP11-204ENST00000377107 CD5LO43866 347 aa9.89□□□□□ -0.83
USP11-204ENST00000377107 IGHV1-69P01742 117 aa9.89□□□□□ -0.83
USP11-204ENST00000377107 PPBPP02775 128 aa9.89□□□□□ -0.83
USP11-204ENST00000377107 EDN2P20800 178 aa9.89□□□□□ -0.83
USP11-204ENST00000377107 IGKCP01834 107 aa9.89□□□□□ -0.83
USP11-204ENST00000377107 ABCA2Q9BZC7 2435 aa9.89□□□□□ -0.83
USP11-204ENST00000377107 RPL39LQ96EH5 51 aaKnown RBP9.89□□□□□ -0.83
USP11-204ENST00000377107 GAGE12BA1L429 117 aa9.88□□□□□ -0.83
USP11-204ENST00000377107 ANXA2RQ3ZCQ2 193 aa9.88□□□□□ -0.83
USP11-204ENST00000377107 RHPN1-AS1Q9BWJ2 59 aa9.88□□□□□ -0.83
USP11-204ENST00000377107 NHP2Q9NX24 153 aaKnown RBP9.88□□□□□ -0.83
USP11-204ENST00000377107 ZFHX3Q15911 3703 aa9.88□□□□□ -0.83
USP11-204ENST00000377107 SFTA2Q6UW10 78 aa9.88□□□□□ -0.83
USP11-204ENST00000377107 AJUBAQ96IF1 538 aa9.88□□□□□ -0.83
USP11-204ENST00000377107 NPFFR1Q9GZQ6 430 aa9.88□□□□□ -0.83
USP11-204ENST00000377107 IGHV4-30-2A0A087WSY4 118 aa9.87□□□□□ -0.83
USP11-204ENST00000377107 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
USP11-204ENST00000377107 CELSR2Q9HCU4 2923 aa9.87□□□□□ -0.83
USP11-204ENST00000377107 ANKRD17O75179 2603 aaKnown RBP9.87□□□□□ -0.83
USP11-204ENST00000377107 LAGE3Q14657 143 aa9.87□□□□□ -0.83
USP11-204ENST00000377107 U3KQK5 164 aa9.87□□□□□ -0.83
USP11-204ENST00000377107 DOPEY1Q5JWR5 2465 aa9.87□□□□□ -0.83
USP11-204ENST00000377107 A0A087WWL8 130 aa9.87□□□□□ -0.83
USP11-204ENST00000377107 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
USP11-204ENST00000377107 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
USP11-204ENST00000377107 A0A0G2JLM5 398 aa9.86□□□□□ -0.83
USP11-204ENST00000377107 DPM2O94777 84 aa9.86□□□□□ -0.83
USP11-204ENST00000377107 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
USP11-204ENST00000377107 ASIPP42127 132 aa9.86□□□□□ -0.83
USP11-204ENST00000377107 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
USP11-204ENST00000377107 AGRNO00468 2067 aa9.86□□□□□ -0.83
USP11-204ENST00000377107 TRAV12-3A0A0B4J271 114 aa9.86□□□□□ -0.83
USP11-204ENST00000377107 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
USP11-204ENST00000377107 VPS13CQ709C8 3753 aa9.86□□□□□ -0.83
USP11-204ENST00000377107 ODF1Q14990 250 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 KHDC1LQ5JSQ8 128 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 JPT2Q9H910 190 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 TRAV12-2A0A075B6T6 113 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.85□□□□□ -0.83
USP11-204ENST00000377107 HSD52Q0P140 79 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 MTURNQ8N3F0 131 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 Q8N8P6 123 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 EPG5Q9HCE0 2579 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 SFTPCP11686 197 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 SEC11AP67812 179 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 SRSF1Q07955 248 aaKnown RBP eCLIP9.85□□□□□ -0.83
USP11-204ENST00000377107 C9orf139Q6ZV77 190 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 BOD1L2Q8IYS8 172 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 HIST1H4GQ99525 98 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 SPCS1Q9Y6A9 102 aa9.85□□□□□ -0.83
USP11-204ENST00000377107 TRAV21A0A0B4J279 112 aa9.84□□□□□ -0.83
USP11-204ENST00000377107 CD7P09564 240 aa9.84□□□□□ -0.83
USP11-204ENST00000377107 FXYD2P54710 66 aa9.84□□□□□ -0.83
USP11-204ENST00000377107 HIST2H2BDQ6DRA6 164 aa9.84□□□□□ -0.83
USP11-204ENST00000377107 GTF2H5Q6ZYL4 71 aa9.84□□□□□ -0.83
USP11-204ENST00000377107 DPF1Q92782 380 aa9.84□□□□□ -0.83
USP11-204ENST00000377107 SAP30O75446 220 aa9.84□□□□□ -0.83
USP11-204ENST00000377107 FGF6P10767 208 aa9.84□□□□□ -0.83
USP11-204ENST00000377107 ZNF575Q86XF7 245 aa9.84□□□□□ -0.83
USP11-204ENST00000377107 IGHV7-4-1A0A0J9YVY3 117 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 ATP5LO75964 103 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 RIPPLY3P57055 190 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 OR1N2Q8NGR9 330 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 CHAC1Q9BUX1 264 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 PSMG4Q5JS54 123 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 FAM159AQ6UWV7 190 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 GATD1Q8NB37 220 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 JMJD8Q96S16 334 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 ZNF256Q9Y2P7 627 aaPredicted RBP9.83□□□□□ -0.84
USP11-204ENST00000377107 NOTCH2Q04721 2471 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 SMIM13P0DJ93 91 aa9.83□□□□□ -0.84
USP11-204ENST00000377107 OR9G4Q8NGQ1 327 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms