RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 FAM229AH3BQW9 127 aa15.63■□□□□ 0.09
C9orf47-202ENST00000375850 PFN1P07737 140 aaKnown RBP15.63■□□□□ 0.09
C9orf47-202ENST00000375850 PPT1P50897 306 aa15.63■□□□□ 0.09
C9orf47-202ENST00000375850 LINC01556Q5JQF7 62 aa15.63■□□□□ 0.09
C9orf47-202ENST00000375850 NHLRC2Q8NBF2 726 aa15.63■□□□□ 0.09
C9orf47-202ENST00000375850 HYLS1Q96M11 299 aa15.63■□□□□ 0.09
C9orf47-202ENST00000375850 SDF2L1Q9HCN8 221 aa15.63■□□□□ 0.09
C9orf47-202ENST00000375850 HERC1Q15751 4861 aa15.62■□□□□ 0.09
C9orf47-202ENST00000375850 GATA1P15976 413 aaPredicted RBP15.62■□□□□ 0.09
C9orf47-202ENST00000375850 PQLC2Q6ZP29 291 aa15.62■□□□□ 0.09
C9orf47-202ENST00000375850 PPP1R1CQ8WVI7 109 aa15.62■□□□□ 0.09
C9orf47-202ENST00000375850 HSPB11Q9Y547 144 aa15.62■□□□□ 0.09
C9orf47-202ENST00000375850 IGLV5-52A0A0A0MRZ9 124 aa15.61■□□□□ 0.09
C9orf47-202ENST00000375850 TRAV8-6A0A0B4J262 113 aa15.61■□□□□ 0.09
C9orf47-202ENST00000375850 PGPA6NDG6 321 aa15.61■□□□□ 0.09
C9orf47-202ENST00000375850 MBD2Q9UBB5 411 aa15.61■□□□□ 0.09
C9orf47-202ENST00000375850 IBA57-AS1B1ANH7 110 aa15.6■□□□□ 0.09
C9orf47-202ENST00000375850 GNRH2O43555 120 aa15.6■□□□□ 0.09
C9orf47-202ENST00000375850 TREM1Q9NP99 234 aa15.6■□□□□ 0.09
C9orf47-202ENST00000375850 SERTM2A0A1B0GWG4 89 aa15.59■□□□□ 0.09
C9orf47-202ENST00000375850 FBLL1A6NHQ2 334 aaKnown RBP15.59■□□□□ 0.09
C9orf47-202ENST00000375850 TYMSP04818 313 aa15.59■□□□□ 0.09
C9orf47-202ENST00000375850 ACOT6Q3I5F7 207 aaPredicted RBP15.59■□□□□ 0.09
C9orf47-202ENST00000375850 GOLT1AQ6ZVE7 132 aa15.59■□□□□ 0.09
C9orf47-202ENST00000375850 PRADC1Q9BSG0 188 aa15.59■□□□□ 0.09
C9orf47-202ENST00000375850 A0A1W2PPV4 95 aa15.58■□□□□ 0.08
C9orf47-202ENST00000375850 LRCOL1A6NCL2 159 aa15.58■□□□□ 0.08
C9orf47-202ENST00000375850 ASB13Q8WXK3 278 aa15.58■□□□□ 0.08
C9orf47-202ENST00000375850 NDFIP1Q9BT67 221 aa15.58■□□□□ 0.08
C9orf47-202ENST00000375850 RPH3ALQ9UNE2 315 aa15.58■□□□□ 0.08
C9orf47-202ENST00000375850 FAT1Q14517 4588 aa15.58■□□□□ 0.08
C9orf47-202ENST00000375850 LOC100131303A0A0U1RQF7 123 aa15.57■□□□□ 0.08
C9orf47-202ENST00000375850 TRBV6-4A0A1B0GX49 114 aa15.57■□□□□ 0.08
C9orf47-202ENST00000375850 MPC2O95563 127 aa15.57■□□□□ 0.08
C9orf47-202ENST00000375850 RPL12P30050 165 aaKnown RBP15.57■□□□□ 0.08
C9orf47-202ENST00000375850 H2BFSP57053 126 aa15.57■□□□□ 0.08
C9orf47-202ENST00000375850 RHOHQ15669 191 aa15.57■□□□□ 0.08
C9orf47-202ENST00000375850 SH3BGRL3Q9H299 93 aa15.57■□□□□ 0.08
C9orf47-202ENST00000375850 INMT-MINDY4F8WBC2 141 aa15.56■□□□□ 0.08
C9orf47-202ENST00000375850 Q6ZSN1 163 aa15.56■□□□□ 0.08
C9orf47-202ENST00000375850 F6UZH7 168 aa15.55■□□□□ 0.08
C9orf47-202ENST00000375850 UPK1BO75841 260 aa15.55■□□□□ 0.08
C9orf47-202ENST00000375850 C1QBP02746 253 aa15.55■□□□□ 0.08
C9orf47-202ENST00000375850 SMR3BP02814 79 aaPredicted RBP15.55■□□□□ 0.08
C9orf47-202ENST00000375850 ZNF876PQ49A33 203 aa15.55■□□□□ 0.08
C9orf47-202ENST00000375850 OR10J3Q5JRS4 329 aa15.55■□□□□ 0.08
C9orf47-202ENST00000375850 Q8N814 137 aa15.55■□□□□ 0.08
C9orf47-202ENST00000375850 SLC25A29Q8N8R3 303 aa15.55■□□□□ 0.08
C9orf47-202ENST00000375850 LAGE3Q14657 143 aa15.54■□□□□ 0.08
C9orf47-202ENST00000375850 LELP1Q5T871 98 aa15.54■□□□□ 0.08
C9orf47-202ENST00000375850 PTH2Q96A98 100 aa15.54■□□□□ 0.08
C9orf47-202ENST00000375850 TVP23CQ96ET8 276 aa15.54■□□□□ 0.08
C9orf47-202ENST00000375850 SMIM3Q9BZL3 60 aa15.54■□□□□ 0.08
C9orf47-202ENST00000375850 K7EQM0 130 aa15.53■□□□□ 0.08
C9orf47-202ENST00000375850 TAAR5O14804 337 aa15.53■□□□□ 0.08
C9orf47-202ENST00000375850 RS1O15537 224 aa15.53■□□□□ 0.08
C9orf47-202ENST00000375850 MARVELD1Q9BSK0 173 aa15.53■□□□□ 0.08
C9orf47-202ENST00000375850 TM2D2Q9BX73 214 aa15.53■□□□□ 0.08
C9orf47-202ENST00000375850 TRAV8-1A0A0A6YYK1 113 aa15.52■□□□□ 0.08
C9orf47-202ENST00000375850 CFAP126Q5VTH2 177 aa15.52■□□□□ 0.08
C9orf47-202ENST00000375850 SSNA1O43805 119 aa15.51■□□□□ 0.07
C9orf47-202ENST00000375850 MGST1P10620 155 aaKnown RBP15.51■□□□□ 0.07
C9orf47-202ENST00000375850 C5orf17Q8NAS9 161 aa15.51■□□□□ 0.07
C9orf47-202ENST00000375850 GTSF1LQ9H1H1 148 aa15.51■□□□□ 0.07
C9orf47-202ENST00000375850 Q9HAA7 133 aa15.51■□□□□ 0.07
C9orf47-202ENST00000375850 OR10G9Q8NGN4 311 aa15.5■□□□□ 0.07
C9orf47-202ENST00000375850 OR10G7Q8NGN6 311 aa15.5■□□□□ 0.07
C9orf47-202ENST00000375850 VPS13BQ7Z7G8 4022 aa15.49■□□□□ 0.07
C9orf47-202ENST00000375850 GNG5P63218 68 aa15.49■□□□□ 0.07
C9orf47-202ENST00000375850 ZFP69Q49AA0 526 aa15.49■□□□□ 0.07
C9orf47-202ENST00000375850 ATP6V0E2Q8NHE4 81 aa15.49■□□□□ 0.07
C9orf47-202ENST00000375850 C9orf85Q96MD7 179 aa15.49■□□□□ 0.07
C9orf47-202ENST00000375850 EIF3GO75821 320 aaKnown RBP eCLIP15.48■□□□□ 0.07
C9orf47-202ENST00000375850 TCRAP04437 139 aa15.48■□□□□ 0.07
C9orf47-202ENST00000375850 RAB2AP61019 212 aa15.48■□□□□ 0.07
C9orf47-202ENST00000375850 SRRM2Q9UQ35 2752 aaKnown RBP15.47■□□□□ 0.07
C9orf47-202ENST00000375850 PIK3CD-AS1Q5SR53 167 aa15.47■□□□□ 0.07
C9orf47-202ENST00000375850 WFDC1Q9HC57 220 aa15.47■□□□□ 0.07
C9orf47-202ENST00000375850 TRAV8-3A0A0A6YYJ7 113 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 GCGP01275 180 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 IGHV3-30P01768 117 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 IGHV3-33P01772 117 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 STAG3L2P0CL84 134 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 STAG3L3P0CL85 134 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 ARL14EPLP0DKL9 152 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 IGHV3-30-3P0DP02 117 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 IGHV3-30-5P0DP03 117 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 CDC34P49427 236 aaPredicted RBP15.46■□□□□ 0.07
C9orf47-202ENST00000375850 SMUG1Q53HV7 270 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 TOR2AQ5JU69 321 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 DPPA3Q6W0C5 159 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 OR2G3Q8NGZ4 309 aa15.46■□□□□ 0.07
C9orf47-202ENST00000375850 MYCBP2O75592 4640 aa15.45■□□□□ 0.06
C9orf47-202ENST00000375850 DEFA1P59665 94 aa15.45■□□□□ 0.06
C9orf47-202ENST00000375850 DEFA3P59666 94 aa15.45■□□□□ 0.06
C9orf47-202ENST00000375850 ZNF506Q5JVG8 444 aa15.45■□□□□ 0.06
C9orf47-202ENST00000375850 SAPCD1Q5SSQ6 148 aa15.45■□□□□ 0.06
C9orf47-202ENST00000375850 ZFP2Q6ZN57 461 aa15.45■□□□□ 0.06
C9orf47-202ENST00000375850 SUN5Q8TC36 379 aa15.45■□□□□ 0.06
C9orf47-202ENST00000375850 C11orf21Q9P2W6 132 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms