RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 K7EP34 96 aa9.03□□□□□ -0.96
PTPRF-203ENST00000372407 FGF6P10767 208 aa9.03□□□□□ -0.96
PTPRF-203ENST00000372407 Q6ZSR3 168 aa9.03□□□□□ -0.96
PTPRF-203ENST00000372407 ZNRF2Q8NHG8 242 aa9.03□□□□□ -0.96
PTPRF-203ENST00000372407 UBE2WQ96B02 151 aa9.03□□□□□ -0.96
PTPRF-203ENST00000372407 C22orf46C9J442 243 aa9.03□□□□□ -0.96
PTPRF-203ENST00000372407 COL4A3Q01955 1670 aa9.02□□□□□ -0.96
PTPRF-203ENST00000372407 TRAV12-2A0A075B6T6 113 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 SIVA1O15304 175 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 MYO9AB2RTY4 2548 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 SRSF2Q01130 221 aaKnown RBP9.02□□□□□ -0.97
PTPRF-203ENST00000372407 FAM120AOSQ5T036 256 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 AGPAT4-IT1Q9H0P7 198 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 NCOA6Q14686 2063 aaPredicted RBP9.02□□□□□ -0.97
PTPRF-203ENST00000372407 A0A1W2PPM0 123 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 J3QQQ9 107 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 ASPHD1Q5U4P2 390 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 TMEM243Q9BU79 118 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 FGF23Q9GZV9 251 aaPredicted RBP9.02□□□□□ -0.97
PTPRF-203ENST00000372407 EDA2RQ9HAV5 297 aa9.02□□□□□ -0.97
PTPRF-203ENST00000372407 TSSC4Q9Y5U2 329 aaPredicted RBP9.02□□□□□ -0.97
PTPRF-203ENST00000372407 SOCS3O14543 225 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 AZU1P20160 251 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 PFN2P35080 140 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 C17orf77Q96MU5 243 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 PRR14LQ5THK1 2151 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 IGHV7-4-1A0A0J9YVY3 117 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 F8WEM9 126 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 CTSZQ9UBR2 303 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 MORN5Q5VZ52 161 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 ADAMTS9Q9P2N4 1935 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 OBSL1O75147 1896 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 KLF5Q13887 457 aaPredicted RBP9.01□□□□□ -0.97
PTPRF-203ENST00000372407 SP5Q6BEB4 398 aaPredicted RBP9.01□□□□□ -0.97
PTPRF-203ENST00000372407 ZNF493Q6ZR52 646 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 MAPK1IP1LQ8NDC0 245 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 DKK2Q9UBU2 259 aa9.01□□□□□ -0.97
PTPRF-203ENST00000372407 ELANEP08246 267 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
PTPRF-203ENST00000372407 ATP6V0BQ99437 205 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 UBE2DNLQ8IWF7 75 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 CEND1Q8N111 149 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 HIVEP2P31629 2446 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 KIR2DL5BA0A0G2JN68 375 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 KIR2DL5BA0A0G2JPC4 375 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 K7EMI3 77 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 GAGE7O76087 117 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 GAGE12FP0CL80 117 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 GAGE12GP0CL81 117 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 GAGE12IP0CL82 117 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 HLA-DMBP28068 263 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 CR1LQ2VPA4 569 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 KIR2DL5AQ8N109 375 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 DYNAPQ8N1N2 210 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 CCDC168Q8NDH2 2452 aa9□□□□□ -0.97
PTPRF-203ENST00000372407 PLXNB1O43157 2135 aa8.99□□□□□ -0.97
PTPRF-203ENST00000372407 H3BMG7 143 aa8.99□□□□□ -0.97
PTPRF-203ENST00000372407 KLF2Q9Y5W3 355 aaPredicted RBP8.99□□□□□ -0.97
PTPRF-203ENST00000372407 IGHV3-38A0A0C4DH36 116 aa8.99□□□□□ -0.97
PTPRF-203ENST00000372407 A0A1W2PNU3 283 aaPredicted RBP8.99□□□□□ -0.97
PTPRF-203ENST00000372407 J3QLI3 93 aa8.99□□□□□ -0.97
PTPRF-203ENST00000372407 CFHR3Q02985 330 aa8.99□□□□□ -0.97
PTPRF-203ENST00000372407 PRSS29PA6NIE9 313 aa8.99□□□□□ -0.97
PTPRF-203ENST00000372407 MRPL53Q96EL3 112 aaKnown RBP8.99□□□□□ -0.97
PTPRF-203ENST00000372407 F5H768 121 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 H3BUA1 57 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 IGKV1-17P01599 117 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 DAD1P61803 113 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 DKK4Q9UBT3 224 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 LHBP01229 141 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 PRB1P04280 392 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 ZNF561-AS1K7EIQ3 104 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 MAJINQ3KP22 176 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 AMTNQ6UX39 209 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 PLA2G2EQ9NZK7 142 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 DEFB121Q5J5C9 76 aa8.98□□□□□ -0.97
PTPRF-203ENST00000372407 PSCAO43653 123 aa8.97□□□□□ -0.97
PTPRF-203ENST00000372407 C12orf74Q32Q52 190 aa8.97□□□□□ -0.97
PTPRF-203ENST00000372407 RBAKDNA6NC62 111 aa8.97□□□□□ -0.97
PTPRF-203ENST00000372407 GAGE6Q13070 117 aa8.97□□□□□ -0.97
PTPRF-203ENST00000372407 CDPF1Q6NVV7 123 aa8.97□□□□□ -0.97
PTPRF-203ENST00000372407 SLX1AQ9BQ83 275 aa8.97□□□□□ -0.97
PTPRF-203ENST00000372407 HERVK_113P63121 156 aa8.97□□□□□ -0.97
PTPRF-203ENST00000372407 C9orf153Q5TBE3 101 aa8.97□□□□□ -0.97
PTPRF-203ENST00000372407 SHISA9B4DS77 424 aa8.96□□□□□ -0.97
PTPRF-203ENST00000372407 NXPH4O95158 308 aa8.96□□□□□ -0.97
PTPRF-203ENST00000372407 KRTAP27-1Q3LI81 207 aa8.96□□□□□ -0.97
PTPRF-203ENST00000372407 UTF1Q5T230 341 aa8.96□□□□□ -0.97
PTPRF-203ENST00000372407 F6UB75 175 aa8.96□□□□□ -0.97
PTPRF-203ENST00000372407 FOXE3Q13461 319 aa8.96□□□□□ -0.97
PTPRF-203ENST00000372407 RHOHQ15669 191 aa8.96□□□□□ -0.97
PTPRF-203ENST00000372407 DEFB125Q8N687 156 aa8.96□□□□□ -0.97
PTPRF-203ENST00000372407 UBL5Q9BZL1 73 aa8.96□□□□□ -0.97
PTPRF-203ENST00000372407 K7ERJ3 54 aa8.96□□□□□ -0.98
PTPRF-203ENST00000372407 GP9P14770 177 aa8.96□□□□□ -0.98
PTPRF-203ENST00000372407 GAGE12HA6NDE8 117 aa8.96□□□□□ -0.98
PTPRF-203ENST00000372407 K7EIM0 57 aa8.96□□□□□ -0.98
PTPRF-203ENST00000372407 PCP2Q8IVA1 136 aa8.96□□□□□ -0.98
PTPRF-203ENST00000372407 SPRY4Q9C004 299 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms