RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 GNRH2O43555 120 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 GCGP01275 180 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 CCL20P78556 96 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 ZNF415Q09FC8 603 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 SAPCD1Q5SSQ6 148 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 Q86TA4 180 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 TRAV1-1A0A0B4J248 108 aa15.74■□□□□ 0.11
ECHDC1-203ENST00000368291 HOXA5P20719 270 aa15.74■□□□□ 0.11
ECHDC1-203ENST00000368291 SMUG1Q53HV7 270 aa15.74■□□□□ 0.11
ECHDC1-203ENST00000368291 TCEAL7Q9BRU2 100 aa15.74■□□□□ 0.11
ECHDC1-203ENST00000368291 NACAE9PAV3 2078 aa15.73■□□□□ 0.11
ECHDC1-203ENST00000368291 TRGV11A0A075B6L2 103 aa15.73■□□□□ 0.11
ECHDC1-203ENST00000368291 TYMSP04818 313 aa15.73■□□□□ 0.11
ECHDC1-203ENST00000368291 PPT1P50897 306 aa15.73■□□□□ 0.11
ECHDC1-203ENST00000368291 MRPL16Q9NX20 251 aaKnown RBP15.73■□□□□ 0.11
ECHDC1-203ENST00000368291 IGHV3-16A0A0C4DH30 117 aa15.72■□□□□ 0.11
ECHDC1-203ENST00000368291 PFN1P07737 140 aaKnown RBP15.72■□□□□ 0.11
ECHDC1-203ENST00000368291 LGALS9BQ3B8N2 356 aa15.72■□□□□ 0.11
ECHDC1-203ENST00000368291 NKX2-5P52952 324 aaPredicted RBP15.71■□□□□ 0.11
ECHDC1-203ENST00000368291 C15orf53Q8NAA6 179 aa15.71■□□□□ 0.11
ECHDC1-203ENST00000368291 TRGV2A0A075B6R0 118 aa15.7■□□□□ 0.1
ECHDC1-203ENST00000368291 FMC1Q96HJ9 113 aa15.7■□□□□ 0.1
ECHDC1-203ENST00000368291 KCNS1Q96KK3 526 aa15.7■□□□□ 0.1
ECHDC1-203ENST00000368291 SDF2L1Q9HCN8 221 aa15.7■□□□□ 0.1
ECHDC1-203ENST00000368291 TRBV6-1A0A0K0K1D8 114 aa15.69■□□□□ 0.1
ECHDC1-203ENST00000368291 SCO2A0A1W2PP80 73 aa15.69■□□□□ 0.1
ECHDC1-203ENST00000368291 P0DMU3 169 aa15.69■□□□□ 0.1
ECHDC1-203ENST00000368291 FAM231AP0DMU4 169 aa15.69■□□□□ 0.1
ECHDC1-203ENST00000368291 FAM231CP0DMU5 169 aa15.69■□□□□ 0.1
ECHDC1-203ENST00000368291 OR5I1Q13606 314 aa15.69■□□□□ 0.1
ECHDC1-203ENST00000368291 COX8CQ7Z4L0 72 aa15.69■□□□□ 0.1
ECHDC1-203ENST00000368291 SPXQ9BT56 116 aa15.69■□□□□ 0.1
ECHDC1-203ENST00000368291 CRIP1P50238 77 aa15.68■□□□□ 0.1
ECHDC1-203ENST00000368291 ZFP30Q9Y2G7 519 aa15.68■□□□□ 0.1
ECHDC1-203ENST00000368291 LTAP01374 205 aa15.67■□□□□ 0.1
ECHDC1-203ENST00000368291 AKR1C3P42330 323 aa15.67■□□□□ 0.1
ECHDC1-203ENST00000368291 UBE2G1P62253 170 aa15.67■□□□□ 0.1
ECHDC1-203ENST00000368291 POM121L12Q8N7R1 296 aa15.67■□□□□ 0.1
ECHDC1-203ENST00000368291 RASL10AQ92737 203 aa15.67■□□□□ 0.1
ECHDC1-203ENST00000368291 ZC2HC1AQ96GY0 325 aa15.67■□□□□ 0.1
ECHDC1-203ENST00000368291 MANBALQ9NQG1 85 aa15.67■□□□□ 0.1
ECHDC1-203ENST00000368291 GNG13Q9P2W3 67 aa15.67■□□□□ 0.1
ECHDC1-203ENST00000368291 BOLA1Q9Y3E2 137 aa15.67■□□□□ 0.1
ECHDC1-203ENST00000368291 TRAV26-1A0A087WT03 109 aa15.66■□□□□ 0.1
ECHDC1-203ENST00000368291 IGKV3D-20A0A0C4DH25 116 aa15.66■□□□□ 0.1
ECHDC1-203ENST00000368291 FABP5P3A8MUU1 101 aa15.65■□□□□ 0.1
ECHDC1-203ENST00000368291 A0A0J9YY99 117 aa15.64■□□□□ 0.09
ECHDC1-203ENST00000368291 NUDT3O95989 172 aa15.64■□□□□ 0.09
ECHDC1-203ENST00000368291 IGHV3-53P01767 116 aa15.64■□□□□ 0.09
ECHDC1-203ENST00000368291 ALKAL2Q6UX46 152 aa15.64■□□□□ 0.09
ECHDC1-203ENST00000368291 VSIG2Q96IQ7 327 aa15.64■□□□□ 0.09
ECHDC1-203ENST00000368291 TEX46H3BTG2 121 aa15.63■□□□□ 0.09
ECHDC1-203ENST00000368291 M0R2P5 195 aa15.63■□□□□ 0.09
ECHDC1-203ENST00000368291 RNASE3P12724 160 aaKnown RBP15.63■□□□□ 0.09
ECHDC1-203ENST00000368291 C9orf85Q96MD7 179 aa15.63■□□□□ 0.09
ECHDC1-203ENST00000368291 H3BNG1 76 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 FHL2Q14192 279 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 SH2D1AO60880 128 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 S100A9P06702 114 aaKnown RBP15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 SFTA3P0C7M3 94 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 ZNF674Q2M3X9 581 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 RNF212Q495C1 297 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 ZNF575Q86XF7 245 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 NHLRC2Q8NBF2 726 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 C11orf52Q96A22 123 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 ZNF479Q96JC4 524 aa15.62■□□□□ 0.09
ECHDC1-203ENST00000368291 MLST8Q9BVC4 326 aa15.61■□□□□ 0.09
ECHDC1-203ENST00000368291 FAM162BQ5T6X4 162 aa15.6■□□□□ 0.09
ECHDC1-203ENST00000368291 UBE2DNLQ8IWF7 75 aa15.6■□□□□ 0.09
ECHDC1-203ENST00000368291 TXNDC17Q9BRA2 123 aa15.6■□□□□ 0.09
ECHDC1-203ENST00000368291 DERL1Q9BUN8 251 aa15.6■□□□□ 0.09
ECHDC1-203ENST00000368291 KRBOX1C9JBD0 128 aa15.59■□□□□ 0.09
ECHDC1-203ENST00000368291 DNAH10Q8IVF4 4471 aa15.58■□□□□ 0.08
ECHDC1-203ENST00000368291 TRAV4A0A0B4J268 109 aa15.58■□□□□ 0.08
ECHDC1-203ENST00000368291 B4DEV8 164 aa15.58■□□□□ 0.08
ECHDC1-203ENST00000368291 ORM1P02763 201 aa15.58■□□□□ 0.08
ECHDC1-203ENST00000368291 BCL2P10415 239 aa15.58■□□□□ 0.08
ECHDC1-203ENST00000368291 RPL35P42766 123 aaKnown RBP15.58■□□□□ 0.08
ECHDC1-203ENST00000368291 MEF2BQ02080 365 aaPredicted RBP15.58■□□□□ 0.08
ECHDC1-203ENST00000368291 BAGE2Q86Y30 109 aa15.58■□□□□ 0.08
ECHDC1-203ENST00000368291 PRO0255Q9UI72 69 aa15.58■□□□□ 0.08
ECHDC1-203ENST00000368291 A0A096LPF7 62 aa15.57■□□□□ 0.08
ECHDC1-203ENST00000368291 PGPEP1LA6NFU8 196 aa15.57■□□□□ 0.08
ECHDC1-203ENST00000368291 M0R036 132 aa15.57■□□□□ 0.08
ECHDC1-203ENST00000368291 CRYBA4P53673 196 aa15.57■□□□□ 0.08
ECHDC1-203ENST00000368291 ZNF876PQ49A33 203 aa15.57■□□□□ 0.08
ECHDC1-203ENST00000368291 DNLZQ5SXM8 178 aa15.57■□□□□ 0.08
ECHDC1-203ENST00000368291 LYPD6BQ8NI32 183 aa15.57■□□□□ 0.08
ECHDC1-203ENST00000368291 C9JCJ5 164 aa15.56■□□□□ 0.08
ECHDC1-203ENST00000368291 IFNA1P01562 189 aa15.56■□□□□ 0.08
ECHDC1-203ENST00000368291 PTH2Q96A98 100 aa15.56■□□□□ 0.08
ECHDC1-203ENST00000368291 HHLA3Q9XRX5 114 aa15.56■□□□□ 0.08
ECHDC1-203ENST00000368291 LINC00588Q9Y4M8 146 aa15.56■□□□□ 0.08
ECHDC1-203ENST00000368291 FRAS1Q86XX4 4008 aa15.55■□□□□ 0.08
ECHDC1-203ENST00000368291 PAX4O43316 350 aa15.55■□□□□ 0.08
ECHDC1-203ENST00000368291 ASIPP42127 132 aa15.55■□□□□ 0.08
ECHDC1-203ENST00000368291 BLOC1S1P78537 153 aa15.55■□□□□ 0.08
ECHDC1-203ENST00000368291 LINC01559Q495D7 138 aa15.55■□□□□ 0.08
ECHDC1-203ENST00000368291 ZNF506Q5JVG8 444 aa15.55■□□□□ 0.08
ECHDC1-203ENST00000368291 OR4C5Q8NGB2 326 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms