RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NABP1Q96AH0 204 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 IGHV1-2P23083 117 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 DUX4L9Q6RFH8 374 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-207ENST00000367255 LINC01587Q99440 93 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 CGAP01215 116 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 C14orf177Q52M58 125 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 MORN5Q5VZ52 161 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 FGFBP3Q8TAT2 258 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 H3BRN7 92 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 RCHY1Q96PM5 261 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 LINC00473A8K010 186 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 COX7A1P24310 79 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 CDSNQ15517 529 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 DHRS4-AS1Q9P1J3 65 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 ATAD5Q96QE3 1844 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 SCN3AQ9NY46 2000 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 BCORQ6W2J9 1755 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 SAA2P0DJI9 122 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-207ENST00000367255 ADMP35318 185 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 ESPL1Q14674 2120 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 CYP4F30PQ9H0H9 118 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 SIT1Q9Y3P8 196 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 CDK2AP2O75956 126 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 C9orf85Q96MD7 179 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 TP53AIP1Q9HCN2 124 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 UBE2E1P51965 193 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 CFAP126Q5VTH2 177 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 RBM3P98179 157 aaKnown RBP2.97□□□□□ -1.93
SYNE1-207ENST00000367255 ROS1P08922 2347 aa2.96□□□□□ -1.93
SYNE1-207ENST00000367255 NFE4Q86UQ8 179 aa2.96□□□□□ -1.93
SYNE1-207ENST00000367255 FAM216BQ8N7L0 139 aa2.96□□□□□ -1.93
SYNE1-207ENST00000367255 ZNF22P17026 224 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-207ENST00000367255 TRBV7-3A0A075B6L6 115 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 MRPL36Q9P0J6 103 aaKnown RBP2.96□□□□□ -1.94
SYNE1-207ENST00000367255 ZNF837Q96EG3 531 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-207ENST00000367255 COL4A6Q14031 1691 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 PKD1L2Q7Z442 2459 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV3-64A0A075B6Q5 118 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 ZNF134P52741 427 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 IGKV1D-33P01593 117 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 IGKV1-33P01594 117 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 IGKV1D-8A0A087WSZ0 117 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 LYNX1G3V0Z9 82 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 LYNX1P0DP58 116 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 FAM236DA0A1B0GTK5 79 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 FAM236CP0DP71 79 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 EBI3Q14213 229 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 SS18Q15532 418 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 KLK9Q2XQG4 91 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 MDFIQ99750 246 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 KLK9Q9UKQ9 250 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 RNASE7Q9H1E1 156 aaKnown RBP2.96□□□□□ -1.94
SYNE1-207ENST00000367255 NCKAP5O14513 1909 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV1OR15-9A0A0B4J2B8 117 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 IGKV1-5P01602 117 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 DPH3Q96FX2 82 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV3OR16-12A0A075B7B8 117 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 FAM19A3Q7Z5A8 133 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 C18orf15Q96N68 181 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 IGF2BP2-AS1Q96M15 143 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 A0A1W2PR77 199 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 TTTY12Q9BZ98 90 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 ZNF71Q9NQZ8 489 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-207ENST00000367255 MBD6Q96DN6 1003 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 ZNF56Q15929 161 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 C5orf38Q86SI9 138 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 MBD3L4A6NDZ8 208 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-207ENST00000367255 MBD3L3A6NE82 208 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-207ENST00000367255 MBD3L5A6NJ08 208 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-207ENST00000367255 K7EIM0 57 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 MBD3L2Q8NHZ7 208 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-207ENST00000367255 MTORP42345 2549 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 IGHV3-73A0A0B4J1V6 119 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 NDUFA1O15239 70 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 CCL17Q92583 94 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 LINC00474Q9P2X8 69 aa2.96□□□□□ -1.94
SYNE1-207ENST00000367255 C19orf71A6NCJ1 209 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 C2orf70A6NJV1 201 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 IGLV1-44P01699 117 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 MIAQ16674 131 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 ARTNQ5T4W7 220 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 TLN1Q9Y490 2541 aaKnown RBP2.95□□□□□ -1.94
SYNE1-207ENST00000367255 TRPM6Q9BX84 2022 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 ZNF625Q96I27 306 aaPredicted RBP2.95□□□□□ -1.94
SYNE1-207ENST00000367255 SCN5AQ14524 2016 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 C17orf100A8MU93 164 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 VEGFBP49765 207 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 DOCK8Q8NF50 2099 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 GNG5P63218 68 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 AMELXQ99217 191 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 PKDREJQ9NTG1 2253 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 WNK3Q9BYP7 1800 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 COX6A1P12074 109 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 UPK3BQ9BT76 320 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 PRSS29PA6NIE9 313 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 PTPRQQ9UMZ3 2332 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 ZNRF1Q8ND25 227 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 ATP1A1-AS1Q5TC04 95 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 DYSFO75923 2080 aa2.95□□□□□ -1.94
SYNE1-207ENST00000367255 SPEM2Q0P670 501 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 456.2 ms