RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 C3orf36Q3SXR2 165 aa12.54□□□□□ -0.4
CLSTN1-201ENST00000361311 Q9UFV3 132 aa12.54□□□□□ -0.4
CLSTN1-201ENST00000361311 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
CLSTN1-201ENST00000361311 AGPAT4-IT1Q9H0P7 198 aa12.54□□□□□ -0.4
CLSTN1-201ENST00000361311 K7EIM0 57 aa12.53□□□□□ -0.4
CLSTN1-201ENST00000361311 FCN3O75636 299 aa12.53□□□□□ -0.4
CLSTN1-201ENST00000361311 LY6HO94772 140 aa12.53□□□□□ -0.4
CLSTN1-201ENST00000361311 SMIM20Q8N5G0 67 aa12.53□□□□□ -0.4
CLSTN1-201ENST00000361311 C8orf31Q8N9H6 132 aa12.53□□□□□ -0.4
CLSTN1-201ENST00000361311 C1orf229Q6ZS94 237 aaPredicted RBP12.53□□□□□ -0.4
CLSTN1-201ENST00000361311 E7EQL1 145 aa12.52□□□□□ -0.4
CLSTN1-201ENST00000361311 M0R1W7 72 aa12.52□□□□□ -0.4
CLSTN1-201ENST00000361311 CFC1BP0CG36 223 aa12.52□□□□□ -0.4
CLSTN1-201ENST00000361311 CFC1P0CG37 223 aa12.52□□□□□ -0.4
CLSTN1-201ENST00000361311 MORN3Q6PF18 240 aaPredicted RBP12.52□□□□□ -0.4
CLSTN1-201ENST00000361311 TMEM219Q86XT9 240 aa12.52□□□□□ -0.4
CLSTN1-201ENST00000361311 EDA2RQ9HAV5 297 aa12.52□□□□□ -0.4
CLSTN1-201ENST00000361311 LY6G5BQ8NDX9 201 aa12.52□□□□□ -0.41
CLSTN1-201ENST00000361311 KLHL30-AS1Q8NEE0 82 aa12.52□□□□□ -0.41
CLSTN1-201ENST00000361311 NCKAP5O14513 1909 aa12.52□□□□□ -0.41
CLSTN1-201ENST00000361311 SPANXB1Q9NS25 103 aaPredicted RBP12.52□□□□□ -0.41
CLSTN1-201ENST00000361311 SPG11Q96JI7 2443 aa12.52□□□□□ -0.41
CLSTN1-201ENST00000361311 PTH2Q96A98 100 aa12.52□□□□□ -0.41
CLSTN1-201ENST00000361311 MOB4Q9Y3A3 225 aa12.52□□□□□ -0.41
CLSTN1-201ENST00000361311 LY6DQ14210 128 aa12.51□□□□□ -0.41
CLSTN1-201ENST00000361311 CTSZQ9UBR2 303 aa12.51□□□□□ -0.41
CLSTN1-201ENST00000361311 TANC2Q9HCD6 1990 aa12.51□□□□□ -0.41
CLSTN1-201ENST00000361311 IGHV3-73A0A0B4J1V6 119 aa12.51□□□□□ -0.41
CLSTN1-201ENST00000361311 CRYGCP07315 174 aa12.51□□□□□ -0.41
CLSTN1-201ENST00000361311 TRBV6-1A0A0K0K1D8 114 aa12.51□□□□□ -0.41
CLSTN1-201ENST00000361311 E9PLD3 99 aa12.51□□□□□ -0.41
CLSTN1-201ENST00000361311 CGB3P0DN86 165 aa12.51□□□□□ -0.41
CLSTN1-201ENST00000361311 CGB7P0DN87 165 aa12.51□□□□□ -0.41
CLSTN1-201ENST00000361311 TRGV11A0A075B6L2 103 aa12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 THBDP07204 575 aa12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 DNAH12Q6ZR08 3092 aa12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 FOXE3Q13461 319 aa12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 NCOR2Q9Y618 2525 aa12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 DUSP14O95147 198 aaKnown RBP12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 FAM110DQ8TAY7 271 aaPredicted RBP12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 MUC22E2RYF6 1773 aaPredicted RBP12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 IGLV2-23P01705 113 aa12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 TCTEX1D4Q5JR98 221 aa12.5□□□□□ -0.41
CLSTN1-201ENST00000361311 TECTAO75443 2155 aa12.49□□□□□ -0.41
CLSTN1-201ENST00000361311 ATP6V0E1O15342 81 aa12.49□□□□□ -0.41
CLSTN1-201ENST00000361311 SPRY2O43597 315 aa12.49□□□□□ -0.41
CLSTN1-201ENST00000361311 LINC01587Q99440 93 aa12.49□□□□□ -0.41
CLSTN1-201ENST00000361311 KAAG1Q9UBP8 84 aa12.49□□□□□ -0.41
CLSTN1-201ENST00000361311 LTBP2Q14767 1821 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 C1orf159Q96HA4 380 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 PCNTO95613 3336 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 G3V318 75 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 ANKRD29Q8N6D5 301 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 RHPN1-AS1Q9BWJ2 59 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 TM2D2Q9BX73 214 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 IGKV2D-26A0A0A0MRZ7 120 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 VWC2LB2RUY7 222 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 MSMPQ1L6U9 139 aa12.48□□□□□ -0.41
CLSTN1-201ENST00000361311 Q6ZS92 163 aa12.47□□□□□ -0.41
CLSTN1-201ENST00000361311 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
CLSTN1-201ENST00000361311 CARD19Q96LW7 228 aa12.47□□□□□ -0.41
CLSTN1-201ENST00000361311 CEP350Q5VT06 3117 aa12.47□□□□□ -0.41
CLSTN1-201ENST00000361311 GAGE2AQ6NT46 116 aa12.47□□□□□ -0.41
CLSTN1-201ENST00000361311 TRPT1Q86TN4 253 aaKnown RBP12.47□□□□□ -0.41
CLSTN1-201ENST00000361311 RNF183Q96D59 192 aa12.47□□□□□ -0.41
CLSTN1-201ENST00000361311 RPL39LQ96EH5 51 aaKnown RBP12.47□□□□□ -0.41
CLSTN1-201ENST00000361311 URB1-AS1Q96HZ7 61 aa12.47□□□□□ -0.41
CLSTN1-201ENST00000361311 RBMY1BA6NDE4 496 aaKnown RBP12.46□□□□□ -0.41
CLSTN1-201ENST00000361311 RBMY1EA6NEQ0 496 aaKnown RBP12.46□□□□□ -0.41
CLSTN1-201ENST00000361311 RBMY1DP0C7P1 496 aaKnown RBP12.46□□□□□ -0.41
CLSTN1-201ENST00000361311 RBMY1A1P0DJD3 496 aaKnown RBP12.46□□□□□ -0.41
CLSTN1-201ENST00000361311 RBMY1CP0DJD4 496 aa12.46□□□□□ -0.41
CLSTN1-201ENST00000361311 PRSS33Q8NF86 280 aa12.46□□□□□ -0.41
CLSTN1-201ENST00000361311 NDUFA12Q9UI09 145 aa12.46□□□□□ -0.41
CLSTN1-201ENST00000361311 Q6ZUT4 128 aa12.46□□□□□ -0.42
CLSTN1-201ENST00000361311 ZNF625Q96I27 306 aaPredicted RBP12.46□□□□□ -0.42
CLSTN1-201ENST00000361311 FAM215AQ9Y5M1 114 aa12.46□□□□□ -0.42
CLSTN1-201ENST00000361311 TRAV12-1A0A0B4J245 112 aa12.46□□□□□ -0.42
CLSTN1-201ENST00000361311 MT-ATP8P03928 68 aa12.46□□□□□ -0.42
CLSTN1-201ENST00000361311 MYCNOSP40205 109 aa12.46□□□□□ -0.42
CLSTN1-201ENST00000361311 A4D1N5 150 aa12.45□□□□□ -0.42
CLSTN1-201ENST00000361311 TEX22C9J3V5 150 aa12.45□□□□□ -0.42
CLSTN1-201ENST00000361311 CITED1Q99966 193 aa12.45□□□□□ -0.42
CLSTN1-201ENST00000361311 PIMREGQ9BSJ6 248 aa12.45□□□□□ -0.42
CLSTN1-201ENST00000361311 ANKHD1Q8IWZ3 2542 aaKnown RBP12.45□□□□□ -0.42
CLSTN1-201ENST00000361311 LGALS1P09382 135 aaKnown RBP12.45□□□□□ -0.42
CLSTN1-201ENST00000361311 RBAKDNA6NC62 111 aa12.44□□□□□ -0.42
CLSTN1-201ENST00000361311 ADARB2-AS1A8MUL3 147 aa12.44□□□□□ -0.42
CLSTN1-201ENST00000361311 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
CLSTN1-201ENST00000361311 CRPP02741 224 aa12.44□□□□□ -0.42
CLSTN1-201ENST00000361311 HIST1H4AP62805 103 aaKnown RBP12.44□□□□□ -0.42
CLSTN1-201ENST00000361311 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
CLSTN1-201ENST00000361311 PRAC2D3DTV9 90 aa12.43□□□□□ -0.42
CLSTN1-201ENST00000361311 PRIMA1Q86XR5 153 aa12.43□□□□□ -0.42
CLSTN1-201ENST00000361311 IGHV1-69DA0A0B4J2H0 117 aa12.43□□□□□ -0.42
CLSTN1-201ENST00000361311 RASL10AQ92737 203 aa12.43□□□□□ -0.42
CLSTN1-201ENST00000361311 SAA4P35542 130 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 C7orf69Q9H7B7 122 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 FAM223BA6NKX1 122 aa12.42□□□□□ -0.42
CLSTN1-201ENST00000361311 OVOL3O00110 214 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms