RNA–Protein interactions for RNA: ENST00000360831.9

NLE1-201, Transcript of notchless homolog 1, humanhuman

TSL 5 BASIC

Gene NLE1, Length 1,726 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-201ENST00000360831 SCRT2Q9NQ03 307 aa13.84□□□□□ -0.19
NLE1-201ENST00000360831 LINC01546A6NGU7 62 aa13.83□□□□□ -0.2
NLE1-201ENST00000360831 HINT1P49773 126 aaPredicted RBP13.83□□□□□ -0.2
NLE1-201ENST00000360831 SLC25A34Q6PIV7 304 aa13.83□□□□□ -0.2
NLE1-201ENST00000360831 C9orf139Q6ZV77 190 aa13.83□□□□□ -0.2
NLE1-201ENST00000360831 IGKV3D-20A0A0C4DH25 116 aa13.82□□□□□ -0.2
NLE1-201ENST00000360831 SMKR1H3BMG3 65 aa13.82□□□□□ -0.2
NLE1-201ENST00000360831 NDUFA4O00483 81 aa13.82□□□□□ -0.2
NLE1-201ENST00000360831 IGHG2P01859 326 aa13.82□□□□□ -0.2
NLE1-201ENST00000360831 USMG5Q96IX5 58 aa13.82□□□□□ -0.2
NLE1-201ENST00000360831 MSRB1Q9NZV6 116 aa13.82□□□□□ -0.2
NLE1-201ENST00000360831 C11orf21Q9P2W6 132 aa13.82□□□□□ -0.2
NLE1-201ENST00000360831 LINC00527Q9UJ94 153 aa13.82□□□□□ -0.2
NLE1-201ENST00000360831 NCR2O95944 276 aa13.81□□□□□ -0.2
NLE1-201ENST00000360831 PPIFP30405 207 aaKnown RBP13.81□□□□□ -0.2
NLE1-201ENST00000360831 MCRIP2Q9BUT9 160 aaKnown RBP13.81□□□□□ -0.2
NLE1-201ENST00000360831 TIMM8BQ9Y5J9 83 aaPredicted RBP13.81□□□□□ -0.2
NLE1-201ENST00000360831 TCF21O43680 179 aa13.81□□□□□ -0.2
NLE1-201ENST00000360831 HBDP02042 147 aa13.81□□□□□ -0.2
NLE1-201ENST00000360831 LGALS9BQ3B8N2 356 aa13.81□□□□□ -0.2
NLE1-201ENST00000360831 LGALS9CQ6DKI2 356 aa13.81□□□□□ -0.2
NLE1-201ENST00000360831 DPF1Q92782 380 aa13.81□□□□□ -0.2
NLE1-201ENST00000360831 LENEPQ9Y5L5 61 aa13.81□□□□□ -0.2
NLE1-201ENST00000360831 C16orf92Q96LL3 132 aa13.8□□□□□ -0.2
NLE1-201ENST00000360831 PMCHL2Q9BQD1 86 aa13.8□□□□□ -0.2
NLE1-201ENST00000360831 MAP1LC3AQ9H492 121 aa13.8□□□□□ -0.2
NLE1-201ENST00000360831 GOLT1BQ9Y3E0 138 aa13.8□□□□□ -0.2
NLE1-201ENST00000360831 H0Y8G0 127 aa13.79□□□□□ -0.2
NLE1-201ENST00000360831 ZNF124Q15973 351 aa13.79□□□□□ -0.2
NLE1-201ENST00000360831 LY6EQ16553 131 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 DEFB112Q30KQ8 113 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 ORAOV1Q8WV07 137 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 C20orf173Q96LM9 149 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 IGHV4-4A0A075B6R2 117 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 H3BUX3 64 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 TRBV12-3P01733 135 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 OR8A1Q8NGG7 326 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 NIPBLQ6KC79 2804 aaeCLIP13.78□□□□□ -0.2
NLE1-201ENST00000360831 MXRA5Q9NR99 2828 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
NLE1-201ENST00000360831 SOCS3O14543 225 aa13.77□□□□□ -0.21
NLE1-201ENST00000360831 OVOL1O14753 267 aa13.77□□□□□ -0.21
NLE1-201ENST00000360831 CACNG7P62955 275 aa13.77□□□□□ -0.21
NLE1-201ENST00000360831 UNQ9165/PRO28630Q6UXU0 137 aa13.77□□□□□ -0.21
NLE1-201ENST00000360831 GPHB5Q86YW7 130 aa13.77□□□□□ -0.21
NLE1-201ENST00000360831 ZNF418Q8TF45 676 aaPredicted RBP13.77□□□□□ -0.21
NLE1-201ENST00000360831 LINC00477Q96M19 166 aa13.77□□□□□ -0.21
NLE1-201ENST00000360831 NXT2Q9NPJ8 142 aaKnown RBP13.77□□□□□ -0.21
NLE1-201ENST00000360831 CUBNO60494 3623 aa13.77□□□□□ -0.21
NLE1-201ENST00000360831 IGHV7-4-1A0A0J9YVY3 117 aa13.76□□□□□ -0.21
NLE1-201ENST00000360831 SNAI2O43623 268 aa13.76□□□□□ -0.21
NLE1-201ENST00000360831 TNFRSF6BO95407 300 aa13.76□□□□□ -0.21
NLE1-201ENST00000360831 NPSP0C0P6 89 aa13.76□□□□□ -0.21
NLE1-201ENST00000360831 COX8AP10176 69 aa13.76□□□□□ -0.21
NLE1-201ENST00000360831 IFI27L1Q96BM0 104 aa13.76□□□□□ -0.21
NLE1-201ENST00000360831 ZNF738Q8NE65 137 aa13.76□□□□□ -0.21
NLE1-201ENST00000360831 OR1N2Q8NGR9 330 aa13.76□□□□□ -0.21
NLE1-201ENST00000360831 ZNF580Q9UK33 172 aa13.76□□□□□ -0.21
NLE1-201ENST00000360831 IGLV1-40P01703 118 aa13.75□□□□□ -0.21
NLE1-201ENST00000360831 PRSS47A8MTI9 375 aa13.74□□□□□ -0.21
NLE1-201ENST00000360831 FCER1GP30273 86 aa13.74□□□□□ -0.21
NLE1-201ENST00000360831 FOXE3Q13461 319 aa13.74□□□□□ -0.21
NLE1-201ENST00000360831 Q6YL49 198 aa13.74□□□□□ -0.21
NLE1-201ENST00000360831 SMIM15Q7Z3B0 74 aa13.74□□□□□ -0.21
NLE1-201ENST00000360831 DEFB125Q8N687 156 aa13.74□□□□□ -0.21
NLE1-201ENST00000360831 KLK15Q9H2R5 256 aa13.74□□□□□ -0.21
NLE1-201ENST00000360831 TP73-AS1Q9UF72 201 aa13.74□□□□□ -0.21
NLE1-201ENST00000360831 COX11Q9Y6N1 276 aa13.74□□□□□ -0.21
NLE1-201ENST00000360831 GAS8-AS1O95177 125 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 PF4V1P10720 104 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 CFHR3Q02985 330 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 Q8N8P6 123 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 OR4X2Q8NGF9 303 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 A0A0G2JLM5 398 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 FXYD7P58549 80 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 HILS1P60008 231 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 BLCAPP62952 87 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 MPV17L2Q567V2 206 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 BVES-AS1Q5T3Y7 98 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 PRR9Q5T870 116 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 C12orf54Q6X4T0 127 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 ZFAND2AQ8N6M9 145 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 OR2K2Q8NGT1 345 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 OR10J6PQ8NGY7 276 aa13.73□□□□□ -0.21
NLE1-201ENST00000360831 SETD2Q9BYW2 2564 aaPredicted RBP13.72□□□□□ -0.21
NLE1-201ENST00000360831 IGLV2-18A0A075B6J9 118 aa13.72□□□□□ -0.21
NLE1-201ENST00000360831 HOXA3O43365 443 aaPredicted RBP13.72□□□□□ -0.21
NLE1-201ENST00000360831 NUDT3O95989 172 aa13.72□□□□□ -0.21
NLE1-201ENST00000360831 PRIMA1Q86XR5 153 aa13.72□□□□□ -0.21
NLE1-201ENST00000360831 JMJD8Q96S16 334 aa13.72□□□□□ -0.21
NLE1-201ENST00000360831 IGHV3-11P01762 117 aa13.71□□□□□ -0.21
NLE1-201ENST00000360831 GATA1P15976 413 aaPredicted RBP13.71□□□□□ -0.21
NLE1-201ENST00000360831 ANKRD39Q53RE8 183 aa13.71□□□□□ -0.21
NLE1-201ENST00000360831 FAM19A4Q96LR4 140 aa13.71□□□□□ -0.21
NLE1-201ENST00000360831 ESM1Q9NQ30 184 aa13.71□□□□□ -0.21
NLE1-201ENST00000360831 TRBV7-9A0A0J9YWB2 115 aa13.7□□□□□ -0.22
NLE1-201ENST00000360831 FGF6P10767 208 aa13.7□□□□□ -0.22
NLE1-201ENST00000360831 EVI2AP22794 236 aa13.7□□□□□ -0.22
NLE1-201ENST00000360831 LEPP41159 167 aa13.7□□□□□ -0.22
NLE1-201ENST00000360831 Q6ZQT7 251 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms