RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 MRAPQ8TCY5 172 aa12.15□□□□□ -0.46
RTN3-205ENST00000356000 IGFBPL1Q8WX77 278 aa12.15□□□□□ -0.46
RTN3-205ENST00000356000 K7ENP7 123 aa12.15□□□□□ -0.46
RTN3-205ENST00000356000 ZNF672Q499Z4 452 aaPredicted RBP12.15□□□□□ -0.46
RTN3-205ENST00000356000 SLC25A29Q8N8R3 303 aa12.15□□□□□ -0.46
RTN3-205ENST00000356000 NRACQ8N912 160 aa12.15□□□□□ -0.46
RTN3-205ENST00000356000 ZNRF1Q8ND25 227 aa12.15□□□□□ -0.46
RTN3-205ENST00000356000 KIR2DL5BQ8NHK3 375 aa12.15□□□□□ -0.46
RTN3-205ENST00000356000 SRSF2Q01130 221 aaKnown RBP12.14□□□□□ -0.47
RTN3-205ENST00000356000 PLGLAQ15195 96 aa12.14□□□□□ -0.47
RTN3-205ENST00000356000 ATP5G1P05496 136 aa12.14□□□□□ -0.47
RTN3-205ENST00000356000 ELANEP08246 267 aa12.14□□□□□ -0.47
RTN3-205ENST00000356000 DMDP11532 3685 aa12.14□□□□□ -0.47
RTN3-205ENST00000356000 Q6ZS46 218 aa12.14□□□□□ -0.47
RTN3-205ENST00000356000 RPUSD1Q9UJJ7 312 aaKnown RBP12.14□□□□□ -0.47
RTN3-205ENST00000356000 SPEGQ15772 3267 aa12.14□□□□□ -0.47
RTN3-205ENST00000356000 NTN3O00634 580 aaPredicted RBP12.13□□□□□ -0.47
RTN3-205ENST00000356000 EIF4EBP3O60516 100 aaPredicted RBP12.13□□□□□ -0.47
RTN3-205ENST00000356000 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
RTN3-205ENST00000356000 DUX5Q96PT3 197 aa12.13□□□□□ -0.47
RTN3-205ENST00000356000 LY6G6EA0A0G2JKS1 128 aa12.13□□□□□ -0.47
RTN3-205ENST00000356000 GAGE2AQ6NT46 116 aa12.13□□□□□ -0.47
RTN3-205ENST00000356000 SCGB3A1Q96QR1 104 aa12.13□□□□□ -0.47
RTN3-205ENST00000356000 U3KQA8 63 aa12.13□□□□□ -0.47
RTN3-205ENST00000356000 COL27A1Q8IZC6 1860 aaPredicted RBP12.12□□□□□ -0.47
RTN3-205ENST00000356000 CRYGAP11844 174 aa12.12□□□□□ -0.47
RTN3-205ENST00000356000 SRRM5B3KS81 715 aa12.12□□□□□ -0.47
RTN3-205ENST00000356000 C3orf36Q3SXR2 165 aa12.12□□□□□ -0.47
RTN3-205ENST00000356000 TMEM170BQ5T4T1 132 aa12.12□□□□□ -0.47
RTN3-205ENST00000356000 C2orf82Q6UX34 121 aa12.12□□□□□ -0.47
RTN3-205ENST00000356000 PINLYPA6NC86 204 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 COX7CP15954 63 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 ZNF80P51504 273 aaPredicted RBP12.11□□□□□ -0.47
RTN3-205ENST00000356000 TOMM6Q96B49 74 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 A0A0B4J2C4 111 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 IGHV4-39P01824 125 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 HCP5Q6MZN7 132 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 ZNF833PQ6ZTB9 187 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 SHANK2-AS3Q9BTD1 123 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 ZNRD1Q9P1U0 126 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 DSCAML1Q8TD84 2053 aa12.11□□□□□ -0.47
RTN3-205ENST00000356000 IGHV3-21A0A0B4J1V1 117 aa12.1□□□□□ -0.47
RTN3-205ENST00000356000 MAGEA5P43359 124 aa12.1□□□□□ -0.47
RTN3-205ENST00000356000 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
RTN3-205ENST00000356000 LINC00527Q9UJ94 153 aa12.1□□□□□ -0.47
RTN3-205ENST00000356000 CACNA1GO43497 2377 aa12.1□□□□□ -0.47
RTN3-205ENST00000356000 VPS13AQ96RL7 3174 aa12.1□□□□□ -0.47
RTN3-205ENST00000356000 H3BT86 120 aa12.1□□□□□ -0.47
RTN3-205ENST00000356000 IL17RELQ6ZVW7 336 aa12.1□□□□□ -0.47
RTN3-205ENST00000356000 H3BRN7 92 aa12.09□□□□□ -0.47
RTN3-205ENST00000356000 TRAV17A0A0B4J275 112 aa12.09□□□□□ -0.47
RTN3-205ENST00000356000 HERVK_113P61574 105 aa12.09□□□□□ -0.47
RTN3-205ENST00000356000 ERCC8Q13216 396 aa12.09□□□□□ -0.47
RTN3-205ENST00000356000 CHD8Q9HCK8 2581 aa12.09□□□□□ -0.47
RTN3-205ENST00000356000 OVOL1O14753 267 aa12.08□□□□□ -0.47
RTN3-205ENST00000356000 TIMM8AO60220 97 aaPredicted RBP12.08□□□□□ -0.47
RTN3-205ENST00000356000 C2orf48Q96LS8 159 aa12.08□□□□□ -0.47
RTN3-205ENST00000356000 H7C423 109 aa12.08□□□□□ -0.48
RTN3-205ENST00000356000 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
RTN3-205ENST00000356000 PKD1L2Q7Z442 2459 aa12.08□□□□□ -0.48
RTN3-205ENST00000356000 TRBV30A0A0K0K1B3 111 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 WT1P19544 449 aaPredicted RBP12.07□□□□□ -0.48
RTN3-205ENST00000356000 C4orf26Q17RF5 130 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 ORMDL2Q53FV1 153 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 DPH3Q96FX2 82 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 METTL26Q96S19 204 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 LINC00574Q9H8X3 128 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 CHD6Q8TD26 2715 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 F8WDY8 70 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 H7C2G1 150 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 ORM1P02763 201 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 PDE6HQ13956 83 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 KLK15Q9H2R5 256 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 MZT1Q08AG7 82 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 SMIM2Q9BVW6 85 aa12.07□□□□□ -0.48
RTN3-205ENST00000356000 ARFGEF3Q5TH69 2177 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 IGKV2-40A0A087WW87 121 aaPredicted RBP12.06□□□□□ -0.48
RTN3-205ENST00000356000 TRAV26-2A0A0B4J265 109 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 A0A0G2JNJ9 132 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 IGKV2D-40P01614 121 aaPredicted RBP12.06□□□□□ -0.48
RTN3-205ENST00000356000 TRGV3P03979 118 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 Q9UFV3 132 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 SDK1Q7Z5N4 2213 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 SPTBN2O15020 2390 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 WDR87Q6ZQQ6 2873 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 ACYP1P07311 99 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 TMEM30BQ3MIR4 351 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 GUSBP11Q6P575 273 aa12.06□□□□□ -0.48
RTN3-205ENST00000356000 C17orf100A8MU93 164 aa12.05□□□□□ -0.48
RTN3-205ENST00000356000 Q5XG85 94 aa12.05□□□□□ -0.48
RTN3-205ENST00000356000 TSPEAR-AS2P59090 65 aa12.05□□□□□ -0.48
RTN3-205ENST00000356000 Q1RN00 199 aa12.05□□□□□ -0.48
RTN3-205ENST00000356000 MRGPRG-AS1Q2M3A8 158 aa12.05□□□□□ -0.48
RTN3-205ENST00000356000 HRCT1Q6UXD1 115 aa12.05□□□□□ -0.48
RTN3-205ENST00000356000 AMELXQ99217 191 aa12.05□□□□□ -0.48
RTN3-205ENST00000356000 TRIAP1O43715 76 aa12.04□□□□□ -0.48
RTN3-205ENST00000356000 CRYGBP07316 175 aa12.04□□□□□ -0.48
RTN3-205ENST00000356000 ZNF256Q9Y2P7 627 aaPredicted RBP12.04□□□□□ -0.48
RTN3-205ENST00000356000 CRYGDP07320 174 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms