RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 TRAV40A0A0B4J280 105 aa13.88□□□□□ -0.19
SPNS3-201ENST00000355530 NDUFA4O00483 81 aa13.88□□□□□ -0.19
SPNS3-201ENST00000355530 OVOL1O14753 267 aa13.88□□□□□ -0.19
SPNS3-201ENST00000355530 OR10J6PQ8NGY7 276 aa13.88□□□□□ -0.19
SPNS3-201ENST00000355530 SPCS1Q9Y6A9 102 aa13.88□□□□□ -0.19
SPNS3-201ENST00000355530 MED13LQ71F56 2210 aa13.87□□□□□ -0.19
SPNS3-201ENST00000355530 TRAV21A0A0B4J279 112 aa13.87□□□□□ -0.19
SPNS3-201ENST00000355530 FABP2P12104 132 aa13.87□□□□□ -0.19
SPNS3-201ENST00000355530 FXYD2P54710 66 aa13.87□□□□□ -0.19
SPNS3-201ENST00000355530 ZFAND2AQ8N6M9 145 aa13.87□□□□□ -0.19
SPNS3-201ENST00000355530 GPHB5Q86YW7 130 aa13.87□□□□□ -0.19
SPNS3-201ENST00000355530 LINC00527Q9UJ94 153 aa13.87□□□□□ -0.19
SPNS3-201ENST00000355530 CACNA1BQ00975 2339 aa13.86□□□□□ -0.19
SPNS3-201ENST00000355530 IGHV1-69DA0A0B4J2H0 117 aa13.86□□□□□ -0.19
SPNS3-201ENST00000355530 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.86□□□□□ -0.19
SPNS3-201ENST00000355530 SOCS3O14543 225 aa13.86□□□□□ -0.19
SPNS3-201ENST00000355530 IGHV1-69P01742 117 aa13.86□□□□□ -0.19
SPNS3-201ENST00000355530 SLC25A16P16260 332 aa13.86□□□□□ -0.19
SPNS3-201ENST00000355530 ORMDL2Q53FV1 153 aa13.86□□□□□ -0.19
SPNS3-201ENST00000355530 UNQ9165/PRO28630Q6UXU0 137 aa13.86□□□□□ -0.19
SPNS3-201ENST00000355530 TM2D2Q9BX73 214 aa13.86□□□□□ -0.19
SPNS3-201ENST00000355530 TRAV12-1A0A0B4J245 112 aa13.85□□□□□ -0.19
SPNS3-201ENST00000355530 IGF1P05019 195 aa13.85□□□□□ -0.19
SPNS3-201ENST00000355530 SAMD5Q5TGI4 173 aa13.85□□□□□ -0.19
SPNS3-201ENST00000355530 SPTBN1Q01082 2364 aaKnown RBP13.85□□□□□ -0.19
SPNS3-201ENST00000355530 K7EMI3 77 aa13.85□□□□□ -0.19
SPNS3-201ENST00000355530 MED14OSP0DP75 135 aa13.85□□□□□ -0.19
SPNS3-201ENST00000355530 ASIPP42127 132 aa13.85□□□□□ -0.19
SPNS3-201ENST00000355530 C20orf78Q9BR46 151 aa13.85□□□□□ -0.19
SPNS3-201ENST00000355530 DPH3P1Q9H4G8 78 aa13.85□□□□□ -0.19
SPNS3-201ENST00000355530 IGHV3OR16-10A0A075B7F0 116 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 H3BUA1 57 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 BRI3O95415 125 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 TRBV12-3P01733 135 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 SUMO2P61956 95 aaKnown RBP13.84□□□□□ -0.19
SPNS3-201ENST00000355530 CEND1Q8N111 149 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 HIVEP3Q5T1R4 2406 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 F8VRH5 84 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 M0R381 172 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 S100A4P26447 101 aaKnown RBP13.84□□□□□ -0.19
SPNS3-201ENST00000355530 COTL1Q14019 142 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 USMG5Q96IX5 58 aa13.84□□□□□ -0.19
SPNS3-201ENST00000355530 J3KRW8 73 aa13.83□□□□□ -0.2
SPNS3-201ENST00000355530 IGHV4-39P01824 125 aa13.83□□□□□ -0.2
SPNS3-201ENST00000355530 TAL2Q16559 108 aa13.83□□□□□ -0.2
SPNS3-201ENST00000355530 H7C1H1 209 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 RASL10AQ92737 203 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 TOMM6Q96B49 74 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 FAM19A4Q96LR4 140 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 MEGF9Q9H1U4 602 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 PHLDA3Q9Y5J5 127 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 COL6A6A6NMZ7 2263 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 SAP30O75446 220 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 BRD3OSQ6XYD6 125 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 NEGR1Q7Z3B1 354 aa13.82□□□□□ -0.2
SPNS3-201ENST00000355530 PHLDA1Q8WV24 401 aaPredicted RBP13.82□□□□□ -0.2
SPNS3-201ENST00000355530 ABCA2Q9BZC7 2435 aa13.81□□□□□ -0.2
SPNS3-201ENST00000355530 TRBV7-9A0A0J9YWB2 115 aa13.81□□□□□ -0.2
SPNS3-201ENST00000355530 APRG1Q8IVJ8 170 aa13.81□□□□□ -0.2
SPNS3-201ENST00000355530 K7ERJ3 54 aa13.81□□□□□ -0.2
SPNS3-201ENST00000355530 ANXA2RQ3ZCQ2 193 aa13.81□□□□□ -0.2
SPNS3-201ENST00000355530 MAPKAPK5-AS1Q8N8E1 139 aa13.81□□□□□ -0.2
SPNS3-201ENST00000355530 SCGB3A1Q96QR1 104 aa13.81□□□□□ -0.2
SPNS3-201ENST00000355530 NHP2Q9NX24 153 aaKnown RBP13.81□□□□□ -0.2
SPNS3-201ENST00000355530 IGHG2P01859 326 aa13.8□□□□□ -0.2
SPNS3-201ENST00000355530 C14orf178Q8N769 122 aaPredicted RBP13.79□□□□□ -0.2
SPNS3-201ENST00000355530 CHTOPQ9Y3Y2 248 aaKnown RBP13.79□□□□□ -0.2
SPNS3-201ENST00000355530 C19orf84I3L1E1 186 aa13.79□□□□□ -0.2
SPNS3-201ENST00000355530 PPP1R17O96001 155 aa13.79□□□□□ -0.2
SPNS3-201ENST00000355530 RPL39LQ96EH5 51 aaKnown RBP13.79□□□□□ -0.2
SPNS3-201ENST00000355530 SPOCK3Q9BQ16 436 aa13.79□□□□□ -0.2
SPNS3-201ENST00000355530 PIMREGQ9BSJ6 248 aa13.79□□□□□ -0.2
SPNS3-201ENST00000355530 SELENOKQ9Y6D0 94 aa13.79□□□□□ -0.2
SPNS3-201ENST00000355530 SVEP1Q4LDE5 3571 aa13.79□□□□□ -0.2
SPNS3-201ENST00000355530 RNASE4P34096 147 aaKnown RBP13.78□□□□□ -0.2
SPNS3-201ENST00000355530 RPL11P62913 178 aaKnown RBP13.78□□□□□ -0.2
SPNS3-201ENST00000355530 LY6DQ14210 128 aa13.78□□□□□ -0.2
SPNS3-201ENST00000355530 NEXN-AS1Q8NBZ9 246 aa13.78□□□□□ -0.2
SPNS3-201ENST00000355530 LINC01619G3V211 115 aa13.78□□□□□ -0.2
SPNS3-201ENST00000355530 G3V4G9 280 aa13.78□□□□□ -0.2
SPNS3-201ENST00000355530 MGPP08493 103 aa13.78□□□□□ -0.2
SPNS3-201ENST00000355530 KLK15Q9H2R5 256 aa13.78□□□□□ -0.2
SPNS3-201ENST00000355530 OR11H12B2RN74 326 aa13.77□□□□□ -0.21
SPNS3-201ENST00000355530 IGHV3-11P01762 117 aa13.77□□□□□ -0.21
SPNS3-201ENST00000355530 DEFB1P60022 68 aa13.77□□□□□ -0.21
SPNS3-201ENST00000355530 OR11H1Q8NG94 326 aa13.77□□□□□ -0.21
SPNS3-201ENST00000355530 OR11H2Q8NH07 326 aa13.77□□□□□ -0.21
SPNS3-201ENST00000355530 IGHV4-61A0A0C4DH41 118 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 RNF223E7ERA6 249 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 NXPH4O95158 308 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 LY6EQ16553 131 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 A6NDX4 124 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 H3BUX3 64 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 SPRY2O43597 315 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 PF4V1P10720 104 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 RNASE3P12724 160 aaKnown RBP13.76□□□□□ -0.21
SPNS3-201ENST00000355530 C2orf66Q6UXQ4 117 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 HIST1H4GQ99525 98 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 RHPN1-AS1Q9BWJ2 59 aa13.76□□□□□ -0.21
SPNS3-201ENST00000355530 CSTL1Q9H114 145 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms