RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 Q6ZQT7 251 aa16.85■□□□□ 0.29
NKX2-1-201ENST00000354822 IGLV2-18A0A075B6J9 118 aa16.85■□□□□ 0.29
NKX2-1-201ENST00000354822 MED14OSP0DP75 135 aa16.85■□□□□ 0.29
NKX2-1-201ENST00000354822 LCNL1Q6ZST4 164 aa16.85■□□□□ 0.29
NKX2-1-201ENST00000354822 NRACQ8N912 160 aa16.85■□□□□ 0.29
NKX2-1-201ENST00000354822 TP73-AS1Q9UF72 201 aa16.85■□□□□ 0.29
NKX2-1-201ENST00000354822 PSMB8P28062 276 aa16.84■□□□□ 0.29
NKX2-1-201ENST00000354822 ZFHX3Q15911 3703 aa16.84■□□□□ 0.29
NKX2-1-201ENST00000354822 ID1P41134 155 aa16.84■□□□□ 0.29
NKX2-1-201ENST00000354822 ASIPP42127 132 aa16.84■□□□□ 0.29
NKX2-1-201ENST00000354822 DEFB112Q30KQ8 113 aa16.84■□□□□ 0.29
NKX2-1-201ENST00000354822 VPS13CQ709C8 3753 aa16.84■□□□□ 0.29
NKX2-1-201ENST00000354822 S100A4P26447 101 aaKnown RBP16.83■□□□□ 0.28
NKX2-1-201ENST00000354822 FLNCQ14315 2725 aa16.83■□□□□ 0.28
NKX2-1-201ENST00000354822 ANKRD39Q53RE8 183 aa16.82■□□□□ 0.28
NKX2-1-201ENST00000354822 A0A096LNT2 108 aa16.82■□□□□ 0.28
NKX2-1-201ENST00000354822 IGHV4-59P01825 116 aa16.82■□□□□ 0.28
NKX2-1-201ENST00000354822 COL12A1Q99715 3063 aa16.81■□□□□ 0.28
NKX2-1-201ENST00000354822 J3KRW8 73 aa16.81■□□□□ 0.28
NKX2-1-201ENST00000354822 LAGE3Q14657 143 aa16.81■□□□□ 0.28
NKX2-1-201ENST00000354822 TMEM158Q8WZ71 300 aa16.81■□□□□ 0.28
NKX2-1-201ENST00000354822 C18orf15Q96N68 181 aa16.81■□□□□ 0.28
NKX2-1-201ENST00000354822 ATP5LO75964 103 aa16.81■□□□□ 0.28
NKX2-1-201ENST00000354822 RNASE4P34096 147 aaKnown RBP16.81■□□□□ 0.28
NKX2-1-201ENST00000354822 FGF6P10767 208 aa16.8■□□□□ 0.28
NKX2-1-201ENST00000354822 C2orf91Q6ZV80 131 aa16.8■□□□□ 0.28
NKX2-1-201ENST00000354822 BOD1L2Q8IYS8 172 aa16.8■□□□□ 0.28
NKX2-1-201ENST00000354822 PHLDA3Q9Y5J5 127 aa16.8■□□□□ 0.28
NKX2-1-201ENST00000354822 SPG11Q96JI7 2443 aa16.8■□□□□ 0.28
NKX2-1-201ENST00000354822 IGKV3-7A0A075B6H7 116 aa16.79■□□□□ 0.28
NKX2-1-201ENST00000354822 PRSS1P07477 247 aa16.79■□□□□ 0.28
NKX2-1-201ENST00000354822 ANXA2RQ3ZCQ2 193 aa16.79■□□□□ 0.28
NKX2-1-201ENST00000354822 SIVA1O15304 175 aa16.79■□□□□ 0.28
NKX2-1-201ENST00000354822 WFDC3Q8IUB2 231 aa16.79■□□□□ 0.28
NKX2-1-201ENST00000354822 ZMAT4Q9H898 229 aa16.79■□□□□ 0.28
NKX2-1-201ENST00000354822 DKK2Q9UBU2 259 aa16.79■□□□□ 0.28
NKX2-1-201ENST00000354822 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 TRAV26-2A0A0B4J265 109 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 TGFAP01135 160 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 OR9G4Q8NGQ1 327 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 MYOZ3Q8TDC0 251 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 DPH3P1Q9H4G8 78 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 F6UB75 175 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 CD5LO43866 347 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 SMIM17P0DL12 118 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 DEFB1P60022 68 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 ODF1Q14990 250 aa16.78■□□□□ 0.28
NKX2-1-201ENST00000354822 M0R381 172 aa16.77■□□□□ 0.28
NKX2-1-201ENST00000354822 TMEM95Q3KNT9 176 aa16.77■□□□□ 0.28
NKX2-1-201ENST00000354822 DCANP1Q8TF63 244 aa16.77■□□□□ 0.27
NKX2-1-201ENST00000354822 C20orf78Q9BR46 151 aa16.77■□□□□ 0.27
NKX2-1-201ENST00000354822 ZNF462Q96JM2 2506 aa16.76■□□□□ 0.27
NKX2-1-201ENST00000354822 UBE2V1Q13404 147 aa16.76■□□□□ 0.27
NKX2-1-201ENST00000354822 KLLNB2CW77 178 aa16.75■□□□□ 0.27
NKX2-1-201ENST00000354822 K7EMI3 77 aa16.75■□□□□ 0.27
NKX2-1-201ENST00000354822 PTTG1IPP53801 180 aa16.75■□□□□ 0.27
NKX2-1-201ENST00000354822 MYO18BQ8IUG5 2567 aa16.75■□□□□ 0.27
NKX2-1-201ENST00000354822 CELSR1Q9NYQ6 3014 aa16.75■□□□□ 0.27
NKX2-1-201ENST00000354822 TMEM97Q5BJF2 176 aa16.75■□□□□ 0.27
NKX2-1-201ENST00000354822 TAX1BP3O14907 124 aa16.74■□□□□ 0.27
NKX2-1-201ENST00000354822 PPP1R17O96001 155 aa16.74■□□□□ 0.27
NKX2-1-201ENST00000354822 SEC11AP67812 179 aa16.74■□□□□ 0.27
NKX2-1-201ENST00000354822 Q6ZVH6 145 aa16.74■□□□□ 0.27
NKX2-1-201ENST00000354822 SMIM2Q9BVW6 85 aa16.74■□□□□ 0.27
NKX2-1-201ENST00000354822 BEX4Q9NWD9 120 aaPredicted RBP16.74■□□□□ 0.27
NKX2-1-201ENST00000354822 IGKCP01834 107 aa16.74■□□□□ 0.27
NKX2-1-201ENST00000354822 SRD5A1P18405 259 aa16.74■□□□□ 0.27
NKX2-1-201ENST00000354822 KIR3DS1Q14943 382 aa16.74■□□□□ 0.27
NKX2-1-201ENST00000354822 GNRH2O43555 120 aa16.73■□□□□ 0.27
NKX2-1-201ENST00000354822 KRTAP10-9P60411 292 aa16.73■□□□□ 0.27
NKX2-1-201ENST00000354822 ORMDL2Q53FV1 153 aa16.73■□□□□ 0.27
NKX2-1-201ENST00000354822 VPREB3Q9UKI3 123 aa16.73■□□□□ 0.27
NKX2-1-201ENST00000354822 RNASE3P12724 160 aaKnown RBP16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 SUMO2P61956 95 aaKnown RBP16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 AP1S3Q96PC3 154 aa16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 FOXC2Q99958 501 aa16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 HHLA3Q9XRX5 114 aa16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 ZFYVE26Q68DK2 2539 aa16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 DPM2O94777 84 aa16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 FAM159AQ6UWV7 190 aa16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 C14orf178Q8N769 122 aaPredicted RBP16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 ODF3Q96PU9 254 aa16.72■□□□□ 0.27
NKX2-1-201ENST00000354822 RNF223E7ERA6 249 aa16.71■□□□□ 0.27
NKX2-1-201ENST00000354822 ELANEP08246 267 aa16.71■□□□□ 0.27
NKX2-1-201ENST00000354822 NMUP48645 174 aa16.71■□□□□ 0.27
NKX2-1-201ENST00000354822 MAPK1IP1LQ8NDC0 245 aa16.71■□□□□ 0.27
NKX2-1-201ENST00000354822 CCL25O15444 150 aa16.71■□□□□ 0.27
NKX2-1-201ENST00000354822 NXPH4O95158 308 aa16.71■□□□□ 0.27
NKX2-1-201ENST00000354822 Q6YL49 198 aa16.71■□□□□ 0.27
NKX2-1-201ENST00000354822 LRRC75A-AS1Q8N1F1 130 aa16.71■□□□□ 0.27
NKX2-1-201ENST00000354822 RASL10AQ92737 203 aa16.71■□□□□ 0.27
NKX2-1-201ENST00000354822 FSHBP01225 129 aa16.7■□□□□ 0.26
NKX2-1-201ENST00000354822 EDN2P20800 178 aa16.7■□□□□ 0.26
NKX2-1-201ENST00000354822 SNRPD3P62318 126 aaKnown RBP16.7■□□□□ 0.26
NKX2-1-201ENST00000354822 DEFB113Q30KQ7 82 aa16.7■□□□□ 0.26
NKX2-1-201ENST00000354822 POM121L12Q8N7R1 296 aa16.7■□□□□ 0.26
NKX2-1-201ENST00000354822 HSD52Q0P140 79 aa16.7■□□□□ 0.26
NKX2-1-201ENST00000354822 UBR5O95071 2799 aaPredicted RBP16.69■□□□□ 0.26
NKX2-1-201ENST00000354822 LGALS9O00182 355 aa16.69■□□□□ 0.26
NKX2-1-201ENST00000354822 VAMP3Q15836 100 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms