RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 CMTM2Q8TAZ6 248 aa9.77□□□□□ -0.85
PRPF40A-201ENST00000354363 TVP23CQ96ET8 276 aa9.77□□□□□ -0.85
PRPF40A-201ENST00000354363 WFDC1Q9HC57 220 aa9.77□□□□□ -0.85
PRPF40A-201ENST00000354363 VPS13BQ7Z7G8 4022 aa9.77□□□□□ -0.85
PRPF40A-201ENST00000354363 TRAV21A0A0B4J279 112 aa9.76□□□□□ -0.85
PRPF40A-201ENST00000354363 F6UZH7 168 aa9.76□□□□□ -0.85
PRPF40A-201ENST00000354363 TYMSP04818 313 aa9.76□□□□□ -0.85
PRPF40A-201ENST00000354363 FAM74A1Q5RGS3 127 aa9.76□□□□□ -0.85
PRPF40A-201ENST00000354363 PQLC2Q6ZP29 291 aa9.76□□□□□ -0.85
PRPF40A-201ENST00000354363 ARL6IP6Q8N6S5 226 aa9.76□□□□□ -0.85
PRPF40A-201ENST00000354363 TRAV8-1A0A0A6YYK1 113 aa9.75□□□□□ -0.85
PRPF40A-201ENST00000354363 SSNA1O43805 119 aa9.75□□□□□ -0.85
PRPF40A-201ENST00000354363 CRYGDP07320 174 aa9.75□□□□□ -0.85
PRPF40A-201ENST00000354363 ACOT6Q3I5F7 207 aaPredicted RBP9.75□□□□□ -0.85
PRPF40A-201ENST00000354363 GATA1P15976 413 aaPredicted RBP9.74□□□□□ -0.85
PRPF40A-201ENST00000354363 RAB2AP61019 212 aa9.74□□□□□ -0.85
PRPF40A-201ENST00000354363 C10orf126Q8N4M7 172 aa9.74□□□□□ -0.85
PRPF40A-201ENST00000354363 TREM1Q9NP99 234 aa9.74□□□□□ -0.85
PRPF40A-201ENST00000354363 A0A1W2PPV4 95 aa9.74□□□□□ -0.85
PRPF40A-201ENST00000354363 TIRAPP58753 221 aa9.74□□□□□ -0.85
PRPF40A-201ENST00000354363 GNG5P63218 68 aa9.74□□□□□ -0.85
PRPF40A-201ENST00000354363 SH2D6Q7Z4S9 175 aa9.74□□□□□ -0.85
PRPF40A-201ENST00000354363 SDF2L1Q9HCN8 221 aa9.74□□□□□ -0.85
PRPF40A-201ENST00000354363 HERC1Q15751 4861 aa9.73□□□□□ -0.85
PRPF40A-201ENST00000354363 INAFM2P0DMQ5 153 aa9.73□□□□□ -0.85
PRPF40A-201ENST00000354363 LCE2DQ5TA82 110 aaPredicted RBP9.73□□□□□ -0.85
PRPF40A-201ENST00000354363 NHLRC2Q8NBF2 726 aa9.73□□□□□ -0.85
PRPF40A-201ENST00000354363 KCNS1Q96KK3 526 aa9.73□□□□□ -0.85
PRPF40A-201ENST00000354363 HMGB3O15347 200 aaKnown RBP9.72□□□□□ -0.85
PRPF40A-201ENST00000354363 Q5VSD8 79 aa9.72□□□□□ -0.85
PRPF40A-201ENST00000354363 ASB13Q8WXK3 278 aa9.72□□□□□ -0.85
PRPF40A-201ENST00000354363 SGK494Q96LW2 274 aa9.72□□□□□ -0.85
PRPF40A-201ENST00000354363 IGHV3-38A0A0C4DH36 116 aa9.71□□□□□ -0.85
PRPF40A-201ENST00000354363 FBLL1A6NHQ2 334 aaKnown RBP9.71□□□□□ -0.85
PRPF40A-201ENST00000354363 GCSHP23434 173 aa9.71□□□□□ -0.85
PRPF40A-201ENST00000354363 PPT1P50897 306 aa9.71□□□□□ -0.85
PRPF40A-201ENST00000354363 OR10G9Q8NGN4 311 aa9.71□□□□□ -0.85
PRPF40A-201ENST00000354363 OR10G7Q8NGN6 311 aa9.71□□□□□ -0.85
PRPF40A-201ENST00000354363 ARL14EPLP0DKL9 152 aa9.71□□□□□ -0.86
PRPF40A-201ENST00000354363 ZNF80P51504 273 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-201ENST00000354363 LINC01556Q5JQF7 62 aa9.71□□□□□ -0.86
PRPF40A-201ENST00000354363 DPPA3Q6W0C5 159 aa9.71□□□□□ -0.86
PRPF40A-201ENST00000354363 SLC25A29Q8N8R3 303 aa9.71□□□□□ -0.86
PRPF40A-201ENST00000354363 FRZBQ92765 325 aa9.71□□□□□ -0.86
PRPF40A-201ENST00000354363 C11orf21Q9P2W6 132 aa9.71□□□□□ -0.86
PRPF40A-201ENST00000354363 LRCOL1A6NCL2 159 aa9.7□□□□□ -0.86
PRPF40A-201ENST00000354363 RS1O15537 224 aa9.7□□□□□ -0.86
PRPF40A-201ENST00000354363 CDC34P49427 236 aaPredicted RBP9.7□□□□□ -0.86
PRPF40A-201ENST00000354363 DEFA1P59665 94 aa9.7□□□□□ -0.86
PRPF40A-201ENST00000354363 DEFA3P59666 94 aa9.7□□□□□ -0.86
PRPF40A-201ENST00000354363 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
PRPF40A-201ENST00000354363 NDFIP1Q9BT67 221 aa9.7□□□□□ -0.86
PRPF40A-201ENST00000354363 SERTM2A0A1B0GWG4 89 aa9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 A6NHS1 94 aa9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 IBA57-AS1B1ANH7 110 aa9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 PSCAO43653 123 aa9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 PFN1P07737 140 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 STAG3L2P0CL84 134 aa9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 STAG3L3P0CL85 134 aa9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 CFAP126Q5VTH2 177 aa9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 C5orf17Q8NAS9 161 aa9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 DNAH8Q96JB1 4490 aa9.69□□□□□ -0.86
PRPF40A-201ENST00000354363 TRAV8-6A0A0B4J262 113 aa9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 CIDEAO60543 219 aa9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 SMR3BP02814 79 aaPredicted RBP9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 TCRAP04437 139 aa9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 RHOHQ15669 191 aa9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 OR10J3Q5JRS4 329 aa9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 OR2G3Q8NGZ4 309 aa9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 SUN5Q8TC36 379 aa9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 PRADC1Q9BSG0 188 aa9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 FLG2Q5D862 2391 aaPredicted RBP9.68□□□□□ -0.86
PRPF40A-201ENST00000354363 IGLV5-52A0A0A0MRZ9 124 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 IGHV3-73A0A0B4J1V6 119 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 TRBV6-4A0A1B0GX49 114 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 TAAR5O14804 337 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 GCGP01275 180 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 GCHFRP30047 84 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 TMEM75Q8N9X5 138 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 RAB24Q969Q5 203 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 PSG8Q9UQ74 426 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 DMBT1Q9UGM3 2413 aaPredicted RBP9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 PGPEP1LA6NFU8 196 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 IGLV2-11P01706 119 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 HAMPP81172 84 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 ZNF506Q5JVG8 444 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 LELP1Q5T871 98 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 HSD17B11Q8NBQ5 300 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 NTN5Q8WTR8 489 aaPredicted RBP9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 Q9HAA7 133 aa9.67□□□□□ -0.86
PRPF40A-201ENST00000354363 K7EQM0 130 aa9.66□□□□□ -0.86
PRPF40A-201ENST00000354363 IGHV3-30P01768 117 aa9.66□□□□□ -0.86
PRPF40A-201ENST00000354363 IGHV3-33P01772 117 aa9.66□□□□□ -0.86
PRPF40A-201ENST00000354363 IGHV3-30-3P0DP02 117 aa9.66□□□□□ -0.86
PRPF40A-201ENST00000354363 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
PRPF40A-201ENST00000354363 FLI1Q01543 452 aaPredicted RBP9.66□□□□□ -0.86
PRPF40A-201ENST00000354363 PTH2Q96A98 100 aa9.66□□□□□ -0.86
PRPF40A-201ENST00000354363 PSMG3Q9BT73 122 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms