RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 C12orf74Q32Q52 190 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 C1orf159Q96HA4 380 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 TMEM101Q96IK0 257 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 C20orf78Q9BR46 151 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 OVOL3O00110 214 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 ELANEP08246 267 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 ZNF493Q6ZR52 646 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 BOD1L2Q8IYS8 172 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 H3BMG7 143 aa11.49□□□□□ -0.57
NUP50-201ENST00000347635 LINC00310P59036 64 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 SPATA12Q7Z6I5 190 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 MRPL53Q96EL3 112 aaKnown RBP11.48□□□□□ -0.57
NUP50-201ENST00000347635 TRBV25-1A0A075B6N4 114 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 IGKV3D-20A0A0C4DH25 116 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 MAPK1IP1LQ8NDC0 245 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 AKAP6Q13023 2319 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 IGHV4-61A0A0C4DH41 118 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 FSTL3O95633 263 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 ATXN8Q156A1 80 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 MED13Q9UHV7 2174 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 CTSGP08311 255 aa11.48□□□□□ -0.57
NUP50-201ENST00000347635 M0R2P5 195 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 NDUFA4O00483 81 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 FOXE3Q13461 319 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 ZFAND6Q6FIF0 208 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 IGKV3OR2-268A0A0C4DH90 116 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 SPINK8P0C7L1 97 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 C10orf126Q8N4M7 172 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 IGHV3-73A0A0B4J1V6 119 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 DNAL4O96015 105 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 EXPH5Q8NEV8 1989 aa11.47□□□□□ -0.57
NUP50-201ENST00000347635 MYCNOSP40205 109 aa11.46□□□□□ -0.57
NUP50-201ENST00000347635 LRRC75A-AS1Q8N1F1 130 aa11.46□□□□□ -0.57
NUP50-201ENST00000347635 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
NUP50-201ENST00000347635 TRPT1Q86TN4 253 aaKnown RBP11.46□□□□□ -0.57
NUP50-201ENST00000347635 VPREB3Q9UKI3 123 aa11.46□□□□□ -0.57
NUP50-201ENST00000347635 IGHV4-30-2A0A087WSY4 118 aa11.46□□□□□ -0.58
NUP50-201ENST00000347635 LINC01619G3V211 115 aa11.46□□□□□ -0.58
NUP50-201ENST00000347635 C1QTNF4Q9BXJ3 329 aa11.46□□□□□ -0.58
NUP50-201ENST00000347635 NEGR1Q7Z3B1 354 aa11.46□□□□□ -0.58
NUP50-201ENST00000347635 TP73-AS1Q9UF72 201 aa11.46□□□□□ -0.58
NUP50-201ENST00000347635 TRBV20-1A0A075B6N2 111 aa11.45□□□□□ -0.58
NUP50-201ENST00000347635 IGHV7-81A0A0B4J1V7 117 aa11.45□□□□□ -0.58
NUP50-201ENST00000347635 UTRNP46939 3433 aa11.45□□□□□ -0.58
NUP50-201ENST00000347635 AMTNQ6UX39 209 aa11.45□□□□□ -0.58
NUP50-201ENST00000347635 HIGD1BQ9P298 99 aa11.45□□□□□ -0.58
NUP50-201ENST00000347635 TIMM21Q9BVV7 248 aa11.45□□□□□ -0.58
NUP50-201ENST00000347635 NPC2P61916 151 aa11.44□□□□□ -0.58
NUP50-201ENST00000347635 C3orf56Q8N813 242 aa11.44□□□□□ -0.58
NUP50-201ENST00000347635 SDHAF1A6NFY7 115 aa11.44□□□□□ -0.58
NUP50-201ENST00000347635 K7EMI3 77 aa11.44□□□□□ -0.58
NUP50-201ENST00000347635 LOXL1Q08397 574 aaPredicted RBP11.44□□□□□ -0.58
NUP50-201ENST00000347635 GAGE2BQ13066 116 aa11.44□□□□□ -0.58
NUP50-201ENST00000347635 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
NUP50-201ENST00000347635 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
NUP50-201ENST00000347635 C9JAW5 83 aa11.44□□□□□ -0.58
NUP50-201ENST00000347635 IGLL5B9A064 214 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 AZU1P20160 251 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 FXYD2P54710 66 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 LENEPQ9Y5L5 61 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 PIEZO1Q92508 2521 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 SPXQ9BT56 116 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 TRGV2A0A075B6R0 118 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 CENPVL3A0A0U1RRI6 287 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 BUB3O43684 328 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 PPDPFLQ8WWR9 84 aa11.43□□□□□ -0.58
NUP50-201ENST00000347635 ZNF48Q96MX3 618 aaPredicted RBP11.43□□□□□ -0.58
NUP50-201ENST00000347635 PRSS29PA6NIE9 313 aa11.42□□□□□ -0.58
NUP50-201ENST00000347635 PRAC2D3DTV9 90 aa11.42□□□□□ -0.58
NUP50-201ENST00000347635 DEFB112Q30KQ8 113 aa11.42□□□□□ -0.58
NUP50-201ENST00000347635 Q8N976 141 aa11.42□□□□□ -0.58
NUP50-201ENST00000347635 SRSF2Q01130 221 aaKnown RBP11.42□□□□□ -0.58
NUP50-201ENST00000347635 OR13C6PQ8NH95 151 aa11.42□□□□□ -0.58
NUP50-201ENST00000347635 TTTY13Q9BZ97 58 aa11.42□□□□□ -0.58
NUP50-201ENST00000347635 TEX48A0A1B0GUV7 120 aa11.42□□□□□ -0.58
NUP50-201ENST00000347635 C2orf82Q6UX34 121 aa11.42□□□□□ -0.58
NUP50-201ENST00000347635 MALRD1Q5VYJ5 2156 aa11.41□□□□□ -0.58
NUP50-201ENST00000347635 ODF1Q14990 250 aa11.41□□□□□ -0.58
NUP50-201ENST00000347635 SYNJ2BPP57105 145 aa11.41□□□□□ -0.58
NUP50-201ENST00000347635 ZNF415Q09FC8 603 aa11.41□□□□□ -0.58
NUP50-201ENST00000347635 C22orf34Q6ZV56 151 aa11.41□□□□□ -0.58
NUP50-201ENST00000347635 I3L3M4 83 aa11.41□□□□□ -0.58
NUP50-201ENST00000347635 LY6G5BQ8NDX9 201 aa11.41□□□□□ -0.58
NUP50-201ENST00000347635 CRYGBP07316 175 aa11.4□□□□□ -0.58
NUP50-201ENST00000347635 FOXI2Q6ZQN5 318 aa11.4□□□□□ -0.58
NUP50-201ENST00000347635 TOMM7Q9P0U1 55 aa11.4□□□□□ -0.58
NUP50-201ENST00000347635 COL4A2P08572 1712 aa11.4□□□□□ -0.58
NUP50-201ENST00000347635 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
NUP50-201ENST00000347635 GNRH2O43555 120 aa11.4□□□□□ -0.59
NUP50-201ENST00000347635 KLK9Q9UKQ9 250 aa11.39□□□□□ -0.59
NUP50-201ENST00000347635 DYSFO75923 2080 aa11.39□□□□□ -0.59
NUP50-201ENST00000347635 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
NUP50-201ENST00000347635 A0A0U1RRA0 63 aa11.39□□□□□ -0.59
NUP50-201ENST00000347635 MORN3Q6PF18 240 aaPredicted RBP11.39□□□□□ -0.59
NUP50-201ENST00000347635 PRO1854Q9UHT4 67 aa11.39□□□□□ -0.59
NUP50-201ENST00000347635 Q8N9W7 124 aa11.39□□□□□ -0.59
NUP50-201ENST00000347635 RPL39LQ96EH5 51 aaKnown RBP11.39□□□□□ -0.59
NUP50-201ENST00000347635 SPINK13Q1W4C9 94 aa11.38□□□□□ -0.59
NUP50-201ENST00000347635 ZNF843Q8N446 348 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms