RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CMC4P56277 68 aaPredicted RBP15.93■□□□□ 0.14
TSPAN3-202ENST00000346495 GATD1Q8NB37 220 aa15.93■□□□□ 0.14
TSPAN3-202ENST00000346495 NAGKQ9UJ70 344 aa15.93■□□□□ 0.14
TSPAN3-202ENST00000346495 H3BMM0 161 aa15.92■□□□□ 0.14
TSPAN3-202ENST00000346495 UBE2CO00762 179 aa15.92■□□□□ 0.14
TSPAN3-202ENST00000346495 SLAQ13239 276 aa15.92■□□□□ 0.14
TSPAN3-202ENST00000346495 AMTNQ6UX39 209 aa15.92■□□□□ 0.14
TSPAN3-202ENST00000346495 WNK1Q9H4A3 2382 aa15.92■□□□□ 0.14
TSPAN3-202ENST00000346495 HOXA5P20719 270 aa15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 ANXA2RQ3ZCQ2 193 aa15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 SSBP4Q9BWG4 385 aaPredicted RBP15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 CNFNQ9BYD5 112 aa15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 SETD2Q9BYW2 2564 aaPredicted RBP15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 M0R2Z0 102 aa15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 SPINK13Q1W4C9 94 aa15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 ODF3L2Q3SX64 289 aa15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 KIAA1644Q3SXP7 199 aa15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 COA6Q5JTJ3 125 aaKnown RBP15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 GFI1BQ5VTD9 330 aa15.9■□□□□ 0.14
TSPAN3-202ENST00000346495 TRAV12-3A0A0B4J271 114 aa15.89■□□□□ 0.13
TSPAN3-202ENST00000346495 OR11H12B2RN74 326 aa15.89■□□□□ 0.13
TSPAN3-202ENST00000346495 ZNF124Q15973 351 aa15.89■□□□□ 0.13
TSPAN3-202ENST00000346495 MUC21Q5SSG8 566 aa15.89■□□□□ 0.13
TSPAN3-202ENST00000346495 ZNF324O75467 553 aaPredicted RBP15.88■□□□□ 0.13
TSPAN3-202ENST00000346495 OR5AL1P0C617 328 aa15.88■□□□□ 0.13
TSPAN3-202ENST00000346495 FAM159AQ6UWV7 190 aa15.88■□□□□ 0.13
TSPAN3-202ENST00000346495 CLUHP3Q96NS8 147 aa15.88■□□□□ 0.13
TSPAN3-202ENST00000346495 AGRNO00468 2067 aa15.88■□□□□ 0.13
TSPAN3-202ENST00000346495 SNAI2O43623 268 aa15.87■□□□□ 0.13
TSPAN3-202ENST00000346495 ASIPP42127 132 aa15.87■□□□□ 0.13
TSPAN3-202ENST00000346495 TWIST1Q15672 202 aa15.87■□□□□ 0.13
TSPAN3-202ENST00000346495 DNLZQ5SXM8 178 aa15.87■□□□□ 0.13
TSPAN3-202ENST00000346495 ZNF493Q6ZR52 646 aa15.87■□□□□ 0.13
TSPAN3-202ENST00000346495 KCNS1Q96KK3 526 aa15.87■□□□□ 0.13
TSPAN3-202ENST00000346495 TRAV12-2A0A075B6T6 113 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 MUC21A0A0G2JKD1 596 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 MUC21A0A140T8X8 626 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 MED14OSP0DP75 135 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 NTF3P20783 257 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 S100A4P26447 101 aaKnown RBP15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 SRIP30626 198 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 SSTP61278 116 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 CACNG7P62955 275 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 BEAN1Q3B7T3 259 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 FAM110AQ9BQ89 295 aa15.86■□□□□ 0.13
TSPAN3-202ENST00000346495 RBMY1BA6NDE4 496 aaKnown RBP15.85■□□□□ 0.13
TSPAN3-202ENST00000346495 RBMY1EA6NEQ0 496 aaKnown RBP15.85■□□□□ 0.13
TSPAN3-202ENST00000346495 RBMY1DP0C7P1 496 aaKnown RBP15.85■□□□□ 0.13
TSPAN3-202ENST00000346495 Q0VG73 95 aa15.85■□□□□ 0.13
TSPAN3-202ENST00000346495 KRTAP24-1Q3LI83 254 aa15.85■□□□□ 0.13
TSPAN3-202ENST00000346495 SORL1Q92673 2214 aa15.85■□□□□ 0.13
TSPAN3-202ENST00000346495 LOC102724200A0A096LPH7 203 aaPredicted RBP15.84■□□□□ 0.13
TSPAN3-202ENST00000346495 H3BVH4 76 aa15.84■□□□□ 0.13
TSPAN3-202ENST00000346495 INSL3P51460 131 aa15.84■□□□□ 0.13
TSPAN3-202ENST00000346495 TDRG1Q3Y452 100 aa15.84■□□□□ 0.13
TSPAN3-202ENST00000346495 FXYD7P58549 80 aa15.83■□□□□ 0.13
TSPAN3-202ENST00000346495 OR10J3Q5JRS4 329 aa15.83■□□□□ 0.13
TSPAN3-202ENST00000346495 C9orf66Q5T8R8 295 aa15.83■□□□□ 0.13
TSPAN3-202ENST00000346495 STHQ8IWL8 128 aa15.83■□□□□ 0.13
TSPAN3-202ENST00000346495 HIST3H2BBQ8N257 126 aa15.83■□□□□ 0.13
TSPAN3-202ENST00000346495 IGHV4-4A0A075B6R2 117 aa15.83■□□□□ 0.12
TSPAN3-202ENST00000346495 GNRH2O43555 120 aa15.83■□□□□ 0.12
TSPAN3-202ENST00000346495 OR10AG1Q8NH19 301 aa15.83■□□□□ 0.12
TSPAN3-202ENST00000346495 ALKBH7Q9BT30 221 aaPredicted RBP15.83■□□□□ 0.12
TSPAN3-202ENST00000346495 PRR31Q5SQ13 230 aa15.82■□□□□ 0.12
TSPAN3-202ENST00000346495 SPANXN1Q5VSR9 72 aa15.82■□□□□ 0.12
TSPAN3-202ENST00000346495 TMEM191AQ9H0A3 160 aa15.82■□□□□ 0.12
TSPAN3-202ENST00000346495 IGHV1OR15-1A0A075B7D0 117 aa15.81■□□□□ 0.12
TSPAN3-202ENST00000346495 CRXO43186 299 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-202ENST00000346495 AMBPP02760 352 aa15.81■□□□□ 0.12
TSPAN3-202ENST00000346495 BAGE3Q86Y29 109 aa15.81■□□□□ 0.12
TSPAN3-202ENST00000346495 SCRT2Q9NQ03 307 aa15.81■□□□□ 0.12
TSPAN3-202ENST00000346495 MSRB1Q9NZV6 116 aa15.81■□□□□ 0.12
TSPAN3-202ENST00000346495 TIMM8BQ9Y5J9 83 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-202ENST00000346495 CD7P09564 240 aa15.8■□□□□ 0.12
TSPAN3-202ENST00000346495 S100A2P29034 98 aa15.8■□□□□ 0.12
TSPAN3-202ENST00000346495 FAM104BQ5XKR9 115 aa15.8■□□□□ 0.12
TSPAN3-202ENST00000346495 TRPT1Q86TN4 253 aaKnown RBP15.8■□□□□ 0.12
TSPAN3-202ENST00000346495 RNASE3P12724 160 aaKnown RBP15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 AKR1D1P51857 326 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 PDZD11Q5EBL8 140 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 TP53TG3Q9ULZ0 132 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 PHLDA3Q9Y5J5 127 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 DMRTA1Q5VZB9 504 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 SMIM15Q7Z3B0 74 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 AMN1Q8IY45 258 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 TMEM256Q8N2U0 113 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 C18orf32Q8TCD1 76 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 MCRIP2Q9BUT9 160 aaKnown RBP15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 ZNF747Q9BV97 191 aa15.79■□□□□ 0.12
TSPAN3-202ENST00000346495 C20orf144Q9BQM9 153 aa15.78■□□□□ 0.12
TSPAN3-202ENST00000346495 C19orf73Q9NVV2 129 aa15.78■□□□□ 0.12
TSPAN3-202ENST00000346495 IFITM10A6NMD0 228 aa15.77■□□□□ 0.12
TSPAN3-202ENST00000346495 TRGV11A0A075B6L2 103 aa15.76■□□□□ 0.11
TSPAN3-202ENST00000346495 IGHV3-16A0A0C4DH30 117 aa15.76■□□□□ 0.11
TSPAN3-202ENST00000346495 INSP01308 110 aa15.76■□□□□ 0.11
TSPAN3-202ENST00000346495 RBMY1A1P0DJD3 496 aaKnown RBP15.76■□□□□ 0.11
TSPAN3-202ENST00000346495 RBMY1CP0DJD4 496 aa15.76■□□□□ 0.11
TSPAN3-202ENST00000346495 NUTF2P61970 127 aaKnown RBP15.76■□□□□ 0.11
TSPAN3-202ENST00000346495 RBMY1FQ15415 496 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms