RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 BLOC1S1P78537 153 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TMEM183BQ1AE95 376 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TMEM183AQ8IXX5 376 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 LINC00612Q8N6U2 182 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 LINC00476Q8WZB0 136 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 FAM210BQ96KR6 192 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 SDF2L1Q9HCN8 221 aa10.93□□□□□ -0.66
TNFRSF12A-202ENST00000341627 GAGE12BA1L429 117 aa10.92□□□□□ -0.66
TNFRSF12A-202ENST00000341627 GAGE7O76087 117 aa10.92□□□□□ -0.66
TNFRSF12A-202ENST00000341627 GAGE12FP0CL80 117 aa10.92□□□□□ -0.66
TNFRSF12A-202ENST00000341627 GAGE12GP0CL81 117 aa10.92□□□□□ -0.66
TNFRSF12A-202ENST00000341627 GAGE12IP0CL82 117 aa10.92□□□□□ -0.66
TNFRSF12A-202ENST00000341627 ZNF80P51504 273 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
TNFRSF12A-202ENST00000341627 SCO2A0A1W2PP80 73 aa10.91□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TAGLN2P37802 199 aaKnown RBP10.91□□□□□ -0.66
TNFRSF12A-202ENST00000341627 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
TNFRSF12A-202ENST00000341627 Q6ZTI0 123 aa10.91□□□□□ -0.66
TNFRSF12A-202ENST00000341627 NDUFAF3Q9BU61 184 aa10.91□□□□□ -0.66
TNFRSF12A-202ENST00000341627 TRGV2A0A075B6R0 118 aa10.9□□□□□ -0.66
TNFRSF12A-202ENST00000341627 FABP5P3A8MUU1 101 aa10.9□□□□□ -0.66
TNFRSF12A-202ENST00000341627 F5H768 121 aa10.9□□□□□ -0.66
TNFRSF12A-202ENST00000341627 SPINK4O60575 86 aa10.9□□□□□ -0.66
TNFRSF12A-202ENST00000341627 LTAP01374 205 aa10.9□□□□□ -0.66
TNFRSF12A-202ENST00000341627 SPXQ9BT56 116 aa10.9□□□□□ -0.66
TNFRSF12A-202ENST00000341627 MDFICQ9P1T7 246 aa10.9□□□□□ -0.66
TNFRSF12A-202ENST00000341627 APLNQ9ULZ1 77 aa10.9□□□□□ -0.66
TNFRSF12A-202ENST00000341627 VPS13DQ5THJ4 4388 aa10.89□□□□□ -0.67
TNFRSF12A-202ENST00000341627 GNRH2O43555 120 aa10.89□□□□□ -0.67
TNFRSF12A-202ENST00000341627 TYMSP04818 313 aa10.89□□□□□ -0.67
TNFRSF12A-202ENST00000341627 BCL2P10415 239 aa10.89□□□□□ -0.67
TNFRSF12A-202ENST00000341627 MEF2BQ02080 365 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF12A-202ENST00000341627 COX8CQ7Z4L0 72 aa10.89□□□□□ -0.67
TNFRSF12A-202ENST00000341627 C11orf52Q96A22 123 aa10.89□□□□□ -0.67
TNFRSF12A-202ENST00000341627 C18orf15Q96N68 181 aa10.89□□□□□ -0.67
TNFRSF12A-202ENST00000341627 KMT2AQ03164 3969 aa10.89□□□□□ -0.67
TNFRSF12A-202ENST00000341627 IGHV3-16A0A0C4DH30 117 aa10.88□□□□□ -0.67
TNFRSF12A-202ENST00000341627 PDE6DO43924 150 aa10.88□□□□□ -0.67
TNFRSF12A-202ENST00000341627 LY6G6CO95867 125 aa10.88□□□□□ -0.67
TNFRSF12A-202ENST00000341627 FAM162BQ5T6X4 162 aa10.88□□□□□ -0.67
TNFRSF12A-202ENST00000341627 ZC2HC1AQ96GY0 325 aa10.88□□□□□ -0.67
TNFRSF12A-202ENST00000341627 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
TNFRSF12A-202ENST00000341627 VAX2Q9UIW0 290 aa10.88□□□□□ -0.67
TNFRSF12A-202ENST00000341627 LGALS9CQ6DKI2 356 aa10.87□□□□□ -0.67
TNFRSF12A-202ENST00000341627 TMEM88Q6PEY1 159 aa10.87□□□□□ -0.67
TNFRSF12A-202ENST00000341627 BAGE2Q86Y30 109 aa10.87□□□□□ -0.67
TNFRSF12A-202ENST00000341627 C11orf21Q9P2W6 132 aa10.87□□□□□ -0.67
TNFRSF12A-202ENST00000341627 BIRC6Q9NR09 4857 aa10.86□□□□□ -0.67
TNFRSF12A-202ENST00000341627 M0R2P5 195 aa10.86□□□□□ -0.67
TNFRSF12A-202ENST00000341627 RPL35P42766 123 aaKnown RBP10.86□□□□□ -0.67
TNFRSF12A-202ENST00000341627 C15orf53Q8NAA6 179 aa10.86□□□□□ -0.67
TNFRSF12A-202ENST00000341627 SH2D1AO60880 128 aa10.85□□□□□ -0.67
TNFRSF12A-202ENST00000341627 ORM1P02763 201 aa10.85□□□□□ -0.67
TNFRSF12A-202ENST00000341627 CRIP1P50238 77 aa10.85□□□□□ -0.67
TNFRSF12A-202ENST00000341627 OR5I1Q13606 314 aa10.85□□□□□ -0.67
TNFRSF12A-202ENST00000341627 ZNF674Q2M3X9 581 aa10.85□□□□□ -0.67
TNFRSF12A-202ENST00000341627 NHLRC2Q8NBF2 726 aa10.85□□□□□ -0.67
TNFRSF12A-202ENST00000341627 LYPD6BQ8NI32 183 aa10.85□□□□□ -0.67
TNFRSF12A-202ENST00000341627 RASL10AQ92737 203 aa10.85□□□□□ -0.67
TNFRSF12A-202ENST00000341627 MED9Q9NWA0 146 aa10.85□□□□□ -0.67
TNFRSF12A-202ENST00000341627 IGKV3D-20A0A0C4DH25 116 aa10.84□□□□□ -0.67
TNFRSF12A-202ENST00000341627 S100A4P26447 101 aaKnown RBP10.84□□□□□ -0.67
TNFRSF12A-202ENST00000341627 B4DEV8 164 aa10.83□□□□□ -0.68
TNFRSF12A-202ENST00000341627 M0R036 132 aa10.83□□□□□ -0.68
TNFRSF12A-202ENST00000341627 P0DMU3 169 aa10.83□□□□□ -0.68
TNFRSF12A-202ENST00000341627 FAM231AP0DMU4 169 aa10.83□□□□□ -0.68
TNFRSF12A-202ENST00000341627 FAM231CP0DMU5 169 aa10.83□□□□□ -0.68
TNFRSF12A-202ENST00000341627 ASIPP42127 132 aa10.83□□□□□ -0.68
TNFRSF12A-202ENST00000341627 DERL1Q9BUN8 251 aa10.83□□□□□ -0.68
TNFRSF12A-202ENST00000341627 MLST8Q9BVC4 326 aa10.83□□□□□ -0.68
TNFRSF12A-202ENST00000341627 TRAV26-1A0A087WT03 109 aa10.82□□□□□ -0.68
TNFRSF12A-202ENST00000341627 RBFOX3A6NFN3 312 aa10.82□□□□□ -0.68
TNFRSF12A-202ENST00000341627 HOXA5P20719 270 aa10.82□□□□□ -0.68
TNFRSF12A-202ENST00000341627 GNG4P50150 75 aa10.82□□□□□ -0.68
TNFRSF12A-202ENST00000341627 CENPWQ5EE01 88 aa10.82□□□□□ -0.68
TNFRSF12A-202ENST00000341627 TEX261Q6UWH6 196 aa10.82□□□□□ -0.68
TNFRSF12A-202ENST00000341627 SMIM12Q96EX1 92 aa10.82□□□□□ -0.68
TNFRSF12A-202ENST00000341627 C9orf85Q96MD7 179 aa10.82□□□□□ -0.68
TNFRSF12A-202ENST00000341627 KRBOX1C9JBD0 128 aa10.81□□□□□ -0.68
TNFRSF12A-202ENST00000341627 NUDT3O95989 172 aa10.81□□□□□ -0.68
TNFRSF12A-202ENST00000341627 IGHV3-53P01767 116 aa10.81□□□□□ -0.68
TNFRSF12A-202ENST00000341627 RNASE3P12724 160 aaKnown RBP10.81□□□□□ -0.68
TNFRSF12A-202ENST00000341627 SLAQ13239 276 aa10.81□□□□□ -0.68
TNFRSF12A-202ENST00000341627 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
TNFRSF12A-202ENST00000341627 RAB19A4D1S5 217 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 C9JCJ5 164 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 H3BNG1 76 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 ZNF876PQ49A33 203 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 ZNF506Q5JVG8 444 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 DNLZQ5SXM8 178 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 PRR27Q6MZM9 219 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 OR4C5Q8NGB2 326 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 PTH2Q96A98 100 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 IL36BQ9NZH7 164 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 MUC4Q99102 2169 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 DNAH10Q8IVF4 4471 aa10.8□□□□□ -0.68
TNFRSF12A-202ENST00000341627 TMSB15BA0A087X1C1 80 aa10.79□□□□□ -0.68
TNFRSF12A-202ENST00000341627 TRAV4A0A0B4J268 109 aa10.79□□□□□ -0.68
TNFRSF12A-202ENST00000341627 TRGV4A0A0C4DH28 118 aa10.79□□□□□ -0.68
TNFRSF12A-202ENST00000341627 A0A0J9YY99 117 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms