RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 GNRH2O43555 120 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 CENPWQ5EE01 88 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 PCSK4Q6UW60 755 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 SLC25A20O43772 301 aa2.86□□□□□ -1.95
SYNE1-201ENST00000341594 MRPL33O75394 65 aaKnown RBP2.86□□□□□ -1.95
SYNE1-201ENST00000341594 C3orf79P0CE67 100 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 BAALCQ8WXS3 180 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM89A2RUT3 159 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 CARD19Q96LW7 228 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 C1orf147Q96MC9 270 aaPredicted RBP2.85□□□□□ -1.95
SYNE1-201ENST00000341594 CRYGSP22914 178 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 E9PLD3 99 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 ZFP36L1Q07352 338 aaKnown RBP2.85□□□□□ -1.95
SYNE1-201ENST00000341594 NDUFS5O43920 106 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 CTSGP08311 255 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 IDI2-AS1Q9NZ38 188 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 GCSAMQ8N6F7 178 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 ZNRF2Q8NHG8 242 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 TRBV20OR9-2A0A075B6H5 130 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 LMO7DNF2Z398 122 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 LAMTOR5O43504 91 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 CFAP46Q8IYW2 2715 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 IGHV4-28A0A0C4DH34 117 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 ZNF32P17041 273 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 IGHG2P01859 326 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 A0A0G2JRQ6 117 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 UBE2BP63146 152 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 DEFB116Q30KQ4 102 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM178AQ8NBL3 297 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM54Q969K7 222 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 ELSPBP1Q96BH3 223 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 SOCS3O14543 225 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 C10orf55Q5SWW7 151 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 DPH3P1Q9H4G8 78 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 IGKCP01834 107 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 RRN3P1Q2M238 152 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 C10orf105Q8TEF2 133 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 U3KQK5 164 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 RNASE2P10153 161 aaKnown RBP2.85□□□□□ -1.95
SYNE1-201ENST00000341594 MUC7Q8TAX7 377 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 VWCEQ96DN2 955 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 SCGB3A1Q96QR1 104 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 TOMM7Q9P0U1 55 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 SETXQ7Z333 2677 aaKnown RBP2.85□□□□□ -1.95
SYNE1-201ENST00000341594 P0C879 139 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 IGHV4-30-4P0DP06 118 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 IGHV4-31P0DP07 118 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 ZNF497Q6ZNH5 498 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 OTORQ9NRC9 128 aa2.85□□□□□ -1.95
SYNE1-201ENST00000341594 C2orf83Q53S99 150 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 ZFP2Q6ZN57 461 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 RFPL3SP0C7P2 107 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 NUP35Q8NFH5 326 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 UBL5Q9BZL1 73 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 TEX48A0A1B0GUV7 120 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 A0A1W2PS18 150 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 FUSP35637 526 aaKnown RBP eCLIP2.84□□□□□ -1.95
SYNE1-201ENST00000341594 ARRDC1-AS1Q9H2J1 176 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 HRCT1Q6UXD1 115 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 PROCRQ9UNN8 238 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 FAM120AOSQ5T036 256 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 PCP2Q8IVA1 136 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 IGF1P05019 195 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 WT1P19544 449 aaPredicted RBP2.84□□□□□ -1.95
SYNE1-201ENST00000341594 TRGV9Q99603 122 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 PRORYQ9H606 182 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 PSG8Q9UQ74 426 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 ELANEP08246 267 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 IGKV1-8A0A0C4DH67 115 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 FOXI1Q12951 378 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 VKORC1Q9BQB6 163 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 DKK2Q9UBU2 259 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 FAM236AA0A1B0GUQ0 79 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 FAM236BA0A1B0GV22 79 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 hADV29S1A0JD25 119 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 TCRAP04437 139 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 IFI27P40305 119 aaPredicted RBP2.84□□□□□ -1.95
SYNE1-201ENST00000341594 FAM236DA0A1B0GTK5 79 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 NDUFB8O95169 186 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 FAM236CP0DP71 79 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 C8orf49Q96NF6 230 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 LHFPL6Q9Y693 200 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 RBAKDNA6NC62 111 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 SPACA3Q8IXA5 215 aa2.84□□□□□ -1.95
SYNE1-201ENST00000341594 RPL35AP18077 110 aaKnown RBP2.84□□□□□ -1.96
SYNE1-201ENST00000341594 EDN2P20800 178 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 ZNF818PQ6ZRF7 136 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 CRIPAKQ8N1N5 446 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 IGHV1OR15-9A0A0B4J2B8 117 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 PINLYPA6NC86 204 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 TMEM14BQ9NUH8 114 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 Q8N1Y9 231 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 LIME1Q9H400 295 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 BPTFQ12830 3046 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 CCL8P80075 99 aa2.84□□□□□ -1.96
SYNE1-201ENST00000341594 PRR3P79522 188 aaKnown RBP2.84□□□□□ -1.96
SYNE1-201ENST00000341594 GAS8-AS1O95177 125 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 ACANP16112 2415 aa2.83□□□□□ -1.96
SYNE1-201ENST00000341594 D6R8Y8 96 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms