RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 LOC107984156A0A0G2JMH3 177 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 AZU1P20160 251 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 SAMD13Q5VXD3 122 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 ARL17AQ8IVW1 177 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 Q8N8P6 123 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 POLQO75417 2590 aa12.38□□□□□ -0.43
SCARB1-202ENST00000339570 LY6EQ16553 131 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 MSRB2Q9Y3D2 182 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 CELSR2Q9HCU4 2923 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 APOMO95445 188 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 SAA4P35542 130 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
SCARB1-202ENST00000339570 KLHL30-AS1Q8NEE0 82 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 C2CD3Q4AC94 2353 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 NACAE9PAV3 2078 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 IGKV3-20P01619 116 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 ATP5G2Q06055 141 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 CCDC144NLQ6NUI1 221 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 BRD3OSQ6XYD6 125 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 DPF1Q92782 380 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 CCDC140Q96MF4 163 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 METTL26Q96S19 204 aa12.37□□□□□ -0.43
SCARB1-202ENST00000339570 RNASE4P34096 147 aaKnown RBP12.36□□□□□ -0.43
SCARB1-202ENST00000339570 LY6G5BQ8NDX9 201 aa12.36□□□□□ -0.43
SCARB1-202ENST00000339570 ZNF418Q8TF45 676 aaPredicted RBP12.36□□□□□ -0.43
SCARB1-202ENST00000339570 SRSF8Q9BRL6 282 aaKnown RBP12.36□□□□□ -0.43
SCARB1-202ENST00000339570 IGLL5B9A064 214 aa12.36□□□□□ -0.43
SCARB1-202ENST00000339570 SIVA1O15304 175 aa12.36□□□□□ -0.43
SCARB1-202ENST00000339570 C12orf74Q32Q52 190 aa12.36□□□□□ -0.43
SCARB1-202ENST00000339570 OR11H12B2RN74 326 aa12.35□□□□□ -0.43
SCARB1-202ENST00000339570 GNRH2O43555 120 aa12.35□□□□□ -0.43
SCARB1-202ENST00000339570 SRSF9Q13242 221 aaKnown RBP eCLIP12.35□□□□□ -0.43
SCARB1-202ENST00000339570 OR11H1Q8NG94 326 aa12.35□□□□□ -0.43
SCARB1-202ENST00000339570 OR11H2Q8NH07 326 aa12.35□□□□□ -0.43
SCARB1-202ENST00000339570 SETD2Q9BYW2 2564 aaPredicted RBP12.35□□□□□ -0.43
SCARB1-202ENST00000339570 TRAV8-2A0A0B4J237 113 aa12.35□□□□□ -0.43
SCARB1-202ENST00000339570 ATP5LO75964 103 aa12.35□□□□□ -0.43
SCARB1-202ENST00000339570 Q5PR19 223 aa12.35□□□□□ -0.43
SCARB1-202ENST00000339570 PHLDA3Q9Y5J5 127 aa12.35□□□□□ -0.43
SCARB1-202ENST00000339570 A0A1B0GWB2 263 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 ZFAND3Q9H8U3 227 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 CLPSL1A2RUU4 121 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 ODF3BA8MYP8 253 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 LINC01559Q495D7 138 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 C20orf173Q96LM9 149 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 JPT2Q9H910 190 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 CHTOPQ9Y3Y2 248 aaKnown RBP12.34□□□□□ -0.43
SCARB1-202ENST00000339570 IGHV7-4-1A0A0J9YVY3 117 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 F5H697 171 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 NRACQ8N912 160 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 HLA-DRB4X5D2U9 266 aa12.34□□□□□ -0.43
SCARB1-202ENST00000339570 SRSF1Q07955 248 aaKnown RBP eCLIP12.33□□□□□ -0.442e-6■■□□□ 11.8
SCARB1-202ENST00000339570 UNQ9165/PRO28630Q6UXU0 137 aa12.33□□□□□ -0.44
SCARB1-202ENST00000339570 MRPL16Q9NX20 251 aaKnown RBP12.33□□□□□ -0.44
SCARB1-202ENST00000339570 RAXQ9Y2V3 346 aa12.33□□□□□ -0.44
SCARB1-202ENST00000339570 H7C2G1 150 aa12.32□□□□□ -0.44
SCARB1-202ENST00000339570 FAM74A4Q5TZK3 123 aa12.32□□□□□ -0.44
SCARB1-202ENST00000339570 IGHV3-64A0A075B6Q5 118 aa12.32□□□□□ -0.44
SCARB1-202ENST00000339570 A0A1W2PPR1 153 aa12.32□□□□□ -0.44
SCARB1-202ENST00000339570 PGPEP1Q9NXJ5 209 aa12.32□□□□□ -0.44
SCARB1-202ENST00000339570 A0A087WWL8 130 aa12.32□□□□□ -0.44
SCARB1-202ENST00000339570 IGLV2-18A0A075B6J9 118 aa12.31□□□□□ -0.44
SCARB1-202ENST00000339570 A0A087WX48 190 aa12.31□□□□□ -0.44
SCARB1-202ENST00000339570 ZNF815PA8K554 130 aa12.31□□□□□ -0.44
SCARB1-202ENST00000339570 SLC25A16P16260 332 aa12.31□□□□□ -0.44
SCARB1-202ENST00000339570 PTH2Q96A98 100 aa12.31□□□□□ -0.44
SCARB1-202ENST00000339570 PSMB2P49721 201 aa12.31□□□□□ -0.44
SCARB1-202ENST00000339570 TCF15Q12870 199 aa12.31□□□□□ -0.44
SCARB1-202ENST00000339570 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
SCARB1-202ENST00000339570 PLEKHB2Q96CS7 222 aa12.31□□□□□ -0.44
SCARB1-202ENST00000339570 TLN2Q9Y4G6 2542 aa12.31□□□□□ -0.44
SCARB1-202ENST00000339570 M0R1W7 72 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 ANXA2RQ3ZCQ2 193 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 GAGE13Q4V321 117 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 EEF1AKMT3Q96AZ1 226 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 SMIM2Q9BVW6 85 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 BPESC1Q9GZL8 116 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 UTP20O75691 2785 aaKnown RBP12.3□□□□□ -0.44
SCARB1-202ENST00000339570 EDN2P20800 178 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 SPAG8Q99932 426 aaPredicted RBP12.3□□□□□ -0.44
SCARB1-202ENST00000339570 PRADC1Q9BSG0 188 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 ZMAT4Q9H898 229 aa12.3□□□□□ -0.44
SCARB1-202ENST00000339570 LINC01549A6NIU2 74 aa12.29□□□□□ -0.44
SCARB1-202ENST00000339570 C2orf66Q6UXQ4 117 aa12.29□□□□□ -0.44
SCARB1-202ENST00000339570 SLC50A1Q9BRV3 221 aa12.29□□□□□ -0.44
SCARB1-202ENST00000339570 IGF2-ASQ6U949 168 aa12.29□□□□□ -0.44
SCARB1-202ENST00000339570 FAM110DQ8TAY7 271 aaPredicted RBP12.29□□□□□ -0.44
SCARB1-202ENST00000339570 SIGMAR1Q99720 223 aa12.29□□□□□ -0.44
SCARB1-202ENST00000339570 GAGE12HA6NDE8 117 aa12.29□□□□□ -0.44
SCARB1-202ENST00000339570 SUMO2P61956 95 aaKnown RBP12.29□□□□□ -0.44
SCARB1-202ENST00000339570 RPL39P62891 51 aaKnown RBP12.29□□□□□ -0.44
SCARB1-202ENST00000339570 H7C1H1 209 aa12.28□□□□□ -0.44
SCARB1-202ENST00000339570 DUSP14O95147 198 aaKnown RBP12.28□□□□□ -0.44
SCARB1-202ENST00000339570 HTN1P15515 57 aa12.28□□□□□ -0.44
SCARB1-202ENST00000339570 MYO9AB2RTY4 2548 aa12.28□□□□□ -0.44
SCARB1-202ENST00000339570 CACNA1AO00555 2505 aa12.28□□□□□ -0.44
SCARB1-202ENST00000339570 ZFP2Q6ZN57 461 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms