RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 BIN3Q9NQY0 253 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 DKK2Q9UBU2 259 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 GNRH2O43555 120 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 ORM1P02763 201 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 CRIP1P50238 77 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 ZNF415Q09FC8 603 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 ZNF674Q2M3X9 581 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 CENPWQ5EE01 88 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 IBA57Q5T440 356 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 NHLRC2Q8NBF2 726 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 DAZAP1Q96EP5 407 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 NOP10Q9NPE3 64 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 GSN-AS1Q9NRJ2 163 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 TP53TG3Q9ULZ0 132 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 TGP01266 2768 aa8.53□□□□□ -1.04
SPTLC1-202ENST00000337841 C3orf84H3BNL1 204 aa8.52□□□□□ -1.05
SPTLC1-202ENST00000337841 SH2D1AO60880 128 aa8.52□□□□□ -1.05
SPTLC1-202ENST00000337841 SRP19P09132 144 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-202ENST00000337841 MGST1P10620 155 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-202ENST00000337841 NANOS2P60321 138 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-202ENST00000337841 DAD1P61803 113 aa8.52□□□□□ -1.05
SPTLC1-202ENST00000337841 DAZ2Q13117 558 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-202ENST00000337841 SPXQ9BT56 116 aa8.52□□□□□ -1.05
SPTLC1-202ENST00000337841 PARLQ9H300 379 aa8.52□□□□□ -1.05
SPTLC1-202ENST00000337841 PLAC8L1A1L4L8 177 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 B4DEV8 164 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 C9JCJ5 164 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 DEFB130BP0DP73 79 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 DEFB130AP0DP74 79 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 TCL1AP56279 114 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 C12orf74Q32Q52 190 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 PRR27Q6MZM9 219 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 C11orf72Q8NBR9 251 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 MDFICQ9P1T7 246 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 C11orf21Q9P2W6 132 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
SPTLC1-202ENST00000337841 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
SPTLC1-202ENST00000337841 ZNF727A8MUV8 499 aa8.5□□□□□ -1.05
SPTLC1-202ENST00000337841 TYMSP04818 313 aa8.5□□□□□ -1.05
SPTLC1-202ENST00000337841 S100A4P26447 101 aaKnown RBP8.5□□□□□ -1.05
SPTLC1-202ENST00000337841 OR5I1Q13606 314 aa8.5□□□□□ -1.05
SPTLC1-202ENST00000337841 FAM74A3Q4VXF1 159 aa8.5□□□□□ -1.05
SPTLC1-202ENST00000337841 OCC1Q8TAD7 63 aa8.5□□□□□ -1.05
SPTLC1-202ENST00000337841 SMIM7Q9BQ49 75 aa8.5□□□□□ -1.05
SPTLC1-202ENST00000337841 TRAV10A0A0B4J240 114 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 IGKV3D-20A0A0C4DH25 116 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 KRBOX1C9JBD0 128 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 M0R036 132 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 IGLV2-8P01709 118 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 ASIPP42127 132 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 LGALS9BQ3B8N2 356 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 PHLDA1Q8WV24 401 aaPredicted RBP8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 LY96Q9Y6Y9 160 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 HUWE1Q7Z6Z7 4374 aaKnown RBP8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 TENM3Q9P273 2699 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 COL7A1Q02388 2944 aa8.49□□□□□ -1.05
SPTLC1-202ENST00000337841 TRBV20OR9-2A0A075B6H5 130 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 TRGV1A0A0A0MS02 117 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 SPINK4O60575 86 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 GAGE7O76087 117 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 GAGE12FP0CL80 117 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 GAGE12GP0CL81 117 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 GAGE12IP0CL82 117 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 RPS20P60866 119 aaKnown RBP8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 SRSF3P84103 164 aaKnown RBP8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 SOHLH1Q5JUK2 328 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 ZFAND6Q6FIF0 208 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 CEMP1Q6PRD7 247 aaPredicted RBP8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 Q6ZTC4 211 aa8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 KLK5Q9Y337 293 aaPredicted RBP8.48□□□□□ -1.05
SPTLC1-202ENST00000337841 TRGV2A0A075B6R0 118 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 TMSB15BA0A087X1C1 80 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 DEFB131BA0A096LNP1 70 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 GRIFINA4D1Z8 144 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 NUPR2A6NF83 97 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 PGPEP1LA6NFU8 196 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 C9JQL5 133 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 M0R2P5 195 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 P01737 135 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 ATP5G1P05496 136 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 DNLZQ5SXM8 178 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 Q6ZTI0 123 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 LINC00612Q8N6U2 182 aa8.47□□□□□ -1.05
SPTLC1-202ENST00000337841 STAB2Q8WWQ8 2551 aa8.46□□□□□ -1.05
SPTLC1-202ENST00000337841 XKRY2A2RUG3 117 aa8.46□□□□□ -1.06
SPTLC1-202ENST00000337841 C19orf71A6NCJ1 209 aa8.46□□□□□ -1.06
SPTLC1-202ENST00000337841 HTN3P15516 51 aa8.46□□□□□ -1.06
SPTLC1-202ENST00000337841 OR2D3Q8NGH3 330 aa8.46□□□□□ -1.06
SPTLC1-202ENST00000337841 RASL10AQ92737 203 aa8.46□□□□□ -1.06
SPTLC1-202ENST00000337841 PTH2Q96A98 100 aa8.46□□□□□ -1.06
SPTLC1-202ENST00000337841 MRPL16Q9NX20 251 aaKnown RBP8.46□□□□□ -1.06
SPTLC1-202ENST00000337841 CXCL1P09341 107 aa8.45□□□□□ -1.06
SPTLC1-202ENST00000337841 ARMS2P0C7Q2 107 aa8.45□□□□□ -1.06
SPTLC1-202ENST00000337841 UQCC3Q6UW78 93 aa8.45□□□□□ -1.06
SPTLC1-202ENST00000337841 NUDT10Q8NFP7 164 aa8.45□□□□□ -1.06
SPTLC1-202ENST00000337841 NUDT11Q96G61 164 aa8.45□□□□□ -1.06
SPTLC1-202ENST00000337841 C9orf85Q96MD7 179 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms