RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 OVOL2Q9BRP0 275 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 OBSL1O75147 1896 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 HLA-DMBP28068 263 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 BVES-AS1Q5T3Y7 98 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 MORN5Q5VZ52 161 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 GATD1Q8NB37 220 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 ZFAND6Q6FIF0 208 aa13.42□□□□□ -0.26
TRAPPC11-201ENST00000334690 IGLV1-47P01700 117 aa13.41□□□□□ -0.26
TRAPPC11-201ENST00000334690 ZNF493Q6ZR52 646 aa13.41□□□□□ -0.26
TRAPPC11-201ENST00000334690 SONP18583 2426 aaKnown RBP13.41□□□□□ -0.26
TRAPPC11-201ENST00000334690 IGHV7-81A0A0B4J1V7 117 aa13.41□□□□□ -0.26
TRAPPC11-201ENST00000334690 MAPK1IP1LQ8NDC0 245 aa13.41□□□□□ -0.26
TRAPPC11-201ENST00000334690 C9JAW5 83 aa13.41□□□□□ -0.26
TRAPPC11-201ENST00000334690 KMT2EQ8IZD2 1858 aa13.41□□□□□ -0.26
TRAPPC11-201ENST00000334690 NPSP0C0P6 89 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 PCNX3Q9H6A9 2034 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 IGKV1OR2-108A0A075B7D4 117 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 CDPF1Q6NVV7 123 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 TRAV12-2A0A075B6T6 113 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 DEFB130BP0DP73 79 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 DEFB130AP0DP74 79 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 IGFBPL1Q8WX77 278 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 IGF2BP2-AS1Q96M15 143 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 GTSF1LQ9H1H1 148 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 PTPN13Q12923 2485 aa13.4□□□□□ -0.26
TRAPPC11-201ENST00000334690 LGALS1P09382 135 aaKnown RBP13.39□□□□□ -0.27
TRAPPC11-201ENST00000334690 SS18Q15532 418 aa13.39□□□□□ -0.27
TRAPPC11-201ENST00000334690 P0C879 139 aa13.39□□□□□ -0.27
TRAPPC11-201ENST00000334690 KLF12Q9Y4X4 402 aa13.39□□□□□ -0.27
TRAPPC11-201ENST00000334690 MED12LQ86YW9 2145 aa13.39□□□□□ -0.27
TRAPPC11-201ENST00000334690 PIEZO1Q92508 2521 aa13.39□□□□□ -0.27
TRAPPC11-201ENST00000334690 CTSGP08311 255 aa13.39□□□□□ -0.27
TRAPPC11-201ENST00000334690 ODF3L1Q8IXM7 274 aa13.38□□□□□ -0.27
TRAPPC11-201ENST00000334690 MSMPQ1L6U9 139 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 DKK2Q9UBU2 259 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 TRAV8-3A0A0A6YYJ7 113 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 GAGE12JA6NER3 117 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 NUPR1O60356 82 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 GAGE4Q13068 117 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 GAGE5Q13069 117 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 C11orf68Q9H3H3 251 aaKnown RBP13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 FOXE3Q13461 319 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 RITA1Q96K30 269 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 NCKAP5O14513 1909 aa13.37□□□□□ -0.27
TRAPPC11-201ENST00000334690 TRBV25-1A0A075B6N4 114 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 K7EP34 96 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 TCF15Q12870 199 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 K7EP13 123 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 BUB3O43684 328 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 AZU1P20160 251 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 ETDBQ3ZM63 59 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 CFHR4Q92496 578 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 ZNF625Q96I27 306 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 NDUFA12Q9UI09 145 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 ALPK3Q96L96 1907 aa13.36□□□□□ -0.27
TRAPPC11-201ENST00000334690 IGHV3-16A0A0C4DH30 117 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 MAJINQ3KP22 176 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 Q96MF0 132 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 F8W1H4 67 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 IGLV2-23P01705 113 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 CRIP3Q6Q6R5 217 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 ZNRF2Q8NHG8 242 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 TMEM131Q92545 1883 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 J3QQQ9 107 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 CRYGCP07315 174 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 FOXI2Q6ZQN5 318 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 DENND4AQ7Z401 1863 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 CGB3P0DN86 165 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 CGB7P0DN87 165 aa13.35□□□□□ -0.27
TRAPPC11-201ENST00000334690 A0A1W2PPM0 123 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 TEX22C9J3V5 150 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 F6UB75 175 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 Q6ZPA2 131 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 CEND1Q8N111 149 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 Q8N9W7 124 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 DNAJC30Q96LL9 226 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 PRO1854Q9UHT4 67 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 ARHGAP21Q5T5U3 1957 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 KIAA1549LQ6ZVL6 1849 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 PROP1O75360 226 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 RHOHQ15669 191 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 TMEM243Q9BU79 118 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 VPREB3Q9UKI3 123 aa13.34□□□□□ -0.27
TRAPPC11-201ENST00000334690 PRSS29PA6NIE9 313 aa13.33□□□□□ -0.28
TRAPPC11-201ENST00000334690 GNRH2O43555 120 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 DEFB112Q30KQ8 113 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 FBXL19-AS1Q494R0 122 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 SRCAPQ6ZRS2 3230 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 IGHV4-61A0A0C4DH41 118 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 IGHV4-59P01825 116 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 LINC01545Q5VT33 79 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 BOD1L2Q8IYS8 172 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 PPDPFLQ8WWR9 84 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 LINC00574Q9H8X3 128 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 MRPL36Q9P0J6 103 aaKnown RBP13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 E7EUB6 86 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 DEFB125Q8N687 156 aa13.32□□□□□ -0.28
TRAPPC11-201ENST00000334690 SPINK8P0C7L1 97 aa13.31□□□□□ -0.28
TRAPPC11-201ENST00000334690 WISP2O76076 250 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms